BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0115.0023.p (370 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_531015.1| molybdopterin dehydrogenase [Rhodopseudomonas p... 362 5e-98 ref|YP_002540531.1| oxidoreductase, molybdopterin-binding subuni... 354 1e-95 gb|AAQ21349.1| Csw007 [uncultured bacterium] 347 3e-93 ref|YP_002494966.1| FAD-binding molybdopterin dehydrogenase [Met... 346 4e-93 ref|YP_001767298.1| FAD-binding molybdopterin dehydrogenase [Met... 342 8e-92 >ref|YP_531015.1| molybdopterin dehydrogenase [Rhodopseudomonas palustris BisB18] gb|ABD86696.1| molybdopterin dehydrogenase, FAD-binding [Rhodopseudomonas palustris BisB18] Length = 316 Score = 362 bits (930), Expect = 5e-98, Method: Compositional matrix adjust. Identities = 205/356 (57%), Positives = 235/356 (66%), Gaps = 55/356 (15%) Query: 1 MMNFDYVRPASVADAIAAASE-KGASYLASGTNLLDLMKGGVSRPSLLVDVTRLPGLDRI 59 M F Y RP S A A AAA+ GA ++A GTNLLDLMK + P L+DV RL GLD+I Sbjct: 1 MKPFSYERPNSPAAAAAAAARVDGAKFVAGGTNLLDLMKLQIETPKHLIDVNRL-GLDKI 59 Query: 60 EHLAXARPDEARDRDAGASDRRQRPGARPHRGDRGRRPADRRAGAQHRSRRRYTRAARLW 119 E SD R GA Sbjct: 60 E---------------ATSDGGLRIGA--------------------------------- 71 Query: 120 RAXGALVRNADLAHDAEFARNYPAVAEALLSGASAQLRNAATVGGNLMQRTRCAYFYDAG 179 LVRN DLA D R+Y ++ ALL+GA+ QLRN AT GNL+QRTRC YFYD Sbjct: 72 -----LVRNTDLAADHTVRRDYAVLSRALLAGANGQLRNQATTAGNLLQRTRCPYFYDTN 126 Query: 180 SACNRRWPGAGCDALKGENRLHAVLGWSEGCIATHPSDMAVAMRALDATVETVRPDGTTR 239 CN+R PG+GC AL G +R HA++G S+ CIATHPSDMAVAMR LDATVETV G R Sbjct: 127 QPCNKRRPGSGCGALHGFSRQHAIVGVSDACIATHPSDMAVAMRLLDATVETVSAGGAER 186 Query: 240 SIPIAELRRLPGDSPEIETSLEPGELITAVVLPKPVGGAQAYRKVRDRASYAFALVSVAA 299 IPIA+L RLPGD+P+IETSL PGELITAV LPKP+GG Q YRKVRDRAS+AFALVSVAA Sbjct: 187 RIPIADLHRLPGDTPQIETSLNPGELITAVTLPKPLGGKQIYRKVRDRASFAFALVSVAA 246 Query: 300 IVQRDGTGRVALGGVAHKPWRVEAAEAELPAGAKAVTARLFADAKPTKDNAYKLPL 355 IVQRDG+GRVALGGVAHKPWRVEAA++E+P GAKAVTA+L ADA+PT+ NAYK PL Sbjct: 247 IVQRDGSGRVALGGVAHKPWRVEAADSEMPRGAKAVTAQLLADARPTEQNAYKRPL 302 >ref|YP_002540531.1| oxidoreductase, molybdopterin-binding subunit [Agrobacterium radiobacter K84] gb|ACM28936.1| oxidoreductase, molybdopterin-binding subunit [Agrobacterium radiobacter K84] Length = 316 Score = 354 bits (908), Expect = 1e-95, Method: Compositional matrix adjust. Identities = 201/356 (56%), Positives = 232/356 (65%), Gaps = 55/356 (15%) Query: 1 MMNFDYVRPASV-ADAIAAASEKGASYLASGTNLLDLMKGGVSRPSLLVDVTRLPGLDRI 59 M F Y R +SV A A AAA KGA ++A GTNLLDLMK + P+ L+DV L LD+I Sbjct: 1 MKAFSYERASSVEAAAKAAAGTKGAKFIAGGTNLLDLMKLQIETPTHLIDVNGL-ALDKI 59 Query: 60 EHLAXARPDEARDRDAGASDRRQRPGARPHRGDRGRRPADRRAGAQHRSRRRYTRAARLW 119 E A P G R Sbjct: 60 