BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0113.0097.p (308 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_766845.1| hypothetical protein blr0205 [Bradyrhizobium ja... 473 e-131 ref|YP_530419.1| PpiC-type peptidyl-prolyl cis-trans isomerase [... 462 e-128 ref|YP_779088.1| PpiC-type peptidyl-prolyl cis-trans isomerase [... 456 e-126 ref|ZP_01044790.1| PpiC-type peptidyl-prolyl cis-trans isomerase... 452 e-125 ref|YP_484151.1| PpiC-type peptidyl-prolyl cis-trans isomerase [... 446 e-123 >ref|NP_766845.1| hypothetical protein blr0205 [Bradyrhizobium japonicum USDA 110] dbj|BAC45470.1| blr0205 [Bradyrhizobium japonicum USDA 110] Length = 323 Score = 473 bits (1217), Expect = e-131, Method: Compositional matrix adjust. Identities = 254/309 (82%), Positives = 277/309 (89%), Gaps = 4/309 (1%) Query: 1 MTTSPPETKTGLRLGLATLAATGCLVAVLAAGLPVRAAESDPVLAKVNGSEIHASDVALA 60 MTTS P TKTGLR GLAT A GCL L AG P RAA+ DPVLAKVNG+EI SDVA+A Sbjct: 17 MTTSFPVTKTGLRFGLAT-ALVGCLALALIAG-PGRAAD-DPVLAKVNGAEIKKSDVAMA 73 Query: 61 EEELGPSLQQMDPSTRKDNVLSFLIDMKIVSKAAEDKKIENNDDFKKRLAFTRNRLLMDS 120 EEELGPSL QMDP+T+ +NVLSFLIDMKIVSKAAEDKK+ ++++FKKRLAF RNRLLMDS Sbjct: 74 EEELGPSLAQMDPATKDENVLSFLIDMKIVSKAAEDKKVADSEEFKKRLAFARNRLLMDS 133 Query: 121 LLASEGKAATTDDAMKKVYEEAAKQITGEQEVRARHILVETEDEAKAIKAELEKGADFGE 180 LLA+EGKAATT DAMKKVYEEA+KQITGEQEVRARHILVETEDEAKA+KAEL+KGADF E Sbjct: 134 LLANEGKAATTPDAMKKVYEEASKQITGEQEVRARHILVETEDEAKAVKAELDKGADFAE 193 Query: 181 LAKKKSKDPGASDGGDLGFFTKEQMVPEFSAVAFSLEPGKISDPVKSQFGWHIIKVEEKR 240 LAKKKSKDPG++DGGDLGFFTKEQMVPEFSAVAF+LEPGKISDPVKSQFGWHIIKVEEKR Sbjct: 194 LAKKKSKDPGSADGGDLGFFTKEQMVPEFSAVAFALEPGKISDPVKSQFGWHIIKVEEKR 253 Query: 241 NRKAPDFEQVKAQIETYVTRKAQADYVAKLREAAKVERMDKPADAAAPADAAKDA-PKPA 299 NRKAPDFEQVKAQIE YVTRKAQADYVAKLR AKVER+D+PA A PADAAK + KP+ Sbjct: 254 NRKAPDFEQVKAQIEQYVTRKAQADYVAKLRTEAKVERLDQPAADAKPADAAKPSDAKPS 313 Query: 300 DNKMAPAKK 308 D+KMAP K Sbjct: 314 DSKMAPPAK 322 >ref|YP_530419.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris BisB18] gb|ABD86100.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris BisB18] Length = 310 Score = 462 bits (1189), Expect = e-128, Method: Compositional matrix adjust. Identities = 230/284 (80%), Positives = 253/284 (89%), Gaps = 3/284 (1%) Query: 1 MTTSPPETKTGLRLGLATLAATGCLVAVLAAGLPVRAAESDPVLAKVNGSEIHASDVALA 60 MT+SP + K LR GLA A TGCL L AGLP RA ++DPVLAKVNG EI SDVA+A Sbjct: 1 MTSSPLDPKPRLRFGLACAALTGCL---LLAGLPARAQDADPVLAKVNGQEIRQSDVAIA 57 Query: 61 