BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0113.0035.p (238 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769827.1| ABC transporter ATP-binding protein [Bradyrhizo... 421 e-116 ref|YP_002498641.1| ABC transporter-like protein [Methylobacteri... 334 8e-90 ref|ZP_02191981.1| ABC transporter ATP-binding protein [alpha pr... 309 3e-82 ref|YP_004417798.1| ABC transporter ATP-binding protein [Pusilli... 308 4e-82 ref|YP_003910329.1| ABC transporter-like protein [Burkholderia s... 246 2e-63 >ref|NP_769827.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] dbj|BAC48452.1| ABC transporter ATP-binding protein [Bradyrhizobium japonicum USDA 110] Length = 237 Score = 421 bits (1082), Expect = e-116, Method: Compositional matrix adjust. Identities = 206/238 (86%), Positives = 223/238 (93%), Gaps = 1/238 (0%) Query: 1 MSAQPVVQVEDLDVYYGTSQILFGVGLSVRQGETMALLGRNGAGKSTTMKAIMGLAPAHR 60 MSA +++V DLDVYYGTSQILFGVGLSVRQGETMALLGRNGAGKSTTMKAIMGLAP R Sbjct: 1 MSAA-IIEVADLDVYYGTSQILFGVGLSVRQGETMALLGRNGAGKSTTMKAIMGLAPPRR 59 Query: 61 GRVTLRGQVVSGMRPHHIARAGLGFVPEDRQIFPEHTVEDNLVIGQKKGPDGEDEWSIRR 120 GRV+LRG V+SG +PHHIARAGLGFVPEDRQIFPEHTVEDNLVIG+KKGP+G+DEW I+R Sbjct: 60 GRVSLRGAVISGRKPHHIARAGLGFVPEDRQIFPEHTVEDNLVIGRKKGPEGQDEWPIKR 119 Query: 121 VYDVFPLLEPLRHRIAGRLSGGEQQMTAIARTLMGNPVLLLLDEPSEGLAPIIVQRIGEL 180 +Y+VFPLLEPLRHRIAGRLSGGEQQM AIARTLMGNP LLLLDEPSEGLAPIIVQRIGEL Sbjct: 120 IYEVFPLLEPLRHRIAGRLSGGEQQMLAIARTLMGNPALLLLDEPSEGLAPIIVQRIGEL 179 Query: 181 LRQLRGTGATVLIAEQNMHFCLGLASHATVIDKGQIVYTSSIEELKANDNIRQRYLAL 238 LRQLR G+TVLIAEQNMHFCLGLASHATVIDKGQIVY + I+ELKAN+ IR+RYLAL Sbjct: 180 LRQLRQLGSTVLIAEQNMHFCLGLASHATVIDKGQIVYAAGIDELKANEAIRRRYLAL 237 >ref|YP_002498641.1| ABC transporter-like protein [Methylobacterium nodulans ORS 2060] gb|ACL58338.1| ABC transporter related [Methylobacterium nodulans ORS 2060] Length = 237 Score = 334 bits (856), Expect = 8e-90, Method: Compositional matrix adjust. Identities = 158/236 (66%), Positives = 193/236 (81%) Query: 3 AQPVVQVEDLDVYYGTSQILFGVGLSVRQGETMALLGRNGAGKSTTMKAIMGLAPAHRGR 62 A P+++V DV+YG SQILFG+ LSV +G+TMALLGRNGAGKSTT KAI GLAP RG Sbjct: 2 AAPMLEVRGADVFYGASQILFGLDLSVERGQTMALLGRNGAGKSTTFKAIAGLAPPRRGE 61 Query: 63 VTLRGQVVSGMRPHHIARAGLGFVPEDRQIFPEHTVEDNLVIGQKKGPDGEDEWSIRRVY 122 + L G VSG P+ IARAG+G+VPEDRQIFPEHTVEDNL++G K+GP GE W++ R+Y Sbjct: 62 IRLAGVPVSGKAPYRIARAGIGYVPEDRQIFPEHTVEDNLIVGAKRGPRGEAHWTLTRIY 121 Query: 123 DVFPLLEPLRHRIAGRLSGGEQQMTAIARTLMGNPVLLLLDEPSEGLAPIIVQRIGELLR 182 +VFPLL +R R+AGRLSGGEQQM IAR LMGNP +LLLDEPSEGLAPIIVQ IG L+R Sbjct: 122 EVFPLLAGMRTRMAGRLSGGEQQMLTIARALMGNPDILLLDEPSEGLAPIIVQAIGGLIR 181 Query: 183 QLRGTGATVLIAEQNMHFCLGLASHATVIDKGQIVYTSSIEELKANDNIRQRYLAL 238 +RG G T+L+AEQNMHFCL +A+HATV+DKGQ+VY + + EL++N I QR+LA+ Sbjct: 182 TMRGMGVTILLAEQNMHFCLDVATHATVVDKGQVVYCAPMAELRSNAAITQRFLAV 237 >ref|ZP_02191981.1| ABC transporter ATP-binding protein [alpha proteobacterium BAL199] gb|EDP61271.1| ABC transporter ATP-binding protein [alpha proteobacterium BAL199] Length = 238 Score = 309 bits (791), Expect = 3e-82, Method: Compositional matrix adjust. Identities = 144/238 (60%), Positives = 186/238 (78%) Query: 1 MSAQPVVQVEDLDVYYGTSQILFGVGLSVRQGETMALLGRNGAGKSTTMKAIMGLAPAHR 60 MS ++ V+ +DV+YG S+ILFGV L + +G T+ALLGRNGAGKSTT+KAI G+A + Sbjct: 1 MSTDTILTVQGIDVFYGASKILFGVDLEIGRGRTLALLGRNGAGKSTTLKAIAGIAKPRK 60 Query: 61 GRVTLRGQVVSGMRPHHIARAGLGFVPEDRQIFPEHTVEDNLVIGQKKGPDGEDEWSIRR 120 G V L ++G RP IARAG+G+VPEDRQ+FP H+VEDNL+IG K+GPDG+D W++ + Sbjct: 61 GSVRLGATELAGARPDVIARAGIGYVPEDRQVFPMHSVEDNLLIGAKRGPDGQDAWTLEK 120 Query: 121 VYDVFPLLEPLRHRIAGRLSGGEQQMTAIARTLMGNPVLLLLDEPSEGLAPIIVQRIGEL 180 VY+ FP+L ++ R AG +SGGEQQM IARTLMGNP +LLLDEPSEGLAPIIVQ I L Sbjct: 121 VYEAFPILAQMKERRAGLMSGGEQQMLTIARTLMGNPEVLLLDEPSEGLAPIIVQSIAAL 180 Query: 181 LRQLRGTGATVLIAEQNMHFCLGLASHATVIDKGQIVYTSSIEELKANDNIRQRYLAL 238 +R LR G T+++AEQNMHFCLG++ A VIDKG IVY +I+ L+AN+ + +RYLAL Sbjct: 181 IRTLRAMGVTIVLAEQNMHFCLGISEDAAVIDKGHIVYRDTIKGLRANEAVTKRYLAL 238 >ref|YP_004417798.1| ABC transporter ATP-binding protein [Pusillimonas sp. T7-7] gb|AEC21174.1| ABC transporter ATP-binding protein [Pusillimonas sp. T7-7] Length = 242 Score = 308 bits (789), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 140/237 (59%), Positives = 188/237 (79%) Query: 2 SAQPVVQVEDLDVYYGTSQILFGVGLSVRQGETMALLGRNGAGKSTTMKAIMGLAPAHRG 61 +A PV++V+ +D +Y +SQ+LFG+ S+ +GET+ALLGRNGAGKSTTMK++ G+ +G Sbjct: 6 AAAPVLKVDGIDAFYDSSQVLFGLSFSLHKGETLALLGRNGAGKSTTMKSVAGIVRGRQG 65 Query: 62 RVTLRGQVVSGMRPHHIARAGLGFVPEDRQIFPEHTVEDNLVIGQKKGPDGEDEWSIRRV 121 ++L G+ + G PH IARAG+ FVPEDRQIFPE +VEDNL+I K+G GE EW++ RV Sbjct: 66 SISLAGKDIRGRAPHQIARAGIAFVPEDRQIFPELSVEDNLLIATKRGTHGESEWTLERV 125 Query: 122 YDVFPLLEPLRHRIAGRLSGGEQQMTAIARTLMGNPVLLLLDEPSEGLAPIIVQRIGELL 181 YD+ LL+PLR R+ G+LSGGEQQM + R LMGNP ++LLDEPSEGLAPI+VQ+IGEL+ Sbjct: 126 YDMLSLLKPLRTRLGGQLSGGEQQMLTVGRALMGNPSVILLDEPSEGLAPIMVQKIGELI 185 Query: 182 RQLRGTGATVLIAEQNMHFCLGLASHATVIDKGQIVYTSSIEELKANDNIRQRYLAL 238 LR G T+++AEQN+HFCLGLA HA VIDKG+ V+ +I+EL +D I+QRYL++ Sbjct: 186 GALRELGTTIVLAEQNLHFCLGLADHAVVIDKGKDVFYGTIDELSRSDEIKQRYLSV 242 >ref|YP_003910329.1| ABC transporter-like protein [Burkholderia sp. CCGE1003] gb|ADN61038.1| ABC transporter related protein [Burkholderia sp. CCGE1003] Length = 237 Score = 246 bits (628), Expect = 2e-63, Method: Compositional matrix adjust. Identities = 114/236 (48%), Positives = 176/236 (74%) Query: 3 AQPVVQVEDLDVYYGTSQILFGVGLSVRQGETMALLGRNGAGKSTTMKAIMGLAPAHRGR 62 ++P+++V L+ +YG + ILF VGL V +GE +AL+GRNGAGKSTTMKAIMGL P RG+ Sbjct: 2 SEPMLKVAGLNAFYGRAHILFDVGLEVGRGEVVALMGRNGAGKSTTMKAIMGLLPRRRGQ 61 Query: 63 VTLRGQVVSGMRPHHIARAGLGFVPEDRQIFPEHTVEDNLVIGQKKGPDGEDEWSIRRVY 122 VT RGQ ++ + P+ IAR G+GFVPEDR++F + TV +NL G++ +G +W+ +++ Sbjct: 62 VTFRGQNIAALPPYRIARMGMGFVPEDRRVFADLTVMENLDTGRQPPREGAPQWTPEKLF 121 Query: 123 DVFPLLEPLRHRIAGRLSGGEQQMTAIARTLMGNPVLLLLDEPSEGLAPIIVQRIGELLR 182 +FP L + R G++SGGEQQM ++RTLMGNP L+LLDEPSEG+AP+IV+++ ++ Sbjct: 122 RLFPNLGEMPRRPGGQMSGGEQQMLTVSRTLMGNPYLVLLDEPSEGVAPVIVEQMANMIL 181 Query: 183 QLRGTGATVLIAEQNMHFCLGLASHATVIDKGQIVYTSSIEELKANDNIRQRYLAL 238 +L+ G ++L++EQN+HF ++ A V++KGQI ++ +I EL N+ +R+ YL++ Sbjct: 182 ELKREGLSILLSEQNLHFAELVSDRAYVLEKGQIRFSGAIGELAKNETVRRAYLSV 237