BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0114.0008.p (253 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_08628875.1| beta-lactamase-like protein [Bradyrhizobiacea... 350 1e-94 ref|YP_002825141.1| putative beta-lactamase-like protein [Sinorh... 272 3e-71 ref|NP_660009.1| beta-lactamase like protein [Rhizobium etli CFN... 267 1e-69 gb|AEJ26983.1| Putative beta-lactamase [Paracoccus denitrificans... 254 7e-66 ref|ZP_03524531.1| probable beta-lactamase like protein [Rhizobi... 176 3e-42 >ref|ZP_08628875.1| beta-lactamase-like protein [Bradyrhizobiaceae bacterium SG-6C] gb|EGP08234.1| beta-lactamase-like protein [Bradyrhizobiaceae bacterium SG-6C] Length = 251 Score = 350 bits (898), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 164/252 (65%), Positives = 198/252 (78%), Gaps = 2/252 (0%) Query: 1 MKMHMLSGGRLQMSKRTYLPDAARGEMIELPVSCVLLRHTQGNVLFDTGCHPDVATDPEG 60 MKMH+LSGGRL+M + Y PDA R E IELPVSC+L+RH QGNVLFDTGCHP +A +PE Sbjct: 1 MKMHVLSGGRLRMRRSIYFPDAGRDETIELPVSCMLMRHKQGNVLFDTGCHPSIAENPEA 60 Query: 61 RLGTLAKYMRPIMPADDHVLTSLKAVGLGADDIDVVICSHLHTDHCGCNAFFKKATIFVH 120 R G++AKYM PIMP D+VLT L AVGLG DDIDVV+CSHLHTDHCGCN FF+K+TI VH Sbjct: 61 RWGSVAKYMTPIMPPGDNVLTGLTAVGLGPDDIDVVVCSHLHTDHCGCNEFFRKSTIVVH 120 Query: 121 ALEVEAANADNAFDRGYIKADWDHPLKMEIFDKQVDVFGDGKLTLVPLPGHSKGTTGALV 180 A E+ AA A +A GY ADWDHP+ M+ D Q D+FGDG + LVPLPGH+ GT GALV Sbjct: 121 ARELAAARAPDA--AGYFAADWDHPIPMKTIDGQFDLFGDGTIVLVPLPGHTPGTVGALV 178 Query: 181 KLDNSGEFLLASDALSVRANLDQRTSPRNSLDVDQFLKSLDEIARLEASGVKIICGHDEA 240 KLD SGEFLL SDA+S+R NLD+ P+N+ + ++FLKS +EI R+E +G +IC HDEA Sbjct: 179 KLDRSGEFLLTSDAVSIRENLDKNIVPKNTKNAEEFLKSFEEIRRIEKAGATVICSHDEA 238 Query: 241 QWASLQKGPNAY 252 QW SL+KG +AY Sbjct: 239 QWTSLRKGMDAY 250 >ref|YP_002825141.1| putative beta-lactamase-like protein [Sinorhizobium fredii NGR234] gb|ACP24388.1| putative beta-lactamase-like protein [Sinorhizobium fredii NGR234] Length = 253 Score = 272 bits (696), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 129/252 (51%), Positives = 168/252 (66%) Query: 1 MKMHMLSGGRLQMSKRTYLPDAARGEMIELPVSCVLLRHTQGNVLFDTGCHPDVATDPEG 60 MKMH L+GGRL+M + ++P + E IELPV L+RH QGNVLFDTGC+P+ ATDPE Sbjct: 1 MKMHFLAGGRLRMRRSVFVPGVGKEETIELPVHATLIRHRQGNVLFDTGCNPEAATDPEA 60 Query: 61 RLGTLAKYMRPIMPADDHVLTSLKAVGLGADDIDVVICSHLHTDHCGCNAFFKKATIFVH 120 R G LAK M PI + V+ L A+GL A DIDVVICSHLH DHCGCN +F +ATI H Sbjct: 61 RWGGLAKVMTPIFDPEQTVVRQLAALGLEAGDIDVVICSHLHPDHCGCNQYFGRATILCH 120 Query: 121 ALEVEAANADNAFDRGYIKADWDHPLKMEIFDKQVDVFGDGKLTLVPLPGHSKGTTGALV 180 EV AA D A ++GY+K +WD P + F + DVFGDG + L+P+PGH+ G T A V Sbjct: 121 EAEVAAAKTDAAENQGYLKPEWDQPQGFQTFGAEHDVFGDGHIVLLPMPGHTPGMTVAHV 180 Query: 181 KLDNSGEFLLASDALSVRANLDQRTSPRNSLDVDQFLKSLDEIARLEASGVKIICGHDEA 240 L +SG F+LASDA ++AN+D +PRN+ +++ +L + G I+ GHDEA Sbjct: 181 SLRDSGTFVLASDAAPLQANIDAGVAPRNTWNMELAAAALARLKAFRDKGATIVSGHDEA 240 Query: 241 QWASLQKGPNAY 252 QW +L+KG Y Sbjct: 241 QWQALRKGGEFY 252 >ref|NP_660009.1| beta-lactamase like protein [Rhizobium etli CFN 42] ref|YP_001984317.1| probable beta-lactamase like protein [Rhizobium etli CIAT 652] gb|AAM55022.1| probable