BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0113.0039.p (284 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_949893.1| putative citrate lyase subunit beta [Rhodopseud... 364 9e-99 ref|YP_001994003.1| Citryl-CoA lyase [Rhodopseudomonas palustris... 362 3e-98 ref|YP_567745.1| Citryl-CoA lyase [Rhodopseudomonas palustris Bi... 357 1e-96 ref|NP_773437.1| citrate lyase [Bradyrhizobium japonicum USDA 11... 340 2e-91 ref|YP_004111022.1| citryl-coA lyase [Rhodopseudomonas palustris... 339 3e-91 >ref|NP_949893.1| putative citrate lyase subunit beta [Rhodopseudomonas palustris CGA009] emb|CAE29999.1| putative citrate lyase beta chain [Rhodopseudomonas palustris CGA009] Length = 282 Score = 364 bits (934), Expect = 9e-99, Method: Compositional matrix adjust. Identities = 183/281 (65%), Positives = 222/281 (79%), Gaps = 1/281 (0%) Query: 1 MRSFLFVPGDSTRKYESAKKTAADALILDLEDSIAPDQKVVARSITRQMLDARNPEQKLY 60 MRS LFVPGDS RK+E A + ADALI+DLEDS+ ++K AR +TR ML A +QKLY Sbjct: 1 MRSMLFVPGDSPRKFEKASQGGADALIIDLEDSVVTEKKDEARGLTRTMLQAPRGQQKLY 60 Query: 61 IRVNALDTDLTLGDLAAVMSGKPDGIVLPKCAGAADVNRLALYLDAFEAASDIAQGTTRI 120 +RVNALDT TLGDLAAVM +PDGIVLPK DV +AL+LDAFEAA+ I GTTRI Sbjct: 61 VRVNALDTGRTLGDLAAVMPARPDGIVLPKSRSGDDVRNVALWLDAFEAAAGIELGTTRI 120 Query: 121 VTVATETARAVLKILDFENMSPRLWGMMWGAEDLAASLGATRNRSDGRYHSPFILARDLC 180 V VATETA ++ + +++ SPRL G+MWGAEDLAASLGAT N S G +HSP+ LARDLC Sbjct: 121 VVVATETAGSIFGLGSYKDCSPRLAGLMWGAEDLAASLGATENGSGGVFHSPYRLARDLC 180 Query: 181 LIGAAAAGVVAIDTIATDINDLDALKAEAIAARQDGFLAKAVIHPKHVDVVNAAFMPTDE 240 L+GAAAA V AIDT+ TDI++L L+AE AAR+DGF KA+IHPKHVD+VNAAF PT+ Sbjct: 181 LMGAAAADVTAIDTVYTDIDNLAGLEAETRAARRDGFTCKALIHPKHVDIVNAAFAPTEA 240 Query: 241 EIAWSERVIAAFANNP-SGVAKMDGKMLDKPHLRAAEKILA 280 E +W+E+VIAAFA+NP +G ++DGKMLDKPHLRAA+KIL Sbjct: 241 ERSWAEKVIAAFADNPDAGTLRLDGKMLDKPHLRAAQKILG 281 >ref|YP_001994003.1| Citryl-CoA lyase [Rhodopseudomonas palustris TIE-1] gb|ACF03528.1| Citryl-CoA lyase [Rhodopseudomonas palustris TIE-1] Length = 282 Score = 362 bits (930), Expect = 3e-98, Method: Compositional matrix adjust. Identities = 183/281 (65%), Positives = 221/281 (78%), Gaps = 1/281 (0%) Query: 1 MRSFLFVPGDSTRKYESAKKTAADALILDLEDSIAPDQKVVARSITRQMLDARNPEQKLY 60 MRS LFVPGDS RK+E A + ADALI+DLEDS+ ++K AR +TR ML A +QKLY Sbjct: 1 MRSMLFVPGDSPRKFEKASQGGADALIIDLEDSVVIEKKDDARGLTRTMLQAPRGQQKLY 