BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0113.0069.p (258 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773755.1| phosphoribosylaminoimidazole carboxylase ATPase... 377 e-103 ref|YP_317615.1| phosphoribosylaminoimidazole carboxylase ATPase... 357 1e-96 ref|YP_001242642.1| phosphoribosylaminoimidazole carboxylase ATP... 351 6e-95 ref|YP_485067.1| phosphoribosylaminoimidazole carboxylase ATPase... 350 1e-94 ref|YP_568561.1| phosphoribosylaminoimidazole carboxylase ATPase... 350 1e-94 >ref|NP_773755.1| phosphoribosylaminoimidazole carboxylase ATPase subunit [Bradyrhizobium japonicum USDA 110] dbj|BAC52380.1| phosphoribosylaminoimidazole carboxylase ATPase subunit [Bradyrhizobium japonicum USDA 110] Length = 368 Score = 377 bits (969), Expect = e-103, Method: Compositional matrix adjust. Identities = 197/231 (85%), Positives = 210/231 (90%) Query: 1 VTASNGVKLKPGDTIGILGGGQLGRMLAMAAARLGLRCQVFSPDPDSPAFDVVQNATCAE 60 +T + VKLKPGDTIGILGGGQLGRMLAMAAARLGLRCQVFSPDPDSPAFDVV NATCAE Sbjct: 1 MTDAKQVKLKPGDTIGILGGGQLGRMLAMAAARLGLRCQVFSPDPDSPAFDVVLNATCAE 60 Query: 61 YADVEALELFANDVDVVTYEFENVPAATAMVLAARRPVLPAYKILETTQDRLIEKDFVSK 120 YADVEALELFANDVDV+TYEFENVPAA AMVL ARRPVLP KILETTQDRL EKDFV++ Sbjct: 61 YADVEALELFANDVDVITYEFENVPAAAAMVLDARRPVLPNRKILETTQDRLAEKDFVTR 120 Query: 121 LGIGTADYVDVSSVGTLRTAIERIGLPAVIKTRRFGYDGKGQAIIRAGDDLEQVWQDLGT 180 LGIGTA Y DV+SV +LR AI RIGLPAV+KTRRFGYDGKGQAIIRAGDD+ +VW L T Sbjct: 121 LGIGTAAYADVTSVPSLREAILRIGLPAVLKTRRFGYDGKGQAIIRAGDDIAKVWTSLAT 180 Query: 181 KSAILEAFVPFEREISVIAARSASGEVECFDVTENEHRDHILKTSRAPAAI 231 KSAILEAFVP+EREISVIAARS +G+VECFDVTENEHRDHILK SRAPA I Sbjct: 181 KSAILEAFVPYEREISVIAARSVAGQVECFDVTENEHRDHILKISRAPAPI 231 >ref|YP_317615.1| phosphoribosylaminoimidazole carboxylase ATPase subunit [Nitrobacter winogradskyi Nb-255] gb|ABA04263.1| 5-(carboxyamino)imidazole ribonucleotide synthase [Nitrobacter winogradskyi Nb-255] Length = 370 Score = 357 bits (916), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 189/231 (81%), Positives = 205/231 (88%) Query: 1 VTASNGVKLKPGDTIGILGGGQLGRMLAMAAARLGLRCQVFSPDPDSPAFDVVQNATCAE 60 +T S LKPG TIGILGGGQLGRML +AAA LGL+CQVFSPDPDSPAFDVVQNATCAE Sbjct: 1 MTGSRRPTLKPGGTIGILGGGQLGRMLVLAAAHLGLKCQVFSPDPDSPAFDVVQNATCAE 60 Query: 61 YADVEALELFANDVDVVTYEFENVPAATAMVLAARRPVLPAYKILETTQDRLIEKDFVSK 120 YADVEALELFA DVDV+TYEFENVPAATAMVLAARRPVLP ++ILET QDRL+EK+FV+ Sbjct: 61 YADVEALELFATDVDVITYEFENVPAATAMVLAARRPVLPDHRILETVQDRLLEKNFVTG 120 Query: 121 LGIGTADYVDVSSVGTLRTAIERIGLPAVIKTRRFGYDGKGQAIIRAGDDLEQVWQDLGT 180 LGIGTA Y DV+S LR AI+ IGLPAVIKTRRFGYDGKGQAIIRAGD+++QVW DL T Sbjct: 121 LGIGTAAYADVASAQALREAIKVIGLPAVIKTRRFGYDGKGQAIIRAGDNVDQVWDDLCT 180 Query: 181 KSAILEAFVPFEREISVIAARSASGEVECFDVTENEHRDHILKTSRAPAAI 231 KSA++EAFVPFEREISVIAAR A G VECFDVTENEH DHILK SRAPAAI Sbjct: 181 KSAVVEAFVPFEREISVIAARGADGRVECFDVTENEHHDHILKYSRAPAAI 231 >ref|YP_001242642.1| phosphoribosylaminoimidazole carboxylase ATPase subunit [Bradyrhizobium sp. BTAi1] gb|ABQ38736.1| 5-(carboxyamino)imidazole ribonucleotide synthase [Bradyrhizobium sp. BTAi1] Length = 371 Score = 351 bits (901), Expect = 6e-95, Method: Compositional matrix adjust. Identities = 195/231 (84%), Positives = 208/231 (90%) Query: 1 VTASNGVKLKPGDTIGILGGGQLGRMLAMAAARLGLRCQVFSPDPDSPAFDVVQNATCAE 60 ++ SN VKLKPGDTIGILGGGQLGRMLA+AAARLGLRCQVFSPDPDSPAFDVV NATCAE Sbjct: 1 MSGSNRVKLKPGDTIGILGGGQLGRMLALAAARLGLRCQVFSPDPDSPAFDVVLNATCAE 60 Query: 61 YADVEALELFANDVDVVTYEFENVPAATAMVLAARRPVLPAYKILETTQDRLIEKDFVSK 120 YADVEALELFANDVDVVTYEFENVP+A AMVLAARRPVLP+ LETTQDRL EKDFV+ Sbjct: 61 YADVEALELFANDVDVVTYEFENVPSAAAMVLAARRPVLPSRSALETTQDRLTEKDFVTS 120 Query: 121 LGIGTADYVDVSSVGTLRTAIERIGLPAVIKTRRFGYDGKGQAIIRAGDDLEQVWQDLGT 180 LGI TA+Y DVSS TLR AI RIGLPAV+KTRRFGYDGKGQ IR GDDLE++W +LGT Sbjct: 121 LGIRTANYADVSSPSTLREAILRIGLPAVLKTRRFGYDGKGQVKIRQGDDLEKLWAELGT 180 Query: 181 KSAILEAFVPFEREISVIAARSASGEVECFDVTENEHRDHILKTSRAPAAI 231 KSAILEAFVPFEREISVIAAR A G+VECFDVTENEHRDHILK S+APA I Sbjct: 181 KSAILEAFVPFEREISVIAARGADGQVECFDVTENEHRDHILKVSQAPARI 231 >ref|YP_485067.1| phosphoribosylaminoimidazole carboxylase ATPase subunit [Rhodopseudomonas palustris HaA2] gb|ABD06156.1| phosphoribosylaminoimidazole carboxylase [Rhodopseudomonas palustris HaA2] Length = 364 Score = 350 bits (899), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 179/223 (80%), Positives = 197/223 (88%) Query: 9 LKPGDTIGILGGGQLGRMLAMAAARLGLRCQVFSPDPDSPAFDVVQNATCAEYADVEALE 68 LKPGDTIGILGGGQLGRMLAMAAARLGLRC VFSPDPDSPAFDVVQNA CAEYADVEALE Sbjct: 9 LKPGDTIGILGGGQLGRMLAMAAARLGLRCNVFSPDPDSPAFDVVQNAVCAEYADVEALE 68 Query: 69 LFANDVDVVTYEFENVPAATAMVLAARRPVLPAYKILETTQDRLIEKDFVSKLGIGTADY 128 +FA DVDV+TYEFENVPA+ A+VLAAR+PVLP YKILETTQDRL EKDFV+ LGIGTA Y Sbjct: 69 MFAADVDVITYEFENVPASAALVLAARKPVLPDYKILETTQDRLAEKDFVTGLGIGTAAY 128 Query: 129 VDVSSVGTLRTAIERIGLPAVIKTRRFGYDGKGQAIIRAGDDLEQVWQDLGTKSAILEAF 188 DV+S TLR AI ++GLPAV+KTRRFGYDGKGQ IIR GDD + W+ L T++AILEAF Sbjct: 129 ADVTSAQTLRAAIAKLGLPAVLKTRRFGYDGKGQVIIREGDDPDAAWEKLETRAAILEAF 188 Query: 189 VPFEREISVIAARSASGEVECFDVTENEHRDHILKTSRAPAAI 231 VPFERE+SVIAAR A G+V C+DVTENEHRDHILK SR PA + Sbjct: 189 VPFEREVSVIAARGADGQVVCYDVTENEHRDHILKVSRVPAPV 231 >ref|YP_568561.1| phosphoribosylaminoimidazole carboxylase ATPase subunit [Rhodopseudomonas palustris BisB5] gb|ABE38660.1| phosphoribosylaminoimidazole carboxylase [Rhodopseudomonas palustris BisB5] Length = 364 Score = 350 bits (897), Expect = 1e-94, Method: Compositional matrix adjust. Identities = 181/234 (77%), Positives = 203/234 (86%) Query: 1 VTASNGVKLKPGDTIGILGGGQLGRMLAMAAARLGLRCQVFSPDPDSPAFDVVQNATCAE 60 +TA + LKPGDTIGILGGGQLGRMLAMAAARLGLRC VFSPDPDSPAFDVVQNATCAE Sbjct: 1 MTAPVQLVLKPGDTIGILGGGQLGRMLAMAAARLGLRCHVFSPDPDSPAFDVVQNATCAE 60 Query: 61 YADVEALELFANDVDVVTYEFENVPAATAMVLAARRPVLPAYKILETTQDRLIEKDFVSK 120 YADVEALE+FA+DVDV+TYEFENVPA+ A+VLAAR+PVLP Y+ILETTQDRL EKDFV+K Sbjct: 61 YADVEALEMFASDVDVITYEFENVPASAALVLAARKPVLPDYRILETTQDRLGEKDFVTK 120 Query: 121 LGIGTADYVDVSSVGTLRTAIERIGLPAVIKTRRFGYDGKGQAIIRAGDDLEQVWQDLGT 180 LGIGTA Y DV+S LR AI R+GLPAV+KTRRFGYDGKGQ I+R GDD + W L T Sbjct: 121 LGIGTAAYADVTSPQMLRAAIARLGLPAVLKTRRFGYDGKGQIILREGDDPDAAWAKLET 180 Query: 181 KSAILEAFVPFEREISVIAARSASGEVECFDVTENEHRDHILKTSRAPAAIXAA 234 ++AILEAFVPFERE+SVIAAR + G+V C+DVTENEHRDHILK SR PA + A Sbjct: 181 RAAILEAFVPFEREVSVIAARGSDGQVVCYDVTENEHRDHILKVSRVPAPVTDA 234