BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0113.0064.p         (68 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_01047077.1| hypothetical protein NB311A_10995 [Nitrobacte...   119   2e-25
ref|YP_576526.1| hypothetical protein Nham_1238 [Nitrobacter ham...   119   2e-25
ref|YP_317617.1| hypothetical protein Nwi_1003 [Nitrobacter wino...   117   5e-25
ref|YP_533803.1| hypothetical protein RPC_3958 [Rhodopseudomonas...   117   8e-25
ref|YP_782993.1| hypothetical protein RPE_4087 [Rhodopseudomonas...   113   1e-23

>ref|ZP_01047077.1| hypothetical protein NB311A_10995 [Nitrobacter sp. Nb-311A]
 gb|EAQ34982.1| hypothetical protein NB311A_10995 [Nitrobacter sp. Nb-311A]
          Length = 68

 Score =  119 bits (298), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 62/68 (91%), Positives = 65/68 (95%)

Query: 1  MNDQDERELIAELARLQQEHRDLDAAIDALHQSPAPDLLMLQRLKKRKLQLRDRIAFIED 60
          M D++EREL AELARLQQEHRDLDAAIDALHQSPAPDLL LQRLKKRKLQLRDRI+FIED
Sbjct: 1  MTDEEERELGAELARLQQEHRDLDAAIDALHQSPAPDLLRLQRLKKRKLQLRDRISFIED 60

Query: 61 QITPDIIA 68
          QITPDIIA
Sbjct: 61 QITPDIIA 68


>ref|YP_576526.1| hypothetical protein Nham_1238 [Nitrobacter hamburgensis X14]
 gb|ABE62066.1| protein of unknown function DUF465 [Nitrobacter hamburgensis X14]
          Length = 91

 Score =  119 bits (297), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 62/68 (91%), Positives = 65/68 (95%)

Query: 1  MNDQDERELIAELARLQQEHRDLDAAIDALHQSPAPDLLMLQRLKKRKLQLRDRIAFIED 60
          M D+++REL AELARLQQEHRDLDAAIDALHQSPAPDLL LQRLKKRKLQLRDRIAFIED
Sbjct: 24 MADEEQRELGAELARLQQEHRDLDAAIDALHQSPAPDLLRLQRLKKRKLQLRDRIAFIED 83

Query: 61 QITPDIIA 68
          QITPDIIA
Sbjct: 84 QITPDIIA 91


>ref|YP_317617.1| hypothetical protein Nwi_1003 [Nitrobacter winogradskyi Nb-255]
 gb|ABA04265.1| Protein of unknown function DUF465 [Nitrobacter winogradskyi
           Nb-255]
          Length = 107

 Score =  117 bits (293), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 61/68 (89%), Positives = 65/68 (95%)

Query: 1   MNDQDERELIAELARLQQEHRDLDAAIDALHQSPAPDLLMLQRLKKRKLQLRDRIAFIED 60
           M D+++REL AELARLQQEHRDLDAAIDALHQSPAPDLL LQRLKKRKLQLRDRI+FIED
Sbjct: 40  MADEEDRELGAELARLQQEHRDLDAAIDALHQSPAPDLLRLQRLKKRKLQLRDRISFIED 99

Query: 61  QITPDIIA 68
           QITPDIIA
Sbjct: 100 QITPDIIA 107


>ref|YP_533803.1| hypothetical protein RPC_3958 [Rhodopseudomonas palustris BisB18]
 gb|ABD89484.1| protein of unknown function DUF465 [Rhodopseudomonas palustris
          BisB18]
          Length = 68

 Score =  117 bits (292), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 61/68 (89%), Positives = 63/68 (92%)

Query: 1  MNDQDERELIAELARLQQEHRDLDAAIDALHQSPAPDLLMLQRLKKRKLQLRDRIAFIED 60
          M D+DEREL AELA+LQQEHRDLDAAIDALH SPAPDLL LQRLKKRKL LRDRIAFIED
Sbjct: 1  MTDEDERELGAELAKLQQEHRDLDAAIDALHHSPAPDLLRLQRLKKRKLSLRDRIAFIED 60

Query: 61 QITPDIIA 68
          QITPDIIA
Sbjct: 61 QITPDIIA 68


>ref|YP_782993.1| hypothetical protein RPE_4087 [Rhodopseudomonas palustris BisA53]
 gb|ABJ08013.1| protein of unknown function DUF465 [Rhodopseudomonas palustris
          BisA53]
          Length = 69

 Score =  113 bits (282), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 60/69 (86%), Positives = 63/69 (91%), Gaps = 1/69 (1%)

Query: 1  MNDQD-ERELIAELARLQQEHRDLDAAIDALHQSPAPDLLMLQRLKKRKLQLRDRIAFIE 59
          MND D E EL+AELA+LQQEHRDLDAAIDALH SPAPDLL LQRLKKRKL LRDRI+FIE
Sbjct: 1  MNDDDNESELVAELAKLQQEHRDLDAAIDALHHSPAPDLLRLQRLKKRKLSLRDRISFIE 60

Query: 60 DQITPDIIA 68
          DQITPDIIA
Sbjct: 61 DQITPDIIA 69