BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0113.0043.p (162 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772774.1| hypothetical protein bll6134 [Bradyrhizobium ja... 125 3e-27 ref|YP_001241681.1| hypothetical protein BBta_5831 [Bradyrhizobi... 121 3e-26 ref|YP_001207236.1| hypothetical protein BRADO5339 [Bradyrhizobi... 110 5e-23 ref|NP_697333.1| hypothetical protein BR0299 [Brucella suis 1330... 55 3e-06 ref|ZP_06096198.1| GcrA cell cycle regulator [Brucella sp. 83/13... 55 3e-06 >ref|NP_772774.1| hypothetical protein bll6134 [Bradyrhizobium japonicum USDA 110] dbj|BAC51399.1| bll6134 [Bradyrhizobium japonicum USDA 110] Length = 193 Score = 125 bits (313), Expect = 3e-27, Method: Compositional matrix adjust. Identities = 70/167 (41%), Positives = 91/167 (54%), Gaps = 27/167 (16%) Query: 1 MEMMNWLPEHSAALQDLRARGLSYSEMADTINATFNTAYTRNAALSRAQRMGLAGLE--- 57 ME +W EHS AL+D +G+SY+E+ INA F TAYTR+A RA+R+GL + Sbjct: 19 MEPGHWPSEHSDALRDYFLKGMSYAEIGRQINARFGTAYTRSAVAGRAKRLGLVAPQWVM 78 Query: 58 --RLEPSLPGH---LDPPKPSLPELPWIGRLREGRAELTPDPLRGPKIFTETVEMPQLRC 112 + PSLPG L P +P+L LP PK + +LRC Sbjct: 79 SPSIAPSLPGEAGLLSPRRPALLNLP-------------------PKSALKPAAQVKLRC 119 Query: 113 AAVVPRHLSLLDFKPGDCRYPYGGDSEGETMTFCGHPCRKGSSYCTP 159 V PR + L++ DCRYPYGGD +GE + FCGHP + GSSYC P Sbjct: 120 VGVKPRLVQLVELAKADCRYPYGGDKDGEEIAFCGHPRQPGSSYCAP 166 >ref|YP_001241681.1| hypothetical protein BBta_5831 [Bradyrhizobium sp. BTAi1] gb|ABQ37775.1| hypothetical protein BBta_5831 [Bradyrhizobium sp. BTAi1] Length = 178 Score = 121 bits (304), Expect = 3e-26, Method: Compositional matrix adjust. Identities = 67/165 (40%), Positives = 89/165 (53%), Gaps = 16/165 (9%) Query: 1 MEMMNWLPEHSAALQDLRARGLSYSEMADTINATFNTAYTRNAALSRAQRMGLAGLERLE 60 M+ +W +HS L+DL A+GLSY+E+A +NA F T YTRNA L R +RMGLA + R Sbjct: 1 MQSTDWPDQHSMVLRDLHAKGLSYAEIARALNAQFGTTYTRNATLGRGKRMGLAPVVRQA 60 Query: 61 PSLPGHLDPPKPSLPELPWIGRLREGRAELTPDPLRGPKIFTETVEMP----QLRCAAVV 116 P P+P + G DP ++ +LRC + Sbjct: 61 ARAP----EPRPR--------SVAAGTGGRAADPATRDQVVRPAPAAAPAPVRLRCVGIS 108 Query: 117 PRHLSLLDFKPGDCRYPYGGDSEGETMTFCGHPCRKGSSYCTPIF 161 PR LS + GDCRYPYGGD + + +TFCGHP + G+SYCTP F Sbjct: 109 PRLLSFEQLEAGDCRYPYGGDRDDDPITFCGHPRQPGASYCTPHF 153 >ref|YP_001207236.1| hypothetical protein BRADO5339 [Bradyrhizobium sp. ORS 278] emb|CAL79019.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278] Length = 185 Score = 110 bits (276), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 68/168 (40%), Positives = 87/168 (51%), Gaps = 20/168 (11%) Query: 1 MEMMNWLPEHSAALQDLRARGLSYSEMADTINATFNTAYTRNAALSRAQRMGLAGLERLE 60 M+ +W HS L +L A+GLSY+E+A +NA F TAYTRNA L R +R+GL + Sbjct: 1 MQSTDWPDHHSRMLCELHAKGLSYAEIARALNAQFGTAYTRNATLGRGKRIGL-----VA 55 Query: 61 PSLPGHLDPPKPSLPELPWIGRLREGRAELTPDPLRGPKIFTETVEMP---------QLR 111 P+ G S+ P R A P R P V MP +LR Sbjct: 56 PASKGEFKAEFESVRCEP-----RAMSAAAAPG-RRSPDAGVRPVAMPRSPKAAARVKLR 109 Query: 112 CAAVVPRHLSLLDFKPGDCRYPYGGDSEGETMTFCGHPCRKGSSYCTP 159 + PR L+ P DCRYPYGGD +G+ +TFCGHP + GS YCTP Sbjct: 110 SVGISPRLLAFDQLAPDDCRYPYGGDRDGDPITFCGHPRQPGSCYCTP 157 >ref|NP_697333.1| hypothetical protein BR0299 [Brucella suis 1330] ref|YP_221086.1| hypothetical protein BruAb1_0325 [Brucella abortus bv. 1 str. 9-941] ref|YP_413797.1| hypothetical protein BAB1_0329 [Brucella melitensis biovar Abortus 2308] ref|YP_001258337.1| hypothetical protein BOV_0313 [Brucella ovis ATCC 25840] ref|YP_001592167.1| GcrA cell cycle regulator [Brucella canis ATCC 23365] ref|YP_001626988.1| GcrA cell cycle regulator [Brucella suis ATCC 23445] ref|YP_001934314.1| Pollen allergen Poa pIX/Phl pVI, C-terminal [Brucella abortus S19] ref|YP_002732079.1| GcrA cell cycle regulator [Brucella melitensis ATCC 23457] ref|ZP_05467171.1| conserved hypothetical protein [Brucella melitensis bv. 2 str. 63/9] ref|YP_003106266.1| hypothetical protein BMI_I305 [Brucella microti CCM 4915] ref|ZP_05821692.1| pollen allergen Poa pIX/Phl pVI [Brucella abortus NCTC 8038] ref|ZP_05833873.1| pollen allergen Poa pIX/Phl pVI [Brucella melitensis bv. 1 str. 16M] ref|ZP_05837550.1| pollen allergen Poa pIX/Phl pVI [Brucella suis bv. 4 str. 40] ref|ZP_05866432.1| GcrA cell cycle regulator [Brucella abortus bv. 6 str. 870] ref|ZP_05869653.1| GcrA cell cycle regulator [Brucella abortus bv. 4 str. 292] ref|ZP_05873471.1| GcrA cell cycle regulator [Brucella abortus bv. 2 str. 86/8/59] ref|ZP_05894724.1| GcrA cell cycle regulator [Brucella abortus bv. 9 str. C68] ref|ZP_05927611.1| GcrA cell cycle regulator [Brucella abortus bv. 3 str. Tulya] ref|ZP_05995362.1| GcrA cell cycle regulator [Brucella suis bv. 5 str. 513] ref|ZP_05998016.1| GcrA cell cycle regulator [Brucella suis bv. 3 str. 686] ref|ZP_06102995.1| GcrA cell cycle regulator [Brucella melitensis bv. 1 str. Rev.1] ref|ZP_06106823.1| GcrA cell cycle regulator [Brucella melitensis bv. 3 str. Ether] ref|ZP_06931428.1| hypothetical protein BAYG_00630 [Brucella abortus bv. 5 str. B3196] ref|ZP_07475084.1| GcrA cell cycle regulator [Brucella sp. BO2] ref|ZP_07477520.1| GcrA cell cycle regulator [Brucella sp. BO1] gb|AAN29248.1| conserved hypothetical protein [Brucella suis 1330] gb|AAX73725.1| conserved hypothetical protein [Brucella abortus bv. 1 str. 9-941] emb|CAJ10285.1| Pollen allergen Poa pIX/Phl pVI, C-terminal [Brucella melitensis biovar Abortus 2308] gb|ABQ60580.1| conserved hypothetical protein [Brucella ovis ATCC 25840] gb|ABX61396.1| GcrA cell cycle regulator [Brucella canis ATCC 23365] gb|ABY37418.1| GcrA cell cycle regulator [Brucella suis ATCC 23445] gb|ACD71840.1| Pollen allergen Poa pIX/Phl pVI, C-terminal [Brucella abortus S19] gb|ACO00125.1| GcrA cell cycle regulator [Brucella melitensis ATCC 23457] gb|ACU47317.1| hypothetical protein BMI_I305 [Brucella microti CCM 4915] gb|EEW81233.1| pollen allergen Poa pIX/Phl pVI [Brucella abortus NCTC 8038] gb|EEW88495.1| pollen allergen Poa pIX/Phl