BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0113.0103.p (506 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001312733.1| EmrB/QacA family drug resistance transporter... 526 e-147 ref|YP_002824332.1| drug resistance transporter EmrB/QacA family... 390 e-106 ref|YP_001313022.1| major facilitator transporter [Sinorhizobium... 380 e-103 ref|YP_001413630.1| EmrB/QacA family drug resistance transporter... 378 e-102 gb|AEG09096.1| drug resistance transporter, EmrB/QacA subfamily ... 377 e-102 >ref|YP_001312733.1| EmrB/QacA family drug resistance transporter [Sinorhizobium medicae WSM419] gb|ABR62800.1| drug resistance transporter, EmrB/QacA subfamily [Sinorhizobium medicae WSM419] Length = 553 Score = 526 bits (1355), Expect = e-147, Method: Compositional matrix adjust. Identities = 294/499 (58%), Positives = 354/499 (70%) Query: 1 LILATATDAINSTVLVIARAQLMGSTHTTTDEIAWVNMAYLAAKLTCFPVAAWLCVRVAS 60 L +A DA+NSTVLV+ R LMG TH T DEIAW+NM YLAAKLT P +AW+ + Sbjct: 31 LSIAATMDAVNSTVLVVTRGHLMGGTHATPDEIAWINMTYLAAKLTALPASAWMMSCASP 90 Query: 61 GKLILAATTVLLVSLVGCAMTHHLEVLIMWRILQGVAGAVLLVCSQFVLFEAFPRRQQGV 120 +L+ A L+ S +GC+ T L LI WR+LQG AGA LLV Q +LF FPR +QG+ Sbjct: 91 SRLLAGAIAALIASSLGCSATDDLGWLIGWRVLQGAAGATLLVVGQTLLFSMFPRSRQGI 150 Query: 121 VQAAFAFSVIMAPTTLTPALQGWAVDTGSWSWIFWASFPLALCGLIAALLLPLAGIPRTE 180 VQ FAF+ IMAPTTLTP+LQGW DT SWSW+F A+ PL GL AA L Sbjct: 151 VQGLFAFATIMAPTTLTPSLQGWIADTHSWSWLFAANVPLGTAGLFAAFLAADGQTTVRL 210 Query: 181 SRPFDWTGVSLMATAMTAIVFVTQEGSRYNWFDEPEIVVLTIVAMIATVSFVVWQFASQR 240 R D G+ L A TA VFVTQEGSRYNWFDEPEI+ + A ++F+ WQF Q Sbjct: 211 VRRLDGVGLVLFALFATAFVFVTQEGSRYNWFDEPEIIEYFALGSAAILAFMAWQFTKQG 270 Query: 241 RGALIDFGAFRDEHFSFGFLVSFVAGCALFGSAFIIPAFATNVLDFSPTYAGFLLLPSGL 300 R L+DF FRDEHF+FGF+VSFVAGCALFGSAF+IPAFAT VLDF P YAGF+LLP G Sbjct: 271 RDPLLDFVIFRDEHFTFGFVVSFVAGCALFGSAFVIPAFATGVLDFPPAYAGFVLLPGGP 330 Query: 301 CVCAGLLAAGSAIQFRSLDPTRPIPIGILCFMTAMWVMSGSTSQSGLPDLVAVLLLRGFG 360 VC GLLAAG I R LDP +PIP+GI+CFM AMW +SGSTS SGL DL+ ++LRG G Sbjct: 331 LVCVGLLAAGGLIDARGLDPAKPIPLGIVCFMAAMWALSGSTSGSGLSDLIPPIMLRGLG 390 Query: 361 LGLLFVSLTLVTLNGLNGVALAHGIALFNVGRQLGGQVGIGWLATYLDHQNVLNRTVLSQ 