beta-lactamase like protein [Rhizobium etli CFN 42] gb|ACE93767.1| probable beta-lactamase like protein [Rhizobium etli CIAT 652] gb|EGE58680.1| beta-lactamase like protein [Rhizobium etli CNPAF512] Length = 253 Score = 267 bits (683), Expect = 1e-69, Method: Compositional matrix adjust. Identities = 121/252 (48%), Positives = 168/252 (66%) Query: 1 MKMHMLSGGRLQMSKRTYLPDAARGEMIELPVSCVLLRHTQGNVLFDTGCHPDVATDPEG 60 MKMH L GRL+M + Y+P A + E IELPV L+RH QGN LFD+GC+P+ A DP Sbjct: 1 MKMHFLEAGRLRMRRSIYVPGALKEEAIELPVHATLMRHPQGNALFDSGCNPEAAIDPGA 60 Query: 61 RLGTLAKYMRPIMPADDHVLTSLKAVGLGADDIDVVICSHLHTDHCGCNAFFKKATIFVH 120 R G L+K M PI + V+ LK + L +DIDVVICSHLH DHCGCNA+F++ATI H Sbjct: 61 RWGGLSKVMTPIFSPERTVVHQLKTLALDPEDIDVVICSHLHPDHCGCNAYFRRATILCH 120 Query: 121 ALEVEAANADNAFDRGYIKADWDHPLKMEIFDKQVDVFGDGKLTLVPLPGHSKGTTGALV 180 E +AA A A ++GY++ +WD P + F+ + DVFGDG++ L+P+PGH+ G T A V Sbjct: 121 EAEAQAATASGAENQGYLRGEWDQPQGFQTFNAEHDVFGDGRIVLLPMPGHTPGMTVARV 180 Query: 181 KLDNSGEFLLASDALSVRANLDQRTSPRNSLDVDQFLKSLDEIARLEASGVKIICGHDEA 240 +L+ G F+LASDA ++A++D +PRN+ +++ ++L + L G II GHD+A Sbjct: 181 ELEKDGSFILASDAAPLQASVDTGIAPRNTWNIELAAEALARLKALRERGASIIFGHDDA 240 Query: 241 QWASLQKGPNAY 252 QW L+KG Y Sbjct: 241 QWQELRKGVEFY 252 >gb|AEJ26983.1| Putative beta-lactamase [Paracoccus denitrificans SD1] Length = 253 Score = 254 bits (650), Expect = 7e-66, Method: Compositional matrix adjust. Identities = 130/247 (52%), Positives = 166/247 (67%) Query: 1 MKMHMLSGGRLQMSKRTYLPDAARGEMIELPVSCVLLRHTQGNVLFDTGCHPDVATDPEG 60 M+M +LSGGRL+M K Y+P ++ +M+ELPV VLLRH GNVLFDTGC P A DP G Sbjct: 1 MRMDVLSGGRLKMRKSIYMPAESKEDMVELPVVSVLLRHPSGNVLFDTGCAPQAAEDPSG 60 Query: 61 RLGTLAKYMRPIMPADDHVLTSLKAVGLGADDIDVVICSHLHTDHCGCNAFFKKATIFVH 120 R G LAK M+PI D V+ L GL A+DIDVVICSHLH DHCGCNA F +AT+ H Sbjct: 61 RWGGLAKVMQPIFAPQDAVVNQLPRHGLAAEDIDVVICSHLHPDHCGCNAAFARATVIAH 120 Query: 121 ALEVEAANADNAFDRGYIKADWDHPLKMEIFDKQVDVFGDGKLTLVPLPGHSKGTTGALV 180 A E+ AA A+ A +GY+ +WD P D + D+F DG++ L+PLPGHS G TG + Sbjct: 121 AAELAAARAEGAEKQGYLPQEWDIPQGYSEIDGERDLFDDGRIVLLPLPGHSPGLTGTRI 180 Query: 181 KLDNSGEFLLASDALSVRANLDQRTSPRNSLDVDQFLKSLDEIARLEASGVKIICGHDEA 240 +LD G FLLASDA + ++DQ +P+NS D+D +KSL EI + G +ICGHD+A Sbjct: 181 ELDRDGAFLLASDAAPMMCHVDQGYAPKNSWDMDLAVKSLAEIKAQKDRGATVICGHDDA 240 Query: 241 QWASLQK 247 QW L + Sbjct: 241 QWQELSQ 247 >ref|ZP_03524531.1| probable beta-lactamase like protein [Rhizobium etli GR56] Length = 167 Score = 176 bits (447), Expect = 3e-42, Method: Compositional matrix adjust. Identities = 78/165 (47%), Positives = 113/165 (68%) Query: 88 LGADDIDVVICSHLHTDHCGCNAFFKKATIFVHALEVEAANADNAFDRGYIKADWDHPLK 147 L +DIDVVICSHLH DHCGCNA+F++ATI H E +AA A A ++GY++ +WD P Sbjct: 2 LDPEDIDVVICSHLHPDHCGCNAYFRRATILCHEAEAQAATASGAENQGYLRGEWDQPQG 61 Query: 148 MEIFDKQVDVFGDGKLTLVPLPGHSKGTTGALVKLDNSGEFLLASDALSVRANLDQRTSP 207 + F+ + DVFGDG++ L+P+PGH+ G T A V+L+ G F+LASDA ++A++D +P Sbjct: 62 FQTFNAEHDVFGDGRIVLLPMPGHTPGMTVARVELEKDGSFILASDAAPLQASVDTGIAP 121 Query: 208 RNSLDVDQFLKSLDEIARLEASGVKIICGHDEAQWASLQKGPNAY 252 RN+ +++ ++L + L G II GHD+AQW L+KG Y Sbjct: 122 RNTWNIELAAEALARLKALRERGASIIFGHDDAQWQELRKGVEFY 166