E-------------------------ATPEGGLR-------------------------- 68 Query: 120 RAXGALVRNADLAHDAEFARNYPAVAEALLSGASAQLRNAATVGGNLMQRTRCAYFYDAG 179 GALVRN DLA D R+Y ++ ALL+GAS QLRN AT GNL+QRTRC YFYD Sbjct: 69 --IGALVRNTDLASDERVRRDYGLLSRALLAGASGQLRNKATTAGNLLQRTRCPYFYDTN 126 Query: 180 SACNRRWPGAGCDALKGENRLHAVLGWSEGCIATHPSDMAVAMRALDATVETVRPDGTTR 239 CN+R PG+GC A+ G +R HAV+G S+ CIATHPSDMA+AMRALDATVETVRPDG TR Sbjct: 127 QPCNKRQPGSGCAAIGGFSRQHAVIGVSDACIATHPSDMAIAMRALDATVETVRPDGATR 186 Query: 240 SIPIAELRRLPGDSPEIETSLEPGELITAVVLPKPVGGAQAYRKVRDRASYAFALVSVAA 299 IPIA+ RLPGD+P +ET LEPGELITAV LPKP+GG YRKVRDRASYAFALVS+ A Sbjct: 187 RIPIADFHRLPGDTPHVETVLEPGELITAVTLPKPIGGKHIYRKVRDRASYAFALVSIGA 246 Query: 300 IVQRDGTGRVALGGVAHKPWRVEAAEAELPAGAKAVTARLFADAKPTKDNAYKLPL 355 IVQ DGTGRVA+GG+AHKPWRVEAAEA+LP GA+AVT L A A PT+ NA+K+ L Sbjct: 247 IVQPDGTGRVAVGGIAHKPWRVEAAEADLPKGARAVTDTLLAGAHPTEQNAFKVTL 302 >gb|AAQ21349.1| Csw007 [uncultured bacterium] Length = 441 Score = 347 bits (889), Expect = 3e-93, Method: Compositional matrix adjust. Identities = 188/336 (55%), Positives = 220/336 (65%), Gaps = 54/336 (16%) Query: 21 EKGASYLASGTNLLDLMKGGVSRPSLLVDVTRLPGLDRIEHLAXARPDEARDRDAGASDR 80 + GA ++A GTNLLDLMK + P+ LVDV L LD+IE Sbjct: 147 QPGAKFIAGGTNLLDLMKLQIEAPAHLVDVNGLK-LDKIE-------------------- 185 Query: 81 RQRPGARPHRGDRGRRPADRRAGAQHRSRRRYTRAARLWRAXGALVRNADLAHDAEFARN 140 A P G R GALVRN DLA DA R+ Sbjct: 186 -----ATPEGGLR----------------------------IGALVRNTDLAADARVRRD 212 Query: 141 YPAVAEALLSGASAQLRNAATVGGNLMQRTRCAYFYDAGSACNRRWPGAGCDALKGENRL 200 Y ++ ALL+GASAQLRN AT GNL+QRTRC YFYD CN+R PG+GC A+ G R Sbjct: 213 YAVLSRALLAGASAQLRNKATTAGNLLQRTRCPYFYDTDQPCNKRKPGSGCGAIGGVTRQ 272 Query: 201 HAVLGWSEGCIATHPSDMAVAMRALDATVETVRPDGTTRSIPIAELRRLPGDSPEIETSL 260 HAV+G S+ CIATHPSDMAVAMR LDA +ETVRPDG TR IPIA+ RLPGD+PE+ET+L Sbjct: 273 HAVIGASQACIATHPSDMAVAMRLLDAGIETVRPDGATRVIPIADFHRLPGDTPEVETAL 332 Query: 261 EPGELITAVVLPKPVGGAQAYRKVRDRASYAFALVSVAAIVQRDGTGRVALGGVAHKPWR 320 E GELITAV LPKP+GG YRKVRDRASYAFALVSVAA++Q G+GRVALGGVAHKPWR Sbjct: 333 EAGELITAVTLPKPLGGTHIYRKVRDRASYAFALVSVAAVIQPGGSGRVALGGVAHKPWR 392 Query: 321 VEAAEAELPAGAKAVTARLFADAKPTKDNAYKLPLA 356 +EAAE+ +P GA V A+L A A+PT DNA+K+ LA Sbjct: 393 LEAAESAMPQGASGVMAQLLAGAQPTHDNAFKIVLA 428 >ref|YP_002494966.1| FAD-binding molybdopterin dehydrogenase [Methylobacterium nodulans ORS 2060] gb|ACL62474.1| molybdopterin dehydrogenase FAD-binding [Methylobacterium nodulans ORS 2060] Length = 316 Score = 346 bits (887), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 200/366 (54%), Positives = 234/366 (63%), Gaps = 55/366 (15%) Query: 1 MMNFDYVRPASVADAIAAASEK-GASYLASGTNLLDLMKGGVSRPSLLVDVTRLPGLDRI 59 M +F Y RP++ A+A AA + GA ++A GTNLLDLMK + P+ LVDV L LDRI Sbjct: 