420 LGLLFVSLTL+TL L +A G+ALFN+GRQ+GGQ GI WL+T LD+QN NRTVLSQ Sbjct: 391 LGLLFVSLTLLTLRDLGPEMIAQGVALFNLGRQMGGQFGIAWLSTILDNQNAQNRTVLSQ 450 Query: 421 FITPGNPAFIQRREAIETALISRGFNPEDAGQAAIRVIQQEFGRQVATVSFNECFLAVAV 480 ++ PG A +R++A+ L SRG+ PE+AG AA VIQ+ F +QVAT+SFN CFLA+A+ Sbjct: 451 YLAPGEHAVTERQDAVANYLTSRGYFPEEAGTAATAVIQKAFAQQVATLSFNACFLAIAL 510 Query: 481 LFLGAAPVLILAKIMLHRL 499 LF+ A PVLI K+ L RL Sbjct: 511 LFIAAVPVLIATKLTLGRL 529 >ref|YP_002824332.1| drug resistance transporter EmrB/QacA family [Sinorhizobium fredii NGR234] gb|ACP23579.1| drug resistance transporter, EmrB/QacA family [Sinorhizobium fredii NGR234] Length = 534 Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust. Identities = 226/503 (44%), Positives = 313/503 (62%), Gaps = 1/503 (0%) Query: 1 LILATATDAINSTVLVIARAQLMGSTHTTTDEIAWVNMAYLAAKLTCFPVAAWLCVRVAS 60 ++LAT T+AI STVL + R ++G T+ T DE AW+++ Y KL F AA L R+ Sbjct: 24 IVLATLTEAIASTVLSLGRGDIIGDTYATPDEFAWLDIGYTTLKLIGFIAAASLVDRIEP 83 Query: 61 GKLILAATTVLLVSLVGCAMTHHLEVLIMWRILQGVAGAVLLVCSQFVLFEAFPRRQQGV 120 +LI+ AT + ++ AMT LE+L+ RI+QG +G VLLV Q +LF A+PR +Q + Sbjct: 84 RRLIIGATLAMGLACGLAAMTARLELLVALRIIQGFSGGVLLVGGQAILFLAYPRSRQPI 143 Query: 121 VQAAFAFSVIMAPTTLTPALQGWAVDTGSWSWIFWASFPLALCGLIAALLLPLAGIPRTE 180 +QA FA ++AP T+ PALQGW +D+ SW+WIF++ PLAL L+ R Sbjct: 144 LQALFAMGSVVAPATIAPALQGWLLDSQSWTWIFFSVVPLALVAAGLLLIADGPMPARMA 203 Query: 181 SRPFDWTGVSLMATAMTAIVFVTQEGSRYNWFDEPEIVVLTIVAMIATVSFVVWQFASQR 240 RPFDW G +L++ + +V +GSR++WF+EP I+ LT++ + A ++F+ Q ++ Sbjct: 204 PRPFDWIGFALISVTLFCATYVLSQGSRWDWFEEPRILWLTVIGLAALLTFLGQQVLARG 263 Query: 241 RGALIDFGAFRDEHFSFGFLVSFVAGCALFGSAFIIPAFATNVLDFSPTYAGFLLLPSGL 300 RG LID F E F F F+VSFVAG ALFGSAF+IPAFA +VL F+PT AG LLLPSG Sbjct: 264 RG-LIDATLFGSEDFCFAFIVSFVAGAALFGSAFLIPAFAVSVLAFTPTDAGQLLLPSGA 322 Query: 301 CVCAGLLAAGSAIQFRSLDPTRPIPIGILCFMTAMWVMSGSTSQSGLPDLVAVLLLRGFG 360 LL A +Q R + P +P GIL M AMW++SGSTS SG D++A +LLRGFG Sbjct: 323 LFVGALLIAAFLVQVRRVAPFATVPFGILMIMAAMWMLSGSTSDSGADDMMAAILLRGFG 382 Query: 361 LGLLFVSLTLVTLNGLNGVALAHGIALFNVGRQLGGQVGIGWLATYLDHQNVLNRTVLSQ 420 LG LF+S+TL+ L A GI LFN GRQLGG +G+ L T +DH V N VL Sbjct: 383 