BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0113.0026.p (212 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_769821.1| transcriptional regulator [Bradyrhizobium japon... 345 4e-93 ref|ZP_01037615.1| transcriptional regulatory protein [Roseovari... 172 4e-41 emb|CCA86449.1| putative transcriptional regulator, TetR-like [R... 168 4e-40 ref|ZP_02191977.1| transcriptional regulatory protein [alpha pro... 167 1e-39 ref|YP_004417795.1| transcriptional regulatory protein [Pusillim... 160 2e-37 >ref|NP_769821.1| transcriptional regulator [Bradyrhizobium japonicum USDA 110] dbj|BAC48446.1| transcriptional regulatory protein [Bradyrhizobium japonicum USDA 110] Length = 213 Score = 345 bits (884), Expect = 4e-93, Method: Compositional matrix adjust. Identities = 174/207 (84%), Positives = 187/207 (90%), Gaps = 3/207 (1%) Query: 1 MTQATSAKVTKLNRVERXRYPG--IFDAATKVVGKYGYAEASVARITEAAGVAQGTFYNH 58 MTQA +AKVTKLNRVER + IFDAATKVVGK+GYAEASVARITE AGVAQGTFYNH Sbjct: 1 MTQA-NAKVTKLNRVERNAWTKQKIFDAATKVVGKHGYAEASVARITEQAGVAQGTFYNH 59 Query: 59 FENRQELLDQLLPKIGLDMVRFIHARTGTASEARQEVERFSAFFDFIREVPEFLRILNEA 118 FENRQELLDQLLPKIGLDMV FI ARTGTA ARQE+ERFSAFFDFIREVPEFLRILNEA Sbjct: 60 FENRQELLDQLLPKIGLDMVGFIRARTGTADAARQEIERFSAFFDFIREVPEFLRILNEA 119 Query: 119 EFFAPIGYQKHFDNISSAYVRILQRARAAGATNAFSDEEFEAIVQVLMGARGYLSRRYSY 178 EFFAPIGYQKH DNIS AYVRIL+RAR AGA +SDEEFEAIV +LMGARGYLSRRYSY Sbjct: 120 EFFAPIGYQKHLDNISVAYVRILRRARLAGAIEDYSDEEFEAIVHMLMGARGYLSRRYSY 179 Query: 179 SERGVTAVPDYVITAYQKLVTRGLFTT 205 SE GVTAVPD+VI+AY+KL+TRGLF++ Sbjct: 180 SEGGVTAVPDHVISAYRKLMTRGLFSS 206 >ref|ZP_01037615.1| transcriptional regulatory protein [Roseovarius sp. 217] gb|EAQ23802.1| transcriptional regulatory protein [Roseovarius sp. 217] Length = 198 Score = 172 bits (435), Expect = 4e-41, Method: Compositional matrix adjust. Identities = 83/183 (45%), Positives = 121/183 (66%), Gaps = 1/183 (0%) Query: 22 GIFDAATKVVGKYGYAEASVARITEAAGVAQGTFYNHFENRQELLDQLLPKIGLDMVRFI 81 +FDAA KVVG +GYA++ ++ + + A VAQGTFYN+FE+R+ L D+LLP +G +++ +I Sbjct: 4 ALFDAAVKVVGTFGYAKSKISAVADEANVAQGTFYNYFESREALFDELLPALGEELLNYI 63 Query: 82 HARTGTASE-ARQEVERFSAFFDFIREVPEFLRILNEAEFFAPIGYQKHFDNISSAYVRI 140 A+T A A +E++ F AFF F++ PEF RIL EAE FAP YQ+H D +++ YVR Sbjct: 64 SAQTADAENFADREIKSFRAFFSFLKIRPEFYRILYEAEVFAPEAYQRHMDRVANGYVRT 123 Query: 141 LQRARAAGATNAFSDEEFEAIVQVLMGARGYLSRRYSYSERGVTAVPDYVITAYQKLVTR 200 L+RA A G E EA+ +LMGAR YL RY+ +E + +PD+V+ Y V Sbjct: 124 LKRAAAHGELREADTESLEALSYILMGARHYLCMRYARAENEMLDLPDWVLNVYVDRVVN 183 Query: 201 GLF 203 G++ Sbjct: 184 GIY 186 >emb|CCA86449.1| putative transcriptional regulator, TetR-like [Ralstonia syzygii R24] Length = 188 Score = 168 bits (426), Expect = 4e-40, Method: Compositional matrix adjust. Identities = 85/185 (45%), Positives = 117/185 (63%), Gaps = 1/185 (0%) Query: 26 AATKVVGKYGYAEASVARITEAAGVAQGTFYNHFENRQELLDQLLPKIGLDMVRFIHAR- 84 AA +VVG+ GYAEAS+ IT+ AGV QGTFYN+F++RQ++LD LLP +G M+ ++H + Sbjct: 3 AAAEVVGEVGYAEASITMITQRAGVGQGTFYNYFKSRQDILDTLLPDLGEQMLGYVHEKA 62 Query: 85 TGTASEARQEVERFSAFFDFIREVPEFLRILNEