BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0115.0016.p         (124 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ACN58758.1| protein of unknown function DUF1330 [uncultured b...    65   3e-09
ref|YP_004753649.1| hypothetical protein CFU_3001 [Collimonas fu...    58   4e-07
ref|YP_004682137.1| hypothetical protein CNE_2c19520 [Cupriavidu...    55   4e-06
ref|ZP_08862592.1| hypothetical protein RTW15_16529 [Ruegeria sp...    55   5e-06
ref|ZP_03395058.1| hypothetical protein PSPTOT1_2286 [Pseudomona...    54   1e-05

>gb|ACN58758.1| protein of unknown function DUF1330 [uncultured bacterium BLR8]
          Length = 95

 Score = 65.1 bits (157), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/99 (39%), Positives = 56/99 (56%), Gaps = 8/99 (8%)

Query: 23  AYLIGQIEVTDPDGYARDYLPQAKEIIKAHGGKLIAAAGAAATGSQVVAVDGNP-PKRVV 81
           AYLI ++E+TDP  Y  +Y  Q   +I A+GG+ +   G+         ++G P P RVV
Sbjct: 3   AYLIVEVELTDPAAY-EEYRRQVPPMIAAYGGRYLVRGGSTKL------LEGGPAPARVV 55

Query: 82  IYMYPSMDALWAWRHDPAYVQVRAVGEKYARYHTFAVEG 120
           +  +PSM+ L A+   P YVQV+ +    AR   FAVEG
Sbjct: 56  VLEFPSMERLRAFYDSPEYVQVKHIRVNAARTRMFAVEG 94


>ref|YP_004753649.1| hypothetical protein CFU_3001 [Collimonas fungivorans Ter331]
 gb|AEK62826.1| hypothetical protein CFU_3001 [Collimonas fungivorans Ter331]
          Length = 130

 Score = 58.2 bits (139), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 52/104 (50%), Gaps = 8/104 (7%)

Query: 18  EARPPAYLIGQIEVTDPDGYARDYLPQAKEIIKAHGGKLIAAAGAAATGSQVVAVDGNPP 77
           EA  PAY +   EVTDP+G  + Y  Q +   K +GG+ I        G +V  ++G   
Sbjct: 31  EAARPAYYVADFEVTDPEGI-KPYSAQVESTFKPYGGRFIV------RGGKVTQLEGQAS 83

Query: 78  K-RVVIYMYPSMDALWAWRHDPAYVQVRAVGEKYARYHTFAVEG 120
           + R+V+  + SMD   AW + PAY +++ +         F VEG
Sbjct: 84  RGRLVVIAFDSMDKAQAWYNSPAYEKLKPIRHNSGESRVFIVEG 127


>ref|YP_004682137.1| hypothetical protein CNE_2c19520 [Cupriavidus necator N-1]
 gb|AEI80905.1| hypothetical protein CNE_2c19520 [Cupriavidus necator N-1]
          Length = 100

 Score = 54.7 bits (130), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 40/104 (38%), Positives = 58/104 (55%), Gaps = 12/104 (11%)

Query: 23  AYLIGQIEVTDP---DGYARDYLPQAKEIIKAHGGKLIAAAGAAATGSQVVAVDGNPPKR 79
           AYLI  ++VTDP   + Y RD +P A E+   +GGK +   G     ++V+  D  P  R
Sbjct: 3   AYLIADVDVTDPAVFEEYKRD-VP-ATEV--RYGGKYLGRGGP----TKVLEGDWQP-HR 53

Query: 80  VVIYMYPSMDALWAWRHDPAYVQVRAVGEKYARYHTFAVEGSVA 123
           +VI  +P MDAL AW   P Y +++A+ E+ A     A+EG  A
Sbjct: 54  LVIVEFPDMDALMAWYDSPEYARLKAIRERCATTRIIALEGVAA 97


>ref|ZP_08862592.1| hypothetical protein RTW15_16529 [Ruegeria sp. TW15]
          Length = 96

 Score = 54.7 bits (130), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 7/99 (7%)

Query: 23  AYLIGQIEVTDPDGYARDYLPQAKEIIKAHGGKLIAAAGAAATGSQVVAVDGNPPKRVVI 82
           AY I QI + DPDGY + YL     I   HGG+L+       +   V  ++G+  +  ++
Sbjct: 3   AYFIAQISIHDPDGYQK-YLEGFMPIFDRHGGRLLTI-----SSKPVEVIEGSWAEDGIV 56

Query: 83  YM-YPSMDALWAWRHDPAYVQVRAVGEKYARYHTFAVEG 120
            M +P M A  AW+ DP YV++  + ++ A  +   VEG
Sbjct: 57  LMEFPDMAAANAWKDDPDYVELAKIRQQTATANLVLVEG 95


>ref|ZP_03395058.1| hypothetical protein PSPTOT1_2286 [Pseudomonas syringae pv. tomato
           T1]
 ref|ZP_07230008.1| hypothetical protein PsyrptM_03100 [Pseudomonas syringae pv. tomato
           Max13]
 ref|ZP_07253598.1| hypothetical protein PsyrptK_18896 [Pseudomonas syringae pv. tomato
           K40]
 ref|ZP_07257887.1| hypothetical protein PsyrptN_10932 [Pseudomonas syringae pv. tomato
           NCPPB 1108]
 gb|EEB61775.1| hypothetical protein PSPTOT1_2286 [Pseudomonas syringae pv. tomato
           T1]
          Length = 131

 Score = 53.5 bits (127), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/125 (27%), Positives = 60/125 (48%), Gaps = 10/125 (8%)

Query: 1   MLGCTAIGALGSEALHGEARPPAYLIGQIEVTDPDGYARDYLPQAKEIIKAHGGKLIAAA 60
               T+   + SEA   E   PAY + + E+TD +G  + Y  Q +   K +GG  I   
Sbjct: 16  FFAATSGLVIASEA--KEETRPAYYVAEFEITDAEG-MKPYSAQVESTFKPYGGHFIV-- 70

Query: 61  GAAATGSQVVAVDGNPPKRV-VIYMYPSMDALWAWRHDPAYVQVRAVGEKYARYHTFAVE 119
                G + ++++G  PKR  V+  + S++   AW +   Y ++R V ++ A+   + +E
Sbjct: 71  ----RGGKTISLEGTAPKRRRVVIEFASVEKAQAWYNSAEYTELRKVRQRSAKTDVYLIE 126

Query: 120 GSVAN 124
           G  A 
Sbjct: 127 GVSAQ 131