BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0113.0066.p         (83 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_773752.1| hypothetical protein bsr7112 [Bradyrhizobium ja...   126   1e-27
ref|ZP_08629786.1| hypothetical protein CSIRO_2880 [Bradyrhizobi...   122   2e-26
ref|YP_001203352.1| hypothetical protein BRADO1208 [Bradyrhizobi...   115   2e-24
ref|YP_783029.1| hypothetical protein RPE_4123 [Rhodopseudomonas...   108   2e-22
ref|YP_001242639.1| hypothetical protein BBta_6846 [Bradyrhizobi...   108   4e-22

>ref|NP_773752.1| hypothetical protein bsr7112 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC52377.1| bsr7112 [Bradyrhizobium japonicum USDA 110]
          Length = 83

 Score =  126 bits (316), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 59/83 (71%), Positives = 68/83 (81%)

Query: 1  MADVTYYVALPFMQDDDGTPVAGNAEECQSSAVALRRVETMSRMPGSIGAVAFSRTGDPA 60
          M+DVTYYVA+PF+ DDDG+PVAG AEECQSS  ALRR E ++R  G IGAVAF R+GDP 
Sbjct: 1  MSDVTYYVAMPFLIDDDGSPVAGAAEECQSSTAALRRAEILARGAGHIGAVAFCRSGDPM 60

Query: 61 IGEFGDAKLLRAYGNVPEDLSAL 83
           GEFGDA LLR +GNVPEDL+ L
Sbjct: 61 TGEFGDATLLRKFGNVPEDLATL 83


>ref|ZP_08629786.1| hypothetical protein CSIRO_2880 [Bradyrhizobiaceae bacterium
          SG-6C]
 gb|EGP07641.1| hypothetical protein CSIRO_2880 [Bradyrhizobiaceae bacterium
          SG-6C]
          Length = 83

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 56/83 (67%), Positives = 71/83 (85%)

Query: 1  MADVTYYVALPFMQDDDGTPVAGNAEECQSSAVALRRVETMSRMPGSIGAVAFSRTGDPA 60
          MAD++YYVALPF QDDDG+ VAG AEE QS++ A+RR ET+SR PG+IGAVAF+R+GDP 
Sbjct: 1  MADISYYVALPFAQDDDGSVVAGTAEEFQSASTAIRRAETLSRTPGAIGAVAFTRSGDPM 60

Query: 61 IGEFGDAKLLRAYGNVPEDLSAL 83
           G+F DA +L+++GNVP DLSAL
Sbjct: 61 TGDFRDAVVLKSFGNVPADLSAL 83


>ref|YP_001203352.1| hypothetical protein BRADO1208 [Bradyrhizobium sp. ORS 278]
 emb|CAL75115.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 83

 Score =  115 bits (289), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 54/83 (65%), Positives = 67/83 (80%)

Query: 1  MADVTYYVALPFMQDDDGTPVAGNAEECQSSAVALRRVETMSRMPGSIGAVAFSRTGDPA 60
          M DVTYYVA+PF +D+ GT VAG AEECQSS+ ALRR E MSR+P +IGA+AFSR+GDP 
Sbjct: 1  MPDVTYYVAMPFRRDELGTLVAGAAEECQSSSAALRRAEAMSRLPDNIGAIAFSRSGDPM 60

Query: 61 IGEFGDAKLLRAYGNVPEDLSAL 83
          IGEF DA+LL  +G +P++L  L
Sbjct: 61 IGEFSDAQLLHKFGELPDNLGEL 83


>ref|YP_783029.1| hypothetical protein RPE_4123 [Rhodopseudomonas palustris BisA53]
 gb|ABJ08049.1| conserved hypothetical protein [Rhodopseudomonas palustris
          BisA53]
          Length = 82

 Score =  108 bits (270), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 55/83 (66%), Positives = 62/83 (74%), Gaps = 1/83 (1%)

Query: 1  MADVTYYVALPFMQDDDGTPVAGNAEECQSSAVALRRVETMSRMPGSIGAVAFSRTGDPA 60
          MADVTYYVALPF +DDDG P A    ECQS+  A+ R E ++R  G IGAVAFSR+GDP 
Sbjct: 1  MADVTYYVALPFGRDDDG-PAAREGTECQSAHAAIMRAEALARAEGHIGAVAFSRSGDPM 59

Query: 61 IGEFGDAKLLRAYGNVPEDLSAL 83
          IGEF DA LLRA+G VP DLS L
Sbjct: 60 IGEFSDAVLLRAFGEVPSDLSGL 82


>ref|YP_001242639.1| hypothetical protein BBta_6846 [Bradyrhizobium sp. BTAi1]
 gb|ABQ38733.1| hypothetical protein BBta_6846 [Bradyrhizobium sp. BTAi1]
          Length = 83

 Score =  108 bits (269), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 51/83 (61%), Positives = 63/83 (75%)

Query: 1  MADVTYYVALPFMQDDDGTPVAGNAEECQSSAVALRRVETMSRMPGSIGAVAFSRTGDPA 60
          M DVTYYVALPF  D+ G  +AG AEEC+S+  ALRR E MSR+  +IGAVAFSR+GDP 
Sbjct: 1  MPDVTYYVALPFRLDESGALIAGAAEECRSATAALRRAEAMSRLGDNIGAVAFSRSGDPL 60

Query: 61 IGEFGDAKLLRAYGNVPEDLSAL 83
          +GEF DA+LL  +G +P+DL  L
Sbjct: 61 LGEFSDAQLLHKFGELPDDLGEL 83