BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0113.0106.p         (147 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_766840.1| transcriptional regulator [Bradyrhizobium japon...   273   4e-72
ref|YP_001243337.1| MarR family transcriptional regulator [Brady...   251   2e-65
ref|YP_004107507.1| regulatory protein MarR [Rhodopseudomonas pa...   251   3e-65
ref|YP_568180.1| regulatory protein MarR [Rhodopseudomonas palus...   249   7e-65
ref|YP_001202774.1| MarR family transcriptional regulator [Brady...   248   2e-64

>ref|NP_766840.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110]
 dbj|BAC45465.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA
           110]
          Length = 147

 Score =  273 bits (699), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 130/147 (88%), Positives = 140/147 (95%)

Query: 1   VAKPPKENSPITEHLAYLLAQANREINRQLETRLAKEGVPVEQWRILKVLSDGNGHSMGE 60
           +AKP KEN+PITEHLAYLLAQANREINRQLE RL+KEGVPVEQWRILKVLSDGNGHSMGE
Sbjct: 1   MAKPSKENTPITEHLAYLLAQANREINRQLELRLSKEGVPVEQWRILKVLSDGNGHSMGE 60

Query: 61  LADAVLLNHPTLTKMIDRMVSDALVYRVQDPKDRRKVLMFVSDRGKALCRRLNSLAVSQE 120
           LADAVLLNHPTLTKMIDRMVSD LVYRVQDP DRRKVLMF+SDRGK LC++LNSLAV QE
Sbjct: 61  LADAVLLNHPTLTKMIDRMVSDTLVYRVQDPNDRRKVLMFISDRGKVLCKKLNSLAVDQE 120

Query: 121 EHIVESYGDKSTTELKRLLESLIGSAN 147
           EHI+ESYG+KST+ELKRLLESLI S+N
Sbjct: 121 EHILESYGNKSTSELKRLLESLIDSSN 147


>ref|YP_001243337.1| MarR family transcriptional regulator [Bradyrhizobium sp. BTAi1]
 gb|ABQ39431.1| transcriptional regulator, MarR family [Bradyrhizobium sp. BTAi1]
          Length = 147

 Score =  251 bits (642), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 120/147 (81%), Positives = 135/147 (91%)

Query: 1   VAKPPKENSPITEHLAYLLAQANREINRQLETRLAKEGVPVEQWRILKVLSDGNGHSMGE 60
           +AK P  N+P+TEHLAYLLAQANREINRQLETRL+ EGVPVEQWRILKVLSDG GHSMG+
Sbjct: 1   MAKSPHPNTPLTEHLAYLLAQANREINRQLETRLSTEGVPVEQWRILKVLSDGEGHSMGD 60

Query: 61  LADAVLLNHPTLTKMIDRMVSDALVYRVQDPKDRRKVLMFVSDRGKALCRRLNSLAVSQE 120
           LA+AVLLNHPTLTKMIDRMVSD+LVYR QD  DRRKVLMF+SDRGKALC+RLNSLA SQE
Sbjct: 61  LAEAVLLNHPTLTKMIDRMVSDSLVYRRQDAHDRRKVLMFISDRGKALCKRLNSLAASQE 120

Query: 121 EHIVESYGDKSTTELKRLLESLIGSAN 147
            HI+E+YGDK+T ELKRLLE+LI +A+
Sbjct: 121 AHILENYGDKATGELKRLLENLIDAAS 147


>ref|YP_004107507.1| regulatory protein MarR [Rhodopseudomonas palustris DX-1]
 gb|ADU42774.1| regulatory protein MarR [Rhodopseudomonas palustris DX-1]
          Length = 147

 Score =  251 bits (640), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 122/147 (82%), Positives = 132/147 (89%)

Query: 1   VAKPPKENSPITEHLAYLLAQANREINRQLETRLAKEGVPVEQWRILKVLSDGNGHSMGE 60
           +AK P  N PITEHLAYLLAQANREINRQLE RL  EGVPVEQWRILKVLSDG GHSMGE
Sbjct: 1   MAKSPTRNPPITEHLAYLLAQANREINRQLEARLRGEGVPVEQWRILKVLSDGKGHSMGE 60

Query: 61  LADAVLLNHPTLTKMIDRMVSDALVYRVQDPKDRRKVLMFVSDRGKALCRRLNSLAVSQE 120
           LA+AVLLNHPTLTKMIDRMVSD+LVYRVQDP+DRRKVLM +SDRGKAL +RLN+LA+SQE
Sbjct: 61  LAEAVLLNHPTLTKMIDRMVSDSLVYRVQDPEDRRKVLMHISDRGKALTQRLNALALSQE 120

Query: 121 EHIVESYGDKSTTELKRLLESLIGSAN 147
            HI E+YGDK+T ELKRLLESLI SA 
Sbjct: 121 AHIAENYGDKATAELKRLLESLIDSAT 147


>ref|YP_568180.1| regulatory protein MarR [Rhodopseudomonas palustris BisB5]
 gb|ABE38279.1| transcriptional regulator, MarR family [Rhodopseudomonas palustris
           BisB5]
          Length = 165

 Score =  249 bits (637), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 121/147 (82%), Positives = 130/147 (88%)

Query: 1   VAKPPKENSPITEHLAYLLAQANREINRQLETRLAKEGVPVEQWRILKVLSDGNGHSMGE 60
           VAK P  N PITEHLAYLLAQANREINRQLE RL  EGVPVEQWRILKVLSDG GHSMG+
Sbjct: 19  VAKSPSRNPPITEHLAYLLAQANREINRQLEARLRDEGVPVEQWRILKVLSDGKGHSMGD 78

Query: 61  LADAVLLNHPTLTKMIDRMVSDALVYRVQDPKDRRKVLMFVSDRGKALCRRLNSLAVSQE 120
           LAD VLLNHPTLTKMIDRMVSD+LVYRVQDP DRRKVLM+ S+RGKAL +RLN+LA+SQE
Sbjct: 79  LADEVLLNHPTLTKMIDRMVSDSLVYRVQDPDDRRKVLMYSSERGKALTQRLNALALSQE 138

Query: 121 EHIVESYGDKSTTELKRLLESLIGSAN 147
            HI ESYGDK+T ELKRLLESLI +A 
Sbjct: 139 AHIAESYGDKATAELKRLLESLIDTAT 165


>ref|YP_001202774.1| MarR family transcriptional regulator [Bradyrhizobium sp. ORS 278]
 emb|CAL74534.1| putative transcriptional regulatory protein, MarR family
           [Bradyrhizobium sp. ORS 278]
          Length = 147

 Score =  248 bits (634), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 118/147 (80%), Positives = 135/147 (91%)

Query: 1   VAKPPKENSPITEHLAYLLAQANREINRQLETRLAKEGVPVEQWRILKVLSDGNGHSMGE 60
           +AK P  N+P+TEHLAYLLAQANREINRQLE+RL+ EGVPVEQWRILKVLSDG GHSMG+
Sbjct: 1   MAKSPNPNTPLTEHLAYLLAQANREINRQLESRLSTEGVPVEQWRILKVLSDGEGHSMGD 60

Query: 61  LADAVLLNHPTLTKMIDRMVSDALVYRVQDPKDRRKVLMFVSDRGKALCRRLNSLAVSQE 120
           LA+AVLLNHPTLTKMIDRMVSD+LVYR QD  DRRKVLMF+S+RGKALC+RLNSLA SQE
Sbjct: 61  LAEAVLLNHPTLTKMIDRMVSDSLVYRRQDAHDRRKVLMFISERGKALCKRLNSLAASQE 120

Query: 121 EHIVESYGDKSTTELKRLLESLIGSAN 147
            HI+E+YGDK+T ELKRLLE+LI +A+
Sbjct: 121 AHILENYGDKATGELKRLLENLIDAAS 147