pVI [Brucella melitensis bv. 1 str. 16M] gb|EEW91678.1| pollen allergen Poa pIX/Phl pVI [Brucella suis bv. 4 str. 40] gb|EEX54563.1| GcrA cell cycle regulator [Brucella abortus bv. 4 str. 292] gb|EEX58381.1| GcrA cell cycle regulator [Brucella abortus bv. 2 str. 86/8/59] gb|EEX61013.1| GcrA cell cycle regulator [Brucella abortus bv. 6 str. 870] gb|EEX79707.1| GcrA cell cycle regulator [Brucella abortus bv. 9 str. C68] gb|EEX81798.1| GcrA cell cycle regulator [Brucella abortus bv. 3 str. Tulya] gb|EEY29332.1| GcrA cell cycle regulator [Brucella suis bv. 5 str. 513] gb|EEY31986.1| GcrA cell cycle regulator [Brucella suis bv. 3 str. 686] gb|EEZ11168.1| GcrA cell cycle regulator [Brucella melitensis bv. 3 str. Ether] gb|EEZ13797.1| GcrA cell cycle regulator [Brucella melitensis bv. 1 str. Rev.1] gb|EEZ18715.1| conserved hypothetical protein [Brucella melitensis bv. 2 str. 63/9] gb|EFH34226.1| hypothetical protein BAYG_00630 [Brucella abortus bv. 5 str. B3196] gb|EFM56360.1| GcrA cell cycle regulator [Brucella sp. BO1] gb|EFM58769.1| GcrA cell cycle regulator [Brucella sp. BO2] gb|ADZ65407.1| Pollen allergen Poa pIX/Phl pVI, C-terminal protein [Brucella melitensis M28] gb|ADZ86271.1| GcrA cell cycle regulator [Brucella melitensis M5-90] gb|AEM17661.1| hypothetical protein BS1330_I0300 [Brucella suis 1330] Length = 180 Score = 55.5 bits (132), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 65/169 (38%), Gaps = 20/169 (11%) Query: 4 MNWLPEHSAALQDLRARGLSYSEMADTINATFNTAYTRNAALSRAQRMGLAGLERLEPSL 63 MNW E L+ L + GLS S++A + +RNA + + R+ L+G + + Sbjct: 1 MNWTDERVELLKKLWSEGLSASQIAAQLGGV-----SRNAVIGKVHRLKLSGRGKTTTAA 55 Query: 64 PGHLDPPKPSLPELPWIGRLREGRAELTPDPLRGPK--------------IFTETVEMPQ 109 P P+ P + G T K + ETV P Sbjct: 56 PRSKKVNTPAAAPRPAVQNNNSGTHTTTMRTATVTKTVGATALQMEYATEVVAETVIKPA 115 Query: 110 LRCAAVVPRHLSLLDFKPGDCRYPYGGDSEGETMTFCGHPCRKGSSYCT 158 + RHL+LL C++P GD E FCG+ + S YC+ Sbjct: 116 SDVVVPISRHLTLLQLSERTCKWPI-GDPLNEDFHFCGNESGEASPYCS 163 >ref|ZP_06096198.1| GcrA cell cycle regulator [Brucella sp. 83/13] ref|ZP_07471146.1| GcrA cell cycle regulator [Brucella sp. NF 2653] gb|EEZ32316.1| GcrA cell cycle regulator [Brucella sp. 83/13] gb|EFM62824.1| GcrA cell cycle regulator [Brucella sp. NF 2653] Length = 180 Score = 55.1 bits (131), Expect = 3e-06, Method: Compositional matrix adjust. Identities = 43/169 (25%), Positives = 65/169 (38%), Gaps = 20/169 (11%) Query: 4 MNWLPEHSAALQDLRARGLSYSEMADTINATFNTAYTRNAALSRAQRMGLAGLERLEPSL 63 MNW E L+ L + GLS S++A + +RNA + + R+ L+G + + Sbjct: 1 MNWTDERVELLKKLWSEGLSASQIAAQLGGV-----SRNAVIGKVHRLKLSGRGKTTTAA 55 Query: 64 PGHLDPPKPSLPELPWIGRLREGRAELTPDPLRGPK--------------IFTETVEMPQ 109 P P+ P + G T K + ETV P Sbjct: 56 PRSKKVNTPAAALRPAVQNNNSGTHTTTMRTATVTKTVGATALQMEYATEVVAETVIKPA 115 Query: 110 LRCAAVVPRHLSLLDFKPGDCRYPYGGDSEGETMTFCGHPCRKGSSYCT 158 + RHL+LL C++P GD E FCG+ + S YC+ Sbjct: 116 SDVVVPISRHLTLLQLSERTCKWPI-GDPLNEDFHFCGNESGEASPYCS 163