60 Query: 61 IRVNALDTDLTLGDLAAVMSGKPDGIVLPKCAGAADVNRLALYLDAFEAASDIAQGTTRI 120 +RVNALDT TLGDLAAVM +PDGIVLPK DV +AL+LDAFEAA+ I GTTRI Sbjct: 61 VRVNALDTGRTLGDLAAVMPARPDGIVLPKSRSGNDVRNVALWLDAFEAAAGIELGTTRI 120 Query: 121 VTVATETARAVLKILDFENMSPRLWGMMWGAEDLAASLGATRNRSDGRYHSPFILARDLC 180 V VATETA ++ + +++ SPRL G+MWGAEDLAASLGAT N S G +HSP+ LARDLC Sbjct: 121 VVVATETAGSIFGLGSYKDCSPRLAGLMWGAEDLAASLGATENGSGGVFHSPYRLARDLC 180 Query: 181 LIGAAAAGVVAIDTIATDINDLDALKAEAIAARQDGFLAKAVIHPKHVDVVNAAFMPTDE 240 L+GAAAA V AIDT+ TDI++L L+AE AAR+DGF KA+IHPKHVD+VNAAF PT+ Sbjct: 181 LMGAAAADVTAIDTVYTDIDNLAGLEAETRAARRDGFTCKALIHPKHVDIVNAAFAPTEA 240 Query: 241 EIAWSERVIAAFANNP-SGVAKMDGKMLDKPHLRAAEKILA 280 E W+E+VIAAFA+NP +G ++DGKMLDKPHLRAA+KIL Sbjct: 241 ERTWAEKVIAAFADNPDAGTLRLDGKMLDKPHLRAAQKILG 281 >ref|YP_567745.1| Citryl-CoA lyase [Rhodopseudomonas palustris BisB5] gb|ABE37844.1| Citryl-CoA lyase [Rhodopseudomonas palustris BisB5] Length = 282 Score = 357 bits (916), Expect = 1e-96, Method: Compositional matrix adjust. Identities = 179/282 (63%), Positives = 220/282 (78%), Gaps = 1/282 (0%) Query: 1 MRSFLFVPGDSTRKYESAKKTAADALILDLEDSIAPDQKVVARSITRQMLDARNPEQKLY 60 MRS LFVPGDS RK+E A + AADALI+DLEDS+ D+K AR +TR ML A + +LY Sbjct: 1 MRSMLFVPGDSPRKFEKASQGAADALIIDLEDSVVTDRKDDARGMTRTMLHAPRGKPQLY 60 Query: 61 IRVNALDTDLTLGDLAAVMSGKPDGIVLPKCAGAADVNRLALYLDAFEAASDIAQGTTRI 120 +RVNALDT TLGDLAAVM +PDGIVLPK G DV +AL+LDAFEAA+ + G+TRI Sbjct: 61 VRVNALDTGRTLGDLAAVMPARPDGIVLPKSRGGEDVRMVALWLDAFEAAAGLTPGSTRI 120 Query: 121 VTVATETARAVLKILDFENMSPRLWGMMWGAEDLAASLGATRNRSDGRYHSPFILARDLC 180 V VATETA ++ + +++ SPRL G+MWGAEDLAASLGAT N S G +HSP+ LARDLC Sbjct: 121 VVVATETAGSIFGLGSYKDCSPRLAGLMWGAEDLAASLGATENGSGGVFHSPYRLARDLC 180 Query: 181 LIGAAAAGVVAIDTIATDINDLDALKAEAIAARQDGFLAKAVIHPKHVDVVNAAFMPTDE 240 L+GAAAA V AIDT+ TDI++L L+ E AAR+DGF KA+IHPKHVD+VNAAF PT Sbjct: 181 LMGAAAAEVTAIDTVYTDIDNLAGLEQETRAARRDGFTCKALIHPKHVDIVNAAFAPTAA 240 Query: 241 EIAWSERVIAAFANNP-SGVAKMDGKMLDKPHLRAAEKILAS 281 E W+E+V+AAFA NP +G ++DGKMLDKPHLRAA++IL + Sbjct: 241 ERGWAEKVVAAFAENPDAGTLRLDGKMLDKPHLRAAQRILGT 282 >ref|NP_773437.1| citrate lyase [Bradyrhizobium japonicum USDA 110] dbj|BAC52062.1| blr6797 [Bradyrhizobium japonicum USDA 110] Length = 296 Score = 340 bits (872), Expect = 2e-91, Method: Compositional matrix adjust. Identities = 173/281 (61%), Positives = 215/281 (76%), Gaps = 1/281 (0%) Query: 1 MRSFLFVPGDSTRKYESAKKTAADALILDLEDSIAPDQKVVARSITRQMLDARNPEQKLY 60 MRS LFVPGDS RK+E A + ADALI+DLEDS+ ++K AR +T ML +R +LY Sbjct: 14 MRSMLFVPGDSPRKFEKASEGKADALIIDLEDSVVTEKKAEARGLTLAMLKSRPGPHQLY 73 Query: 61 IRVNALDTDLTLGDLAAVMSGKPDGIVLPKCAGAADVNRLALYLDAFEAASDIAQGTTRI 120 +RVNALDT +TL DLAAVM G+PDGIVLPK G DV ++A +L+A EAA+ I G TRI Sbjct: 74 VRVNALDTGMTLADLAAVMPGRPDGIVLPKSQGGDDVRQVATWLEALEAAAGITVGATRI 133 Query: 121 VTVATETARAVLKILDFENMSPRLWGMMWGAEDLAASLGATRNRSDGRYHSPFILARDLC 180 V VATETA ++ + ++ SPRL G+MWGAEDL+ASLGAT S G +HSP+ LARDLC Sbjct: 134 VCVATETAGSIFGLGSYKGCSPRLAGLMWGAEDLSASLGATEKSSGGVFHSPYRLARDLC 193 Query: 181 LIGAAAAGVVAIDTIATDINDLDALKAEAIAARQDGFLAKAVIHPKHVDVVNAAFMPTDE 240 L+ AAAA V IDT+ TDI++L L+ E AAR+DGF AKA+IHPKHVDVVNAAF PT+ Sbjct: 194 LMAAAAAEVAPIDTVYTDIDNLAGLEQETRAARRDGFSAKALIHPKHVDVVNAAFEPTEA 253 Query: 241 EIAWSERVIAAFANNP-SGVAKMDGKMLDKPHLRAAEKILA 280 E +W+E+VIAAFA NP SG ++DG+M+DKPHLRAA+KIL Sbjct: 254 ERSWAEKVIAAFAGNPNSGTLRLDGQMIDKPHLRAAKKILG 294 >ref|YP_004111022.1| citryl-coA lyase [Rhodopseudomonas palustris DX-1] gb|ADU46289.1| Citryl-CoA lyase [Rhodopseudomonas palustris DX-1] Length = 285 Score = 339 bits (870), Expect = 3e-91, Method: Compositional matrix adjust. Identities = 178/281 (63%), Positives = 219/281 (77%), Gaps = 1/281 (0%) Query: 1 MRSFLFVPGDSTRKYESAKKTAADALILDLEDSIAPDQKVVARSITRQMLDARNPEQKLY 60 MRS LFVPGDS RK++ + AADALILDLEDS+ P++K AR++TR ML A Q+LY Sbjct: 1 MRSMLFVPGDSPRKFDKVVQGAADALILDLEDSVVPEKKDEARTLTRTMLQAPRTGQQLY 60 Query: 61 IRVNALDTDLTLGDLAAVMSGKPDGIVLPKCAGAADVNRLALYLDAFEAASDIAQGTTRI 120 +RVNALD+ TL DLAAVM PDGIVLPK G +V L L+LDAFEAA+ +A GTTRI Sbjct: 61 VRVNALDSGRTLDDLAAVMPAAPDGIVLPKSRGGDEVRTLTLWLDAFEAAARLAAGTTRI 120 Query: 121 VTVATETARAVLKILDFENMSPRLWGMMWGAEDLAASLGATRNRSDGRYHSPFILARDLC 180 V VATETA A+ + +++ SPRL G+MWGAEDLAASLGA++NRS G HSP+ LARDLC Sbjct: 121 VVVATETAGAIFGLGSYQDCSPRLEGLMWGAEDLAASLGASQNRSGGELHSPYRLARDLC 180 Query: 181 LIGAAAAGVVAIDTIATDINDLDALKAEAIAARQDGFLAKAVIHPKHVDVVNAAFMPTDE 240 L+GAAAAGV AID + TDI+DL L+ E AAR+DGF AKA+IHPK V++VNAAF PT Sbjct: 181 LMGAAAAGVTAIDAVYTDIDDLAGLEQETRAARRDGFGAKALIHPKQVEIVNAAFAPTAA 240 Query: 241 EIAWSERVIAAF-ANNPSGVAKMDGKMLDKPHLRAAEKILA 280 E AW+E+V+AAF AN +G ++DG+M+D+PHLRAAEKIL Sbjct: 241 ERAWAEKVVAAFAANRDAGTLRLDGRMIDRPHLRAAEKILG 281