LGFLFLSITLIAFGQLGRGNRAAGIGLFNTGRQLGGLIGVAALQTLIDHGVVANGAVLGA 442 Query: 421 FITPGNPAFIQRREAIETALISRGFNPEDAGQAAIRVIQQEFGRQVATVSFNECFLAVAV 480 ++ G PA I+R A L ++G + A +AA +I + Q ++F+ F AVA+ Sbjct: 443 NLSAGQPAVIERLAATTAMLTAKGMDAAAAARAAAGLIGRAVTGQSTVIAFDTAFNAVAL 502 Query: 481 LFLGAAPVLILAKIMLHRLSPHR 503 LF+ AAP+L+ KI L R + R Sbjct: 503 LFVIAAPLLVAIKIGLARYAKAR 525 >ref|YP_001313022.1| major facilitator transporter [Sinorhizobium medicae WSM419] gb|ABR63089.1| major facilitator superfamily MFS_1 [Sinorhizobium medicae WSM419] Length = 524 Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust. Identities = 217/502 (43%), Positives = 309/502 (61%), Gaps = 1/502 (0%) Query: 1 LILATATDAINSTVLVIARAQLMGSTHTTTDEIAWVNMAYLAAKLTCFPVAAWLCVRVAS 60 ++LAT T+AI STVL + R ++G T+ T DE AW+++ Y KL F A+WL R Sbjct: 23 IVLATLTEAIASTVLSLGRGDIIGDTYATPDEFAWLDVGYTTFKLMGFMAASWLMSRFDP 82 Query: 61 GKLILAATTVLLVSLVGCAMTHHLEVLIMWRILQGVAGAVLLVCSQFVLFEAFPRRQQGV 120 +I+++T + ++ AMT L++L+ R++QG +G +LLV Q V+F AF R +Q + Sbjct: 83 RNVIVSSTLAMGMACGIAAMTARLDLLVALRMIQGFSGGILLVGGQAVIFLAFARSRQPI 142 Query: 121 VQAAFAFSVIMAPTTLTPALQGWAVDTGSWSWIFWASFPLALCGLIAALLLPLAGIPRTE 180 +QA FA ++AP T+ PALQGW +D+ SW+WIF++ PLAL L+ R Sbjct: 143 LQALFAMGSVVAPATIAPALQGWLLDSRSWTWIFFSVVPLALAAAGLLLIADRPMPARNV 202 Query: 181 SRPFDWTGVSLMATAMTAIVFVTQEGSRYNWFDEPEIVVLTIVAMIATVSFVVWQFASQR 240 RPFDW G SL++ A++ +V +GSR++WF+EP I+ L+++ A ++F Q ++ Sbjct: 203 PRPFDWIGFSLISIALSCFTYVFSQGSRWDWFEEPRILWLSVIGTAAILAFFGQQMLAKG 262 Query: 241 RGALIDFGAFRDEHFSFGFLVSFVAGCALFGSAFIIPAFATNVLDFSPTYAGFLLLPSGL 300 +G L DF F E F F F+VSFVAG ALFGSAF+IP+FA +VL F+PT AG LLLPSG Sbjct: 263 QG-LFDFTLFGTEDFCFAFIVSFVAGAALFGSAFLIPSFAVSVLAFTPTDAGQLLLPSGA 321 Query: 301 CVCAGLLAAGSAIQFRSLDPTRPIPIGILCFMTAMWVMSGSTSQSGLPDLVAVLLLRGFG 360 LL A +Q R + P +P GIL M AMW++SGST QSG D++A +LLRG G Sbjct: 322 LFIGALLIAAFLMQARRVPPVATVPFGILMIMGAMWMLSGSTIQSGADDMMAAILLRGAG 381 Query: 361 LGLLFVSLTLVTLNGLNGVALAHGIALFNVGRQLGGQVGIGWLATYLDHQNVLNRTVLSQ 420 LG LF+S+TL+ + L LA GI LFN GRQLGG VG+ L T +DH N VL Sbjct: 382 LGFLFLSITLIAFSDLKSRNLAAGIGLFNTGRQLGGLVGVAALQTLIDHNVAHNLAVLGA 441 Query: 421 FITPGNPAFIQRREAIETALISRGFNPEDAGQAAIRVIQQEFGRQVATVSFNECFLAVAV 