BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0115.0019.p (187 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001239560.1| hypothetical protein BBta_3562 [Bradyrhizobi... 282 1e-74 ref|YP_001205152.1| hypothetical protein BRADO3113 [Bradyrhizobi... 239 2e-61 ref|ZP_03502854.1| putative damage inducible protein [Rhizobium ... 206 2e-51 gb|EGE59373.1| hypothetical protein RHECNPAF_222004 [Rhizobium e... 205 3e-51 ref|YP_002977304.1| DinB family protein [Rhizobium leguminosarum... 205 3e-51 >ref|YP_001239560.1| hypothetical protein BBta_3562 [Bradyrhizobium sp. BTAi1] gb|ABQ35654.1| hypothetical protein BBta_3562 [Bradyrhizobium sp. BTAi1] Length = 187 Score = 282 bits (722), Expect = 1e-74, Method: Compositional matrix adjust. Identities = 132/185 (71%), Positives = 154/185 (83%) Query: 1 MQAGLVQTFRAFAYNNAWANHRLLTACAGLSQAEFAAARTGFFPSLQATLNHIHVIDLFY 60 M A LVQTFRAFAYNNAWANHRLLTAC LS +FAAARTGFFPSLQ TLNHI++IDLFY Sbjct: 1 MPADLVQTFRAFAYNNAWANHRLLTACGELSADDFAAARTGFFPSLQKTLNHIYIIDLFY 60 Query: 61 IDALEGGWLGPKAWANEVPYPSVAQLKDAQRAIDQRLIVHCDALTPERLEDIVKVNRDTS 120 IDALEGGWLGP AW NEVP+P ++ L AQ A+D+RLI C+ALTP RL++ V++NR++ Sbjct: 61 IDALEGGWLGPMAWQNEVPFPRLSDLVKAQSAMDRRLIAFCEALTPARLDETVRINRESR 120 Query: 121 VQTERRDRLLMHLFQHEIHHRGQAHAMLSETTVKPPQLDEFFAAGEAPLRAAEFRDLGWS 180 VQ ER DRLL+HLFQH+IHHRGQAHAMLS T+ KPPQLDEFF A +A LR +F +LG+S Sbjct: 121 VQNERCDRLLLHLFQHDIHHRGQAHAMLSATSTKPPQLDEFFPADDAALRTKDFAELGFS 180 Query: 181 EATVW 185 E VW Sbjct: 181 EEKVW 185 >ref|YP_001205152.1| hypothetical protein BRADO3113 [Bradyrhizobium sp. ORS 278] emb|CAL76915.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 164 Score = 239 bits (609), Expect = 2e-61, Method: Compositional matrix adjust. Identities = 112/162 (69%), Positives = 133/162 (82%) Query: 24 LTACAGLSQAEFAAARTGFFPSLQATLNHIHVIDLFYIDALEGGWLGPKAWANEVPYPSV 83 +TAC L AEFAA RTGFFPSLQ TLNHI++IDLFYIDALEGGWLGP AW NEVP+P + Sbjct: 1 MTACGQLGAAEFAAERTGFFPSLQKTLNHIYIIDLFYIDALEGGWLGPMAWQNEVPFPRL 60 Query: 84 AQLKDAQRAIDQRLIVHCDALTPERLEDIVKVNRDTSVQTERRDRLLMHLFQHEIHHRGQ 143 + L AQ A+D+RLI C+ LTP RL++ V++NR+T VQ ER DRLL+HLFQH+IHHRGQ Sbjct: 61 SDLVRAQGAMDRRLIDFCETLTPARLDETVRINRETRVQNERCDRLLLHLFQHDIHHRGQ 120 Query: 144 AHAMLSETTVKPPQLDEFFAAGEAPLRAAEFRDLGWSEATVW 185 AHAMLS T+VKPPQLDEFF A +A LRA +F +LG+SE VW Sbjct: 121 AHAMLSATSVKPPQLDEFFPADDAGLRAKDFAELGFSEEKVW 162 >ref|ZP_03502854.1| putative damage inducible protein [Rhizobium etli Kim 5] Length = 187 Score = 206 bits (523), Expect = 2e-51, Method: Compositional matrix adjust. Identities = 97/179 (54%), Positives = 124/179 (69%) Query: 6 VQTFRAFAYNNAWANHRLLTACAGLSQAEFAAARTGFFPSLQATLNHIHVIDLFYIDALE 65 V+ FR AYNNA AN RLL ACA L+ EF A RTGFFPS++ TLNHI +D FY+D LE Sbjct: 7 VRPFRKLAYNNALANRRLLQACAALTPGEFEAPRTGFFPSIKETLNHIVTVDWFYVDGLE 66 Query: 66 GGWLGPKAWANEVPYPSVAQLKDAQRAIDQRLIVHCDALTPERLEDIVKVNRDTSVQTER 125 GG LG +A+ + P+ V+ L +AQ +DQRL+ C+ALTPE+L V ++R +Q ER Sbjct: 67 GGTLGFQAFEVDQPFDDVSSLAEAQAKVDQRLVALCEALTPEKLVSTVSLHRGDRIQQER 126 Query: 126 RDRLLMHLFQHEIHHRGQAHAMLSETTVKPPQLDEFFAAGEAPLRAAEFRDLGWSEATV 184 + +L HLFQH+ HHRGQ HAML+ T++ PPQLDEF A +A R E LGWSE T+ Sbjct: 127 MEDVLAHLFQHQTHHRGQVHAMLAGTSIAPPQLDEFIVADDAKFRGGELAGLGWSEETL 185 >gb|EGE59373.1| hypothetical protein RHECNPAF_222004 [Rhizobium etli CNPAF512] Length = 187 Score = 205 bits (521), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 99/179 (55%), Positives = 121/179 (67%) Query: 6 VQTFRAFAYNNAWANHRLLTACAGLSQAEFAAARTGFFPSLQATLNHIHVIDLFYIDALE 65 V+ FR AYNNA ANHRLL AC L EF A RTGFFPS++ TLNHI +D FY+D +E Sbjct: 7 VRVFRKLAYNNALANHRLLQACTALKPGEFEAPRTGFFPSIKETLNHIITVDWFYVDGME 66 Query: 66 GGWLGPKAWANEVPYPSVAQLKDAQRAIDQRLIVHCDALTPERLEDIVKVNRDTSVQTER 125 GG LG +A+ E P+ +A L AQ A+D RL C+AL+PE L V+++R +Q ER Sbjct: 67 GGTLGYQAFEIEEPFDDIASLSAAQAAVDLRLTALCEALSPEGLVSTVRLHRGDRIQEER 126 Query: 126 RDRLLMHLFQHEIHHRGQAHAMLSETTVKPPQLDEFFAAGEAPLRAAEFRDLGWSEATV 184 D +L HLFQH+ HHRGQ HAMLS T V PPQLDEF A +A R E +LGWSE T+ Sbjct: 127 MDDVLAHLFQHQTHHRGQVHAMLSGTGVAPPQLDEFIVADDARFRGKEVAELGWSEETL 185 >ref|YP_002977304.1| DinB family protein [Rhizobium leguminosarum bv. trifolii WSM1325] gb|ACS57765.1| DinB family protein [Rhizobium leguminosarum bv. trifolii WSM1325] Length = 187 Score = 205 bits (521), Expect = 3e-51, Method: Compositional matrix adjust. Identities = 99/179 (55%), Positives = 122/179 (68%) Query: 6 VQTFRAFAYNNAWANHRLLTACAGLSQAEFAAARTGFFPSLQATLNHIHVIDLFYIDALE 65 V+ FR AYNNA AN RLL ACA L +EF A RT FFPS++ TLNHI +D FY+D LE Sbjct: 7 VRPFRKLAYNNALANRRLLQACATLKPSEFEAPRTSFFPSIKETLNHIITVDWFYVDGLE 66 Query: 66 GGWLGPKAWANEVPYPSVAQLKDAQRAIDQRLIVHCDALTPERLEDIVKVNRDTSVQTER 125 GG LG KA+ + P+ V+ L +AQ +DQRL C+ALTPERL + ++R +Q ER Sbjct: 67 GGTLGLKAFEVDEPFDDVSSLTEAQAKVDQRLTALCEALTPERLISTISLHRGDRIQEER 126 Query: 126 RDRLLMHLFQHEIHHRGQAHAMLSETTVKPPQLDEFFAAGEAPLRAAEFRDLGWSEATV 184 + +L HLFQH+ HHRGQ HAMLS T+V PPQLDEF A +A R E LGWSE T+ Sbjct: 127 MEDVLGHLFQHQTHHRGQVHAMLSGTSVAPPQLDEFIVADDARFRGGELATLGWSEETL 185