EEELGPSLQQMDPSTRKDNVLSFLIDMKIVSKAAEDKKIENNDDFKKRLAFTRNRLLMDS 120 EEELGPSL QMDP+T+ DNVLSFLID+KIV+KAAEDKKI + +DFK +LAF RNRLLMD+ Sbjct: 58 EEELGPSLAQMDPATKTDNVLSFLIDLKIVAKAAEDKKIADREDFKAKLAFARNRLLMDN 117 Query: 121 LLASEGKAATTDDAMKKVYEEAAKQITGEQEVRARHILVETEDEAKAIKAELEKGADFGE 180 LLA EGKAATTD AMKKVY++AAKQITGE EVRARHILVETEDEAKAI+ EL+KGADF E Sbjct: 118 LLAVEGKAATTDAAMKKVYDDAAKQITGETEVRARHILVETEDEAKAIEDELKKGADFAE 177 Query: 181 LAKKKSKDPGASDGGDLGFFTKEQMVPEFSAVAFSLEPGKISDPVKSQFGWHIIKVEEKR 240 LAKKKSKDPGASDGGDLGFFTK+QMVPEFS+VAF+LEPGKISDPVKSQFGWHIIKVEEKR Sbjct: 178 LAKKKSKDPGASDGGDLGFFTKDQMVPEFSSVAFALEPGKISDPVKSQFGWHIIKVEEKR 237 Query: 241 NRKAPDFEQVKAQIETYVTRKAQADYVAKLREAAKVERMDKPAD 284 NRKAPDF QVKAQIETYVTRKAQADYV KLRE AK+ER+DKPA+ Sbjct: 238 NRKAPDFAQVKAQIETYVTRKAQADYVTKLRETAKIERLDKPAE 281 >ref|YP_779088.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris BisA53] gb|ABJ04108.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris BisA53] Length = 309 Score = 456 bits (1174), Expect = e-126, Method: Compositional matrix adjust. Identities = 231/312 (74%), Positives = 262/312 (83%), Gaps = 7/312 (2%) Query: 1 MTTSPPETKTGLRLGLATLAATGCLVAVLAAGLPVRAAESDPVLAKVNGSEIHASDVALA 60 MT S PE+KTGLR GLA A TGCL L A +PVRA +++PV+AKVNG+EI SD+ LA Sbjct: 1 MTASSPESKTGLRFGLACAAVTGCL---LMAAVPVRAQDANPVVAKVNGTEIRQSDLTLA 57 Query: 61 EEELGPSLQQMDPSTRKDNVLSFLIDMKIVSKAAEDKKIENNDDFKKRLAFTRNRLLMDS 120 EEEL P+L QMDP+ RK+NVL+FLIDM+IV+KAAEDKKI + DFK RL F RNR+LMD Sbjct: 58 EEELAPNLAQMDPAARKENVLAFLIDMRIVAKAAEDKKIADRADFKSRLDFARNRILMDQ 117 Query: 121 LLASEGKAATTDDAMKKVYEEAAKQITGEQEVRARHILVETEDEAKAIKAELEKGADFGE 180 LLA+EGKAA T DAMKKVYE+AAKQI GE EV ARHILVETEDEAKA+ EL+KGADF E Sbjct: 118 LLAAEGKAAATGDAMKKVYEDAAKQIAGEPEVHARHILVETEDEAKAVVEELKKGADFAE 177 Query: 181 LAKKKSKDPGASDGGDLGFFTKEQMVPEFSAVAFSLEPGKISDPVKSQFGWHIIKVEEKR 240 LAKKKSKDPGA+DGGDLGFFTK+QMVPEFS AF+LEPGK+S+PVKSQFGWH+IKVEEKR Sbjct: 178 LAKKKSKDPGAADGGDLGFFTKDQMVPEFSTAAFALEPGKVSEPVKSQFGWHVIKVEEKR 237 Query: 241 NRKAPDFEQVKAQIETYVTRKAQADYVAKLREAAKVERMDKPADAAAPADA-AKDAP--- 296 NRKAPDF+QVK QIETYV RKAQADYV KLR AK+ER+DKPA+ A DA A D P Sbjct: 238 NRKAPDFDQVKGQIETYVARKAQADYVTKLRAEAKIERLDKPAEPAKVDDAKAGDKPADA 297 Query: 297 KPADNKMAPAKK 308 KPAD+KMAPAKK Sbjct: 298 KPADSKMAPAKK 309 >ref|ZP_01044790.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrobacter sp. Nb-311A] gb|EAQ37571.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Nitrobacter sp. Nb-311A] Length = 305 Score = 452 bits (1162), Expect = e-125, Method: Compositional matrix adjust. Identities = 231/308 (75%), Positives = 262/308 (85%), Gaps = 3/308 (0%) Query: 1 MTTSPPETKTGLRLGLATLAATGCLVAVLAAGLPVRAAESDPVLAKVNGSEIHASDVALA 60 MT P TK LR+ LA+ A GCL AVL G PV AA++DPVLAKVNG+EIH SDV LA Sbjct: 1 MTILLPATKHSLRVRLASSALGGCLAAVLFVGTPVHAADADPVLAKVNGTEIHQSDVNLA 60 Query: 61 EEELGPSLQQMDPSTRKDNVLSFLIDMKIVSKAAEDKKIENNDDFKKRLAFTRNRLLMDS 120 E+ELGPSL QMDP+ +++N+LSFLIDMKI++KAAE+KKIEN+++FKKRLAF R+RLLMD Sbjct: 61 EQELGPSLAQMDPAAKQENILSFLIDMKIITKAAEEKKIENSEEFKKRLAFARDRLLMDR 120 Query: 121 LLASEGKAATTDDAMKKVYEEAAKQITGEQEVRARHILVETEDEAKAIKAELEKGADFGE 180 LLAS+GKAA TDDAMK VY +A+KQIT EQEV ARHILV TEDEAK I+ EL+KGADF E Sbjct: 121 LLASQGKAAITDDAMKTVYADASKQITSEQEVHARHILVPTEDEAKKIEGELKKGADFAE 180 Query: 181 LAKKKSKDPGASDGGDLGFFTKEQMVPEFSAVAFSLEPGKISDPVKSQFGWHIIKVEEKR 240 LAKK+SKDPGASDGGDLGFFTKEQMVPEFS VAF+LEPGKISDPVK+QFGWHIIKVEEKR Sbjct: 181 LAKKESKDPGASDGGDLGFFTKEQMVPEFSKVAFALEPGKISDPVKTQFGWHIIKVEEKR 240 Query: 241 NRKAPDFEQVKAQIETYVTRKAQADYVAKLREAAKVERMDKPADAAAPADAAKDAPKPAD 300 RKAPDF+QVK QIE +VTRKAQA+YVAKLRE AK+ERM+KPA A A D A A KPAD Sbjct: 241 ARKAPDFDQVKPQIEQFVTRKAQAEYVAKLRETAKIERMNKPA-APAGGDKAGSA-KPAD 298 Query: 301 NKMAPAKK 308 K PAKK Sbjct: 299 GK-TPAKK 305 >ref|YP_484151.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris HaA2] gb|ABD05240.1| PpiC-type peptidyl-prolyl cis-trans isomerase [Rhodopseudomonas palustris HaA2] Length = 306 Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust. Identities = 221/287 (77%), Positives = 248/287 (86%) Query: 1 MTTSPPETKTGLRLGLATLAATGCLVAVLAAGLPVRAAESDPVLAKVNGSEIHASDVALA 60 MT + P ++ LR G+ + AATGCL L A RA +++PVLAKVNG+EI SDV LA Sbjct: 1 MTPASPAARSALRSGIISAAATGCLAFALLASPMARAQDANPVLAKVNGAEIRQSDVTLA 60 Query: 61 EEELGPSLQQMDPSTRKDNVLSFLIDMKIVSKAAEDKKIENNDDFKKRLAFTRNRLLMDS 120 EEELGPSL QMDP+T+K+NVLSFLIDMKIV+KAAEDKKI + +FKKRL F RNRLLMD Sbjct: 61 EEELGPSLAQMDPATKKENVLSFLIDMKIVAKAAEDKKIADRAEFKKRLEFARNRLLMDD 120 Query: 121 LLASEGKAATTDDAMKKVYEEAAKQITGEQEVRARHILVETEDEAKAIKAELEKGADFGE 180 LL EGKAATTD+AMKKVYE+AAKQI+GEQEV ARHILVETEDEAKAI EL+KGADF E Sbjct: 121 LLGVEGKAATTDEAMKKVYEDAAKQISGEQEVHARHILVETEDEAKAIAEELKKGADFAE 180 Query: 181 LAKKKSKDPGASDGGDLGFFTKEQMVPEFSAVAFSLEPGKISDPVKSQFGWHIIKVEEKR 240 LAKKKSKDPGASDGGDLGFFTK+QMVPEFSAVAF+LEPGKISDPVKSQFGWHIIKVEEKR Sbjct: 181 LAKKKSKDPGASDGGDLGFFTKDQMVPEFSAVAFALEPGKISDPVKSQFGWHIIKVEEKR 240 Query: 241 NRKAPDFEQVKAQIETYVTRKAQADYVAKLREAAKVERMDKPADAAA 287 NRK P F+QVK QIE YVTRKAQ+DYV +LR+AAKVER+DKPA+ AA Sbjct: 241 NRKPPTFDQVKPQIEQYVTRKAQSDYVTQLRQAAKVERLDKPAEPAA 287