480 +T G P+ +R L ++G + A + A ++ + Q ++F+ F AVA+ Sbjct: 442 NVTAGAPSVAERLATSAAMLTAKGMDAAAASRGAASLLGRAAAGQSTVIAFDTAFNAVAL 501 Query: 481 LFLGAAPVLILAKIMLHRLSPH 502 LF+ AAP+L+ KI L RL H Sbjct: 502 LFVIAAPLLVGVKIGLSRLRKH 523 >ref|YP_001413630.1| EmrB/QacA family drug resistance transporter [Parvibaculum lavamentivorans DS-1] gb|ABS63973.1| drug resistance transporter, EmrB/QacA subfamily [Parvibaculum lavamentivorans DS-1] Length = 528 Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust. Identities = 207/501 (41%), Positives = 307/501 (61%), Gaps = 2/501 (0%) Query: 1 LILATATDAINSTVLVIARAQLMGSTHTTTDEIAWVNMAYLAAKLTCFPVAAWLCVRVAS 60 ++LA T+A+ TVL AR ++G + TTDE + +++ Y AAKLT F ++ WL +V + Sbjct: 12 ILLAALTEAVAGTVLATARFDMIGDIYATTDEFSRLDVVYAAAKLTGFVLSPWLLGKVCA 71 Query: 61 GKLILAATTVLLVSLVGCAMTHHLEVLIMWRILQGVAGAVLLVCSQFVLFEAFPRRQQGV 120 + AAT + ++ A+T L++L+ R+LQG AG VLLV Q +LF+ FPR Q V Sbjct: 72 RTCLRAATGAMTLACGAAALTFDLDILVGLRLLQGAAGGVLLVSGQTMLFQTFPRSSQPV 131 Query: 121 VQAAFAFSVIMAPTTLTPALQGWAVDTGSWSWIFWASFPLALCGLIAALLL-PLAGIPRT 179 VQ FA ++AP TL P ++GW VD+ +W+WIF + P+ L L+ +L P AG+ Sbjct: 132 VQCFFAMGAVVAPATLAPYMEGWLVDSLAWTWIFLSIVPIGLAALVLLVLAQPGAGVHAK 191 Query: 180 ESRPFDWTGVSLMATAMTAIVFVTQEGSRYNWFDEPEIVVLTIVAMIATVSFVVWQFASQ 239 RP DW G+ L + A + +V +GSR+ W +E I+ L + ++ F+V+Q + Sbjct: 192 AGRP-DWPGLLLFSIAAYCLTYVLSQGSRWQWLEELSILRLMLGGTVSLTLFMVYQLRAG 250 Query: 240 RRGALIDFGAFRDEHFSFGFLVSFVAGCALFGSAFIIPAFATNVLDFSPTYAGFLLLPSG 299 R AL+D FR F+FGF+ S AG AL GS ++I +F +L + T AG LLLP Sbjct: 251 RTDALLDLSIFRFSGFAFGFVASIAAGIALAGSTYLIQSFVVTILGMTLTAAGRLLLPGA 310 Query: 300 LCVCAGLLAAGSAIQFRSLDPTRPIPIGILCFMTAMWVMSGSTSQSGLPDLVAVLLLRGF 359 L LL +Q + P +P+GI+ M AMW++SGST +SG PDL+ +LLRG Sbjct: 311 LAFIGTLLLTALLVQRHGIKPIATVPLGIIGLMVAMWMLSGSTGESGFPDLMPAVLLRGL 370 Query: 360 GLGLLFVSLTLVTLNGLNGVALAHGIALFNVGRQLGGQVGIGWLATYLDHQNVLNRTVLS 419 LG LF+S+TL+TL L G +A+G+ALFNVGRQ GG G+ +L T +DHQ LNR+VL+ Sbjct: 371 ALGFLFLSITLITLLDLPGRKIAYGVALFNVGRQTGGLFGVAFLETLIDHQTALNRSVLT 430 Query: 420 QFITPGNPAFIQRREAIETALISRGFNPEDAGQAAIRVIQQEFGRQVATVSFNECFLAVA 479 I PG A +R A+ L + G + A +AA++++ +E Q + ++F+ F AVA Sbjct: 431 AHIVPGRVAVTERLAALTDGLAAHGVELDTASRAAVQILARELTMQASVIAFDTAFFAVA 490 Query: 480 VLFLGAAPVLILAKIMLHRLS 500 + F+GAAPVL+ KI+L R+S Sbjct: 491 LFFVGAAPVLVTVKIVLGRIS 511 >gb|AEG09096.1| drug resistance transporter, EmrB/QacA subfamily [Sinorhizobium meliloti BL225C] Length = 550 Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust. Identities = 215/503 (42%), Positives = 306/503 (60%), Gaps = 1/503 (0%) Query: 1 LILATATDAINSTVLVIARAQLMGSTHTTTDEIAWVNMAYLAAKLTCFPVAAWLCVRVAS 60 ++LAT T+AI STVL + R ++G T+ T DE AW+++ Y A KL F A+WL R Sbjct: 23 IVLATLTEAIASTVLSLGRGDIIGDTYATPDEFAWLDVGYTAFKLIGFMAASWLMSRFDP 82 Query: 61 GKLILAATTVLLVSLVGCAMTHHLEVLIMWRILQGVAGAVLLVCSQFVLFEAFPRRQQGV 120 LI+ +T + ++ A+T L++L+ R++QG G LLV Q ++F AFPR +Q + Sbjct: 83 RSLIVGSTLTMGMACGIAAITARLDLLVALRMIQGFCGGTLLVGGQAIIFLAFPRSRQPI 142 Query: 121 VQAAFAFSVIMAPTTLTPALQGWAVDTGSWSWIFWASFPLALCGLIAALLLPLAGIPRTE 180 +QA FA ++AP T+ PALQGW +D+ SW+WIF++ PLAL L+ R Sbjct: 143 LQALFAMGSVVAPATIAPALQGWLLDSQSWTWIFFSIVPLALVAAGLLLIADAPMPARAA 202 Query: 181 SRPFDWTGVSLMATAMTAIVFVTQEGSRYNWFDEPEIVVLTIVAMIATVSFVVWQFASQR 240 RPFDW G SL++ A+ +V +GSR++WF+EP I+ L ++ ++F+ Q ++ Sbjct: 203 RRPFDWIGFSLISIALFCFTYVFSQGSRWDWFEEPRILWLAVIGTATLLAFLGQQVLAKG 262 Query: 241 RGALIDFGAFRDEHFSFGFLVSFVAGCALFGSAFIIPAFATNVLDFSPTYAGFLLLPSGL 300 +G L DF F E F F F+VSFVAG ALFGSAF+IP+FA +VL F+PT AG LLLPSG Sbjct: 263 QG-LFDFTLFETEDFCFAFIVSFVAGAALFGSAFLIPSFAVSVLAFTPTDAGQLLLPSGA 321 Query: 301 CVCAGLLAAGSAIQFRSLDPTRPIPIGILCFMTAMWVMSGSTSQSGLPDLVAVLLLRGFG 360 LL A +Q R + P +P GIL M AMW++SGSTS+SG D++A +LLRG G Sbjct: 322 LFIGALLIAAFLMQLRRVPPVATVPFGILMIMAAMWMLSGSTSESGAGDMMAAILLRGAG 381 Query: 361 LGLLFVSLTLVTLNGLNGVALAHGIALFNVGRQLGGQVGIGWLATYLDHQNVLNRTVLSQ 420 LG LF+S+TL+ + LN LA GI LFN GRQLGG +G+ L T ++H N VL Sbjct: 382 LGFLFLSITLIAFSNLNSRNLASGIGLFNTGRQLGGLIGVSALQTLIEHNVSHNLAVLGA 441 Query: 421 FITPGNPAFIQRREAIETALISRGFNPEDAGQAAIRVIQQEFGRQVATVSFNECFLAVAV 480 +T G PA R L ++G + A + A ++ + Q ++F+ F A+ + Sbjct: 442 NVTAGAPAVADRLTTTAALLTAKGMDAAAASRGAASLLGRAVAGQSTVIAFDTAFNAIGL 501 Query: 481 LFLGAAPVLILAKIMLHRLSPHR 503 LF+ AAPVL+ KI L R + R Sbjct: 502 LFVIAAPVLVGIKIGLSRYAKAR 524