BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0113.0062.p (367 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001242634.1| NAD binding site FAD dependent oxidoreductas... 618 e-175 ref|NP_773748.1| dehydrogenase [Bradyrhizobium japonicum USDA 11... 617 e-175 ref|YP_001203355.1| NAD binding site:FAD dependent oxidoreductas... 617 e-175 ref|ZP_01047080.1| FAD dependent oxidoreductase [Nitrobacter sp.... 584 e-165 ref|YP_317619.1| FAD dependent oxidoreductase [Nitrobacter winog... 572 e-161 >ref|YP_001242634.1| NAD binding site FAD dependent oxidoreductase [Bradyrhizobium sp. BTAi1] gb|ABQ38728.1| NAD binding site FAD dependent oxidoreductase [Bradyrhizobium sp. BTAi1] Length = 367 Score = 618 bits (1594), Expect = e-175, Method: Compositional matrix adjust. Identities = 300/365 (82%), Positives = 327/365 (89%) Query: 1 MDRVDCVIVGAGVIGLAVARRLAQAGREVIVIEEAEGIGTVTSSRNSEVIHAGIYYRAGS 60 MD+VDCVI+GAGV+GLA+AR LA +GREVIV+E AE IGT+TSSRNSEVIHAGIYY+AGS Sbjct: 1 MDKVDCVIIGAGVVGLAIARHLAISGREVIVLEAAEDIGTITSSRNSEVIHAGIYYKAGS 60 Query: 61 LMARMCVSGKRALYRYCAEHGVPHKNCGKLIVATTPAETEKLQSIRAHAKANGVDDMQLL 120 LMAR CVSGKR LYRYC EHGVP++NCGKLIVAT P ETEKLQ IRAHA+ANGV+ MQLL Sbjct: 61 LMARFCVSGKRMLYRYCDEHGVPYRNCGKLIVATNPTETEKLQGIRAHAEANGVEGMQLL 120 Query: 121 SGEAARALEPALNCDAALLSPSTGIIDSHAYMLALRGDAEEAGAAFAFHTPLLHARATAD 180 SG ARA+EPAL C+AALLSPSTGI+DSHAYML+LRG+ E+AG AFAF+TPLL ARAT D Sbjct: 121 SGPQARAMEPALACEAALLSPSTGILDSHAYMLSLRGEIEDAGGAFAFNTPLLRARATGD 180 Query: 181 GFEIEAGGAAPMTLACDLLVNAAGLGATAVARNVEGMPIELIPTAYLAKGNYFSCSARAP 240 EI+AGG PMTLA LLVNAAGL A AVA +E MP L+P AYLAKGNYFSCSA+AP Sbjct: 181 MIEIDAGGEQPMTLASRLLVNAAGLNAPAVAGLIESMPPALVPKAYLAKGNYFSCSAKAP 240 Query: 241 FSHLIYPVPEPGGLGVHLTLDMAGQARFGPDVQWIDHIDYAVDPDRAERFYPAIRKYWPA 300 FS LIYPVPEPGGLGVHLTLDMAGQARFGPDV+WIDHIDY VDP RAERFYPAIRKYWP Sbjct: 241 FSRLIYPVPEPGGLGVHLTLDMAGQARFGPDVEWIDHIDYTVDPSRAERFYPAIRKYWPT 300 Query: 301 LPDGALMPSYSGIRPKIVPPAVATQDFLIQGPADHGVAGLINLFGIESPGLTSSLAVADH 360 LPDGALMPSYSGIRPKIVPPAVA+QDF+IQGP DHGVAGLINLFGIESPGLTSSLA+A H Sbjct: 301 LPDGALMPSYSGIRPKIVPPAVASQDFVIQGPRDHGVAGLINLFGIESPGLTSSLAIAQH 360 Query: 361 VGELA 365 VGELA Sbjct: 361 VGELA 365 >ref|NP_773748.1| dehydrogenase [Bradyrhizobium japonicum USDA 110] dbj|BAC52373.1| dehydrogenase [Bradyrhizobium japonicum USDA 110] Length = 367 Score = 617 bits (1592), Expect = e-175, Method: Compositional matrix adjust. Identities = 307/367 (83%), Positives = 337/367 (91%) Query: 1 MDRVDCVIVGAGVIGLAVARRLAQAGREVIVIEEAEGIGTVTSSRNSEVIHAGIYYRAGS 60 MDRVDC+++GAGV+GLAVAR+LAQAGREVIV+EEAE IGT+TSSRNSEVIHAGIYYRAGS Sbjct: 1 MDRVDCIVIGAGVVGLAVARKLAQAGREVIVLEEAEAIGTITSSRNSEVIHAGIYYRAGS 60 Query: 61 LMARMCVSGKRALYRYCAEHGVPHKNCGKLIVATTPAETEKLQSIRAHAKANGVDDMQLL 120 MARMCV+GK ALYRYC E G+PHKNCGKLIVAT ETEKLQSI+AHA+ANGV DMQLL Sbjct: 61 WMARMCVNGKHALYRYCGERGIPHKNCGKLIVATNAKETEKLQSIKAHAEANGVLDMQLL 120 Query: 121 SGEAARALEPALNCDAALLSPSTGIIDSHAYMLALRGDAEEAGAAFAFHTPLLHARATAD 180 +GEAARALEPAL CDAALLSPSTGIIDSHAYML+LRG+AEEAGAAFAFHTPL+ A+A A Sbjct: 121 TGEAARALEPALACDAALLSPSTGIIDSHAYMLSLRGEAEEAGAAFAFHTPLIRAKAAAG 180 Query: 181 GFEIEAGGAAPMTLACDLLVNAAGLGATAVARNVEGMPIELIPTAYLAKGNYFSCSARAP 240 E+EAGG APM L C LLVNAAGL AT VARN++GMP++ IP AYLAKGNYFSC+A+AP Sbjct: 181 MIEVEAGGEAPMALQCSLLVNAAGLAATTVARNIDGMPLDRIPPAYLAKGNYFSCNAKAP 240 Query: 241 FSHLIYPVPEPGGLGVHLTLDMAGQARFGPDVQWIDHIDYAVDPDRAERFYPAIRKYWPA 300 FSHLIYPVPEPGGLGVHLTLDMAGQARFGPDV+WI+ I+Y VDP RAERFYPAIR+YWP Sbjct: 241 FSHLIYPVPEPGGLGVHLTLDMAGQARFGPDVEWIETINYEVDPSRAERFYPAIRRYWPT 300 Query: 301 LPDGALMPSYSGIRPKIVPPAVATQDFLIQGPADHGVAGLINLFGIESPGLTSSLAVADH 360 LPDGALMPSYSGIRPKIVPPAVATQDFL+QGP DHGVAGLINLFGIESPGLTSSLA+ADH Sbjct: 301 LPDGALMPSYSGIRPKIVPPAVATQDFLMQGPRDHGVAGLINLFGIESPGLTSSLAIADH 360 Query: 361 VGELAEL 367 V ELA + Sbjct: 361 VAELANI 367 >ref|YP_001203355.1| NAD binding site:FAD dependent oxidoreductase [Bradyrhizobium sp. ORS 278] emb|CAL75118.1| NAD binding site:FAD dependent oxidoreductase [Bradyrhizobium sp. ORS 278] Length = 367 Score = 617 bits (1592), Expect = e-175, Method: Compositional matrix adjust. Identities = 295/365 (80%), Positives = 330/365 (90%) Query: 1 MDRVDCVIVGAGVIGLAVARRLAQAGREVIVIEEAEGIGTVTSSRNSEVIHAGIYYRAGS 60 MDRVDCV++GAGV+GLA+AR+LA AGREVIV+E AE IGT TSSRNSEVIHAGIYY+AGS Sbjct: 1 MDRVDCVVIGAGVVGLAIARQLAGAGREVIVLEAAEDIGTGTSSRNSEVIHAGIYYKAGS 60 Query: 61 