1 MRSFTYERPSTPAEAAAAVARTPGAKFIAGGTNLLDLMKLQIETPTHLVDVNGL-SLDRI 59 Query: 60 EHLAXARPDEARDRDAGASDRRQRPGARPHRGDRGRRPADRRAGAQHRSRRRYTRAARLW 119 E P G R GA R+ Sbjct: 60 E-------------------------PTPEGG--------LRIGALMRN----------- 75 Query: 120 RAXGALVRNADLAHDAEFARNYPAVAEALLSGASAQLRNAATVGGNLMQRTRCAYFYDAG 179 DLA D ++Y ++ ALL+GAS QLRN AT GNLMQRTRC YFYD Sbjct: 76 ---------TDLAADPRVRKDYAVLSRALLAGASGQLRNKATTAGNLMQRTRCPYFYDTA 126 Query: 180 SACNRRWPGAGCDALKGENRLHAVLGWSEGCIATHPSDMAVAMRALDATVETVRPDGTTR 239 CN+R PG+GC AL G +R AV+G S+ CIAT+PSDMAVAMR LDATVETV G R Sbjct: 127 QPCNKRQPGSGCSALDGVSRQLAVIGGSDACIATNPSDMAVAMRVLDATVETVDAKGAER 186 Query: 240 SIPIAELRRLPGDSPEIETSLEPGELITAVVLPKPVGGAQAYRKVRDRASYAFALVSVAA 299 +IP+AE RLPGD+PE++T+L+PGELITAV LPKP+GGAQ YRKVRDRASYAFALVSVAA Sbjct: 187 TIPMAEFHRLPGDTPEVDTTLKPGELITAVTLPKPLGGAQVYRKVRDRASYAFALVSVAA 246 Query: 300 IVQRDGTGRVALGGVAHKPWRVEAAEAELPAGAKAVTARLFADAKPTKDNAYKLPLAXNA 359 +VQ DGTGRVA GG+AHKPWRVEAAEA+LP GAKAV ARL AKPT DNA+KL LA Sbjct: 247 VVQPDGTGRVAFGGLAHKPWRVEAAEADLPRGAKAVAARLLDGAKPTHDNAFKLKLAERT 306 Query: 360 GGGAAR 365 G A + Sbjct: 307 LGAALK 312 >ref|YP_001767298.1| FAD-binding molybdopterin dehydrogenase [Methylobacterium sp. 4-46] gb|ACA14864.1| molybdopterin dehydrogenase FAD-binding [Methylobacterium sp. 4-46] Length = 316 Score = 342 bits (876), Expect = 8e-92, Method: Compositional matrix adjust. Identities = 201/366 (54%), Positives = 234/366 (63%), Gaps = 55/366 (15%) Query: 1 MMNFDYVRPASVADAIAAASEK-GASYLASGTNLLDLMKGGVSRPSLLVDVTRLPGLDRI 59 M +F Y RPAS A+A +A + GA ++A GTNLLDLMK + P+ LVDV L GLD I Sbjct: 1 MKSFTYERPASPAEAASAVARNPGAKFIAGGTNLLDLMKLQIETPAHLVDVNGL-GLDAI 59 Query: 60 EHLAXARPDEARDRDAGASDRRQRPGARPHRGDRGRRPADRRAGAQHRSRRRYTRAARLW 119 E A P G R Sbjct: 60 E-------------------------ATPEGGLR-------------------------- 68 Query: 120 RAXGALVRNADLAHDAEFARNYPAVAEALLSGASAQLRNAATVGGNLMQRTRCAYFYDAG 179 GALVRN DLA D R+YP ++ ALL+GA+ QLRN AT GNL+QRTRC YFYD Sbjct: 69 --IGALVRNTDLAADPRVRRDYPVLSRALLAGATGQLRNQATTAGNLLQRTRCPYFYDTA 126 Query: 180 SACNRRWPGAGCDALKGENRLHAVLGWSEGCIATHPSDMAVAMRALDATVETVRPDGTTR 239 ACN+R PG+GC AL G +R AV+G SE CIATHP DMAVAMR LDA VETV G R Sbjct: 127 QACNKRRPGSGCAALDGISRQLAVIGGSEACIATHPGDMAVAMRVLDAAVETVDATGAAR 186 Query: 240 SIPIAELRRLPGDSPEIETSLEPGELITAVVLPKPVGGAQAYRKVRDRASYAFALVSVAA 299 +IPIAE RLPGD+PE +T+L P ELITAV LP+P+GGAQ YRKVRDRASYAFALVSVAA Sbjct: 187 TIPIAEFHRLPGDAPERDTTLRPDELITAVTLPRPLGGAQIYRKVRDRASYAFALVSVAA 246 Query: 300 IVQRDGTGRVALGGVAHKPWRVEAAEAELPAGAKAVTARLFADAKPTKDNAYKLPLAXNA 359 +VQ DG+GRVA GG+AHKPWRVEAAEAELP GA AV A + + A+PT+DNA+KL LA Sbjct: 247 VVQPDGSGRVAFGGLAHKPWRVEAAEAELPRGAAAVAAGMLSGARPTRDNAFKLRLAERT 306 Query: 360 GGGAAR 365 G A + Sbjct: 307 LGAALK 312