BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0113.0070.p (325 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001202316.1| S49 family peptidase [Bradyrhizobium sp. ORS... 531 e-149 ref|YP_001236308.1| S49 family peptidase [Bradyrhizobium sp. BTA... 529 e-148 ref|YP_316679.1| peptidase S49, SppA [Nitrobacter winogradskyi N... 514 e-144 ref|YP_530290.1| signal peptide peptidase SppA, 36K type [Rhodop... 511 e-143 ref|ZP_01045128.1| peptidase S49, SppA [Nitrobacter sp. Nb-311A]... 506 e-141 >ref|YP_001202316.1| S49 family peptidase [Bradyrhizobium sp. ORS 278] emb|CAL74066.1| Putative peptidase S49 family; putative signal peptide peptidase SppA [Bradyrhizobium sp. ORS 278] Length = 326 Score = 531 bits (1367), Expect = e-149, Method: Compositional matrix adjust. Identities = 263/326 (80%), Positives = 292/326 (89%), Gaps = 1/326 (0%) Query: 1 MSLDSDVIVDRRRIRRKLTFWRVAAAVIAIAAIVGVGV-VAAGGRGTFSTSNTIARVNID 59 MSLDSDVIVDRRR+RRKLTFWRV A VIAI A+ +G+ ++ GR STS +IARVNI+ Sbjct: 1 MSLDSDVIVDRRRLRRKLTFWRVVAVVIAIGALSAIGLAMSPRGRTALSTSGSIARVNIE 60 Query: 60 GLIRSDQDRVEALERLGKSSYAAVVVHVNSPGGTTAGSEQLYDSLMQLKAKKPLVVVVEG 119 GLIRSDQ+RVEALERL SS AV+VH+NSPGGTTAGSEQLYDSL++LKAKKPLVVVVEG Sbjct: 61 GLIRSDQERVEALERLENSSAEAVIVHINSPGGTTAGSEQLYDSLVRLKAKKPLVVVVEG 120 Query: 120 LAASGGYITAIASDHIVAQQTSLVGSIGVLFQYPNVSELLKTVGVKMEEIKSSPLKAAPN 179 LAASGGYI AIASDHIVAQQ+SLVGSIGVLFQYPNVSELLKTVGVK+EE+KSSPLKAAPN Sbjct: 121 LAASGGYIGAIASDHIVAQQSSLVGSIGVLFQYPNVSELLKTVGVKIEEVKSSPLKAAPN 180 Query: 180 GFEPTSPEARAAIDGLVKDSYAWFRGLVQQRRGMDDALLEKVADGRVFTGRQAVDLKLVD 239 G+EPTSPEARAA+D LVKDSYAWFRGLV+ RR MDDALLEKVADGRVFTGRQAV+LKL+D Sbjct: 181 GYEPTSPEARAALDDLVKDSYAWFRGLVKTRRNMDDALLEKVADGRVFTGRQAVELKLID 240 Query: 240 QLGDEKTAIAWLVAEKKVKSDLPVRNYKLNPRFGDLTFLRTAASVTLDAFGLGAIARRIE 299 +LGDEKTA+AWLVA K VK DLPVR+YKL PRFGDLTFLRTA S+ LDA GL IAR+IE Sbjct: 241 ELGDEKTAVAWLVANKNVKKDLPVRDYKLVPRFGDLTFLRTATSIALDAVGLSGIARQIE 300 Query: 300 QGGVAEAVDRFGLDGMLALWSPAGTN 325 + GV +AVDR GLDGMLALW+PA N Sbjct: 301 RTGVVQAVDRVGLDGMLALWTPAAGN 326 >ref|YP_001236308.1| S49 family peptidase [Bradyrhizobium sp. BTAi1] gb|ABQ32402.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Bradyrhizobium sp. BTAi1] Length = 326 Score = 529 bits (1362), Expect = e-148, Method: Compositional matrix adjust. Identities = 259/326 (79%), Positives = 292/326 (89%), Gaps = 1/326 (0%) Query: 1 MSLDSDVIVDRRRIRRKLTFWRVAAAVIAIAAIVGVGV-VAAGGRGTFSTSNTIARVNID 59 MSLDSDVIVDRRR+RRKLTFWRV A +IAIAA+ +G+ ++ GR STS +IARVNI+ Sbjct: 1 MSLDSDVIVDRRRLRRKLTFWRVVAVLIAIAALSAIGLAMSPRGRTALSTSGSIARVNIE 60 Query: 60 GLIRSDQDRVEALERLGKSSYAAVVVHVNSPGGTTAGSEQLYDSLMQLKAKKPLVVVVEG 119 GLIRSD +RVEALERL SS AV+VH+NSPGGTTAGSEQLYDSL++LKAKKPLVVVVEG Sbjct: 61 GLIRSDHERVEALERLENSSAEAVIVHINSPGGTTAGSEQLYDSLVRLKAKKPLVVVVEG 120 Query: 120 LAASGGYITAIASDHIVAQQTSLVGSIGVLFQYPNVSELLKTVGVKMEEIKSSPLKAAPN 179 LAASGGYI AIA+DHIVAQQ+SLVGSIGVLFQYPNVSELLKT+GVK+EE+KSSPLKAAPN Sbjct: 121 LAASGGYIGAIAADHIVAQQSSLVGSIGVLFQYPNVSELLKTIGVKVEEVKSSPLKAAPN 180 Query: 180 GFEPTSPEARAAIDGLVKDSYAWFRGLVQQRRGMDDALLEKVADGRVFTGRQAVDLKLVD 239 G+EPTSPEARAA+D LVKDSYAWFRGLV+ RRGMDDALLEKVADGRVFTGRQA++LKL+D Sbjct: 181 GYEPTSPEARAALDALVKDSYAWFRGLVKDRRGMDDALLEKVADGRVFTGRQAIELKLID 240 Query: 240 QLGDEKTAIAWLVAEKKVKSDLPVRNYKLNPRFGDLTFLRTAASVTLDAFGLGAIARRIE 299 +LGDEKTA+AWLVA K VK DLPVR+YKL PRFGDLTFLRTA S+ L+A GL IA +IE Sbjct: 241 ELGDEKTAVAWLVANKNVKKDLPVRDYKLVPRFGDLTFLRTATSLVLNAVGLSGIAHQIE 300 Query: 300 QGGVAEAVDRFGLDGMLALWSPAGTN 325 Q GV +AVDR GLDGMLALW+PA N Sbjct: 301 QAGVVQAVDRLGLDGMLALWTPAAGN 326 >ref|YP_316679.1| peptidase S49, SppA [Nitrobacter winogradskyi Nb-255] gb|ABA03327.1| signal peptide peptidase A, Serine peptidase, MEROPS family S49 [Nitrobacter winogradskyi Nb-255] Length = 327 Score = 514 bits (1325), Expect = e-144, Method: Compositional matrix adjust. Identities = 249/325 (76%), Positives = 285/325 (87%) Query: 1 MSLDSDVIVDRRRIRRKLTFWRVAAAVIAIAAIVGVGVVAAGGRGTFSTSNTIARVNIDG 60 MS++SD+IVDRRR+RRKLTFWRVA+A+I I A+V +G A+ G + S+ I RVNIDG Sbjct: 3 MSMESDMIVDRRRLRRKLTFWRVASALIVIGAVVALGAYASPLGGRLTGSSAIQRVNIDG 62 Query: 61 LIRSDQDRVEALERLGKSSYAAVVVHVNSPGGTTAGSEQLYDSLMQLKAKKPLVVVVEGL 120 LIRSDQ RVEALERLGKS AV+VH+NSPGGTTAGSE+LY++L +LKAKKP+VVVVEGL Sbjct: 63 LIRSDQKRVEALERLGKSKAPAVIVHINSPGGTTAGSEELYEALTRLKAKKPMVVVVEGL 122 Query: 121 AASGGYITAIASDHIVAQQTSLVGSIGVLFQYPNVSELLKTVGVKMEEIKSSPLKAAPNG 180 ASGGYI A+ASDHIVAQQT+LVGSIGVLFQYPNV+ELLKTVGVK+E +KSSPLKAAP+G Sbjct: 123 GASGGYIAALASDHIVAQQTALVGSIGVLFQYPNVTELLKTVGVKVEAVKSSPLKAAPSG 182 Query: 181 FEPTSPEARAAIDGLVKDSYAWFRGLVQQRRGMDDALLEKVADGRVFTGRQAVDLKLVDQ 240 +EPTSPEARAAID LVKDS+AWFRGLVQ RRGMDDA LEKVADGRVFTGRQA+DLKL+DQ Sbjct: 183 YEPTSPEARAAIDALVKDSFAWFRGLVQNRRGMDDAQLEKVADGRVFTGRQALDLKLIDQ 242 Query: 241 LGDEKTAIAWLVAEKKVKSDLPVRNYKLNPRFGDLTFLRTAASVTLDAFGLGAIARRIEQ 300 LGDEK AIAWLVAEKKV DLPVR++KL PRF DLTF+RTAASV DA GLG+IAR++EQ Sbjct: 243 LGDEKVAIAWLVAEKKVAPDLPVRDFKLTPRFTDLTFIRTAASVAFDALGLGSIARQVEQ 302 Query: 301 GGVAEAVDRFGLDGMLALWSPAGTN 325 G+ A DR LDGMLALW PA +N Sbjct: 303 AGIVRAADRLNLDGMLALWHPAPSN 327 >ref|YP_530290.1| signal peptide peptidase SppA, 36K type [Rhodopseudomonas palustris BisB18] gb|ABD85971.1| signal peptide peptidase SppA, 36K type [Rhodopseudomonas palustris BisB18] Length = 325 Score = 511 bits (1316), Expect = e-143, Method: Compositional matrix adjust. Identities = 260/325 (80%), Positives = 292/325 (89%) Query: 1 MSLDSDVIVDRRRIRRKLTFWRVAAAVIAIAAIVGVGVVAAGGRGTFSTSNTIARVNIDG 60 MS DSDVIVDRRR+RRKLTFWRVAAA++AIAA++ VG TS IARV IDG Sbjct: 1 MSFDSDVIVDRRRMRRKLTFWRVAAALVAIAAVIAVGSATVPSGPLAGTSGAIARVKIDG 60 Query: 61 LIRSDQDRVEALERLGKSSYAAVVVHVNSPGGTTAGSEQLYDSLMQLKAKKPLVVVVEGL 120 LIRSD DRVEALERL KS+ AAVVVH+NSPGGTTAGSEQLYD+L++LKAKKPLVVV+EGL Sbjct: 61 LIRSDADRVEALERLEKSAAAAVVVHINSPGGTTAGSEQLYDALVRLKAKKPLVVVIEGL 120 Query: 121 AASGGYITAIASDHIVAQQTSLVGSIGVLFQYPNVSELLKTVGVKMEEIKSSPLKAAPNG 180 AASGGYI AIASDHIVAQQ+SLVGSIGVLFQ+PN +EL+KTVGVK+EE+KSSPLKAAPNG Sbjct: 121 AASGGYIAAIASDHIVAQQSSLVGSIGVLFQFPNFTELMKTVGVKVEEVKSSPLKAAPNG 180 Query: 181 FEPTSPEARAAIDGLVKDSYAWFRGLVQQRRGMDDALLEKVADGRVFTGRQAVDLKLVDQ 240 FEPTSPEARAA++ LVKDSYAWFRGLV+ RRGMDD LLEKVADGRVFTGRQAVDLKL+DQ Sbjct: 181 FEPTSPEARAALESLVKDSYAWFRGLVKSRRGMDDQLLEKVADGRVFTGRQAVDLKLIDQ 240 Query: 241 LGDEKTAIAWLVAEKKVKSDLPVRNYKLNPRFGDLTFLRTAASVTLDAFGLGAIARRIEQ 300 LGDEKTAIAWLVAEKKVK+DLPVR+YKL PRFGDLTFLR A S+TLDA GL A+AR+IE+ Sbjct: 241 LGDEKTAIAWLVAEKKVKADLPVRDYKLTPRFGDLTFLRAATSITLDALGLNAVARQIER 300 Query: 301 GGVAEAVDRFGLDGMLALWSPAGTN 325 GV ++V++ GLDGMLALW PAG+N Sbjct: 301 AGVVQSVEQLGLDGMLALWRPAGSN 325 >ref|ZP_01045128.1| peptidase S49, SppA [Nitrobacter sp. Nb-311A] gb|EAQ37133.1| peptidase S49, SppA [Nitrobacter sp. Nb-311A] Length = 327 Score = 506 bits (1302), Expect = e-141, Method: Compositional matrix adjust. Identities = 247/325 (76%), Positives = 283/325 (87%) Query: 1 MSLDSDVIVDRRRIRRKLTFWRVAAAVIAIAAIVGVGVVAAGGRGTFSTSNTIARVNIDG 60 MS++SDVIVDRRR+RRKLTFWRVA+A+I I A++ VG A G + ++ I RV+I+G Sbjct: 3 MSMESDVIVDRRRLRRKLTFWRVASALIVIGAVIAVGAYATPWGGKLTGASAIQRVSING 62 Query: 61 LIRSDQDRVEALERLGKSSYAAVVVHVNSPGGTTAGSEQLYDSLMQLKAKKPLVVVVEGL 120 LIRSDQ RVEALERLGKSS AV+VH+NSPGGTTAGSE+LYD+L +LKAKKP+VVVVEGL Sbjct: 63 LIRSDQKRVEALERLGKSSAPAVIVHINSPGGTTAGSEELYDALTRLKAKKPMVVVVEGL 122 Query: 121 AASGGYITAIASDHIVAQQTSLVGSIGVLFQYPNVSELLKTVGVKMEEIKSSPLKAAPNG 180 ASGGYI A+ASDHIVAQQT+LVGSIGVLFQYPN +ELLKTVGV+ME +KSSPLKAAPNG Sbjct: 123 GASGGYIAALASDHIVAQQTALVGSIGVLFQYPNFTELLKTVGVQMEAMKSSPLKAAPNG 182 Query: 181 FEPTSPEARAAIDGLVKDSYAWFRGLVQQRRGMDDALLEKVADGRVFTGRQAVDLKLVDQ 240 +EPTSPEARAAID LVKDS+ WFRGLV+ RRGMDDA LEKVADGRVFTGRQAV+LKL+DQ Sbjct: 183 YEPTSPEARAAIDALVKDSFDWFRGLVRDRRGMDDAQLEKVADGRVFTGRQAVNLKLIDQ 242 Query: 241 LGDEKTAIAWLVAEKKVKSDLPVRNYKLNPRFGDLTFLRTAASVTLDAFGLGAIARRIEQ 300 LGDEK AIAWLVAEKKV DLPVR++KL+PRF DLTFLRTAASV DA GL +IAR++EQ Sbjct: 243 LGDEKVAIAWLVAEKKVAPDLPVRDFKLSPRFTDLTFLRTAASVAFDALGLNSIARQVEQ 302 Query: 301 GGVAEAVDRFGLDGMLALWSPAGTN 325 G A DR GL+GMLALW PA +N Sbjct: 303 TGFVGAADRLGLNGMLALWQPAPSN 327