LMARMCVSGKRALYRYCAEHGVPHKNCGKLIVATTPAETEKLQSIRAHAKANGVDDMQLL 120 LMAR CV+GKR LYRYC EHGVP++NCGKLIVAT+PAETEKLQ IRAHA+ANGV+ M+LL Sbjct: 61 LMARFCVTGKRMLYRYCDEHGVPYRNCGKLIVATSPAETEKLQGIRAHAEANGVEGMRLL 120 Query: 121 SGEAARALEPALNCDAALLSPSTGIIDSHAYMLALRGDAEEAGAAFAFHTPLLHARATAD 180 +G AR LEPAL C+AALLSPSTGI+DSHA+ML+LRG+ E+AG A AFHTPLL A+AT D Sbjct: 121 TGSEARTLEPALACEAALLSPSTGILDSHAFMLSLRGEIEDAGGALAFHTPLLRAKATGD 180 Query: 181 GFEIEAGGAAPMTLACDLLVNAAGLGATAVARNVEGMPIELIPTAYLAKGNYFSCSARAP 240 G E+EAGG PM L+C LLVNAAGL A AVAR ++GMP +L+PTAYLAKGNYFSCSA+AP Sbjct: 181 GIELEAGGEQPMMLSCRLLVNAAGLSAPAVARGIDGMPPQLVPTAYLAKGNYFSCSAKAP 240 Query: 241 FSHLIYPVPEPGGLGVHLTLDMAGQARFGPDVQWIDHIDYAVDPDRAERFYPAIRKYWPA 300 FS LIYPVPEPGGLGVHLTLDMAGQARFGPDV+WID IDY VDP RAERFYPAIRKYWP Sbjct: 241 FSRLIYPVPEPGGLGVHLTLDMAGQARFGPDVEWIDTIDYTVDPARAERFYPAIRKYWPT 300 Query: 301 LPDGALMPSYSGIRPKIVPPAVATQDFLIQGPADHGVAGLINLFGIESPGLTSSLAVADH 360 LPDGALMPSYSGIRPKIVPPAVA+QDF++QGP DHGV GLINLFGIESPGLTSSLA+A H Sbjct: 301 LPDGALMPSYSGIRPKIVPPAVASQDFVVQGPRDHGVDGLINLFGIESPGLTSSLAIAAH 360 Query: 361 VGELA 365 VGEL+ Sbjct: 361 VGELS 365 >ref|ZP_01047080.1| FAD dependent oxidoreductase [Nitrobacter sp. Nb-311A] gb|EAQ34985.1| FAD dependent oxidoreductase [Nitrobacter sp. Nb-311A] Length = 367 Score = 584 bits (1505), Expect = e-165, Method: Compositional matrix adjust. Identities = 284/365 (77%), Positives = 322/365 (88%) Query: 1 MDRVDCVIVGAGVIGLAVARRLAQAGREVIVIEEAEGIGTVTSSRNSEVIHAGIYYRAGS 60 MDRV+CV+VGAGVIGLAVARRLA+AGREV+V+E A+ IGT TSSRNSEVIHAGIYY AGS Sbjct: 1 MDRVECVVVGAGVIGLAVARRLARAGREVVVLEAADNIGTATSSRNSEVIHAGIYYPAGS 60 Query: 61 LMARMCVSGKRALYRYCAEHGVPHKNCGKLIVATTPAETEKLQSIRAHAKANGVDDMQLL 120 LMAR CVSG+ ALY YC E+G+PH+ CGKLIVATT E ++L++IRAHA+ANGV D+QLL Sbjct: 61 LMARTCVSGRPALYTYCREYGIPHRICGKLIVATTECEVDRLRAIRAHAEANGVKDIQLL 120 Query: 121 SGEAARALEPALNCDAALLSPSTGIIDSHAYMLALRGDAEEAGAAFAFHTPLLHARATAD 180 S + ARALEPAL+C AALLSPSTGIIDSHA+MLALRGDAE GA FAF TPLL ARAT Sbjct: 121 SADQARALEPALHCVAALLSPSTGIIDSHAFMLALRGDAERDGATFAFLTPLLSARATPH 180 Query: 181 GFEIEAGGAAPMTLACDLLVNAAGLGATAVARNVEGMPIELIPTAYLAKGNYFSCSARAP 240 G EIE GG APMTLACDLL+NAAGL A AVAR ++GMP+ IP AYLAKG+YFSCS RAP Sbjct: 181 GLEIETGGDAPMTLACDLLINAAGLSAPAVARRIKGMPVGRIPPAYLAKGSYFSCSVRAP 240 Query: 241 FSHLIYPVPEPGGLGVHLTLDMAGQARFGPDVQWIDHIDYAVDPDRAERFYPAIRKYWPA 300 FS LIYPVPEPGGLGVHLTLD++GQ+RFGPDV+WI+ +Y VDP+RA RFYPAIR+YWP Sbjct: 241 FSRLIYPVPEPGGLGVHLTLDLSGQSRFGPDVEWIEIPNYDVDPERATRFYPAIRRYWPE 300 Query: 301 LPDGALMPSYSGIRPKIVPPAVATQDFLIQGPADHGVAGLINLFGIESPGLTSSLAVADH 360 LPDGAL+P+YSGIRPKIVPPAVA QDF+I+GPADHG+ GLINLFGIESPGLTSSLA+ADH Sbjct: 301 LPDGALIPAYSGIRPKIVPPAVAVQDFMIEGPADHGLPGLINLFGIESPGLTSSLAIADH 360 Query: 361 VGELA 365 V LA Sbjct: 361 VAALA 365 >ref|YP_317619.1| FAD dependent oxidoreductase [Nitrobacter winogradskyi Nb-255] gb|ABA04267.1| FAD dependent oxidoreductase [Nitrobacter winogradskyi Nb-255] Length = 368 Score = 572 bits (1475), Expect = e-161, Method: Compositional matrix adjust. Identities = 280/365 (76%), Positives = 314/365 (86%) Query: 1 MDRVDCVIVGAGVIGLAVARRLAQAGREVIVIEEAEGIGTVTSSRNSEVIHAGIYYRAGS 60 MDR++CV+VGAGVIGLAVARRLA+AGREVIV+E AE IGT TSSRNSEVIHAGIYY +GS Sbjct: 1 MDRIECVVVGAGVIGLAVARRLARAGREVIVLEAAENIGTGTSSRNSEVIHAGIYYPSGS 60 Query: 61 LMARMCVSGKRALYRYCAEHGVPHKNCGKLIVATTPAETEKLQSIRAHAKANGVDDMQLL 120 LMAR CVSG+ ALY YC EH +PH CGKLIVA T E ++LQ IRA A+ANGV+D++ L Sbjct: 61 LMARTCVSGRPALYAYCREHSIPHSMCGKLIVAATEGEVDRLQIIRAQAEANGVEDIRFL 120 Query: 121 SGEAARALEPALNCDAALLSPSTGIIDSHAYMLALRGDAEEAGAAFAFHTPLLHARATAD 180 +G+ ARALEPAL C A LLSPSTGIIDSHA+MLALRGDAE GAAFAFHTPL ARAT Sbjct: 121 NGDEARALEPALRCVAGLLSPSTGIIDSHAFMLALRGDAERDGAAFAFHTPLSGARATPH 180 Query: 181 GFEIEAGGAAPMTLACDLLVNAAGLGATAVARNVEGMPIELIPTAYLAKGNYFSCSARAP 240 G EI+ GG APMTL CDLLVNAAGL A AVAR ++GMP+E IP AYLAKG+YFSCS RAP Sbjct: 181 GLEIKTGGDAPMTLVCDLLVNAAGLDAPAVARRIDGMPVERIPPAYLAKGSYFSCSVRAP 240 Query: 241 FSHLIYPVPEPGGLGVHLTLDMAGQARFGPDVQWIDHIDYAVDPDRAERFYPAIRKYWPA 300 FS LIYPVPEPGGLGVHLTLD+AGQ RFGPDV+WI+ +Y VDP RA RFYPAIR+YWP Sbjct: 241 FSRLIYPVPEPGGLGVHLTLDLAGQPRFGPDVEWIETPNYDVDPARATRFYPAIRRYWPD 300 Query: 301 LPDGALMPSYSGIRPKIVPPAVATQDFLIQGPADHGVAGLINLFGIESPGLTSSLAVADH 360 LPD L+P+YSGIRPKIVPPAVA QDF+IQGPADHG++GLINLFGIESPGLT+SLA+ADH Sbjct: 301 LPDDTLIPAYSGIRPKIVPPAVAAQDFMIQGPADHGLSGLINLFGIESPGLTASLAIADH 360 Query: 361 VGELA 365 V LA Sbjct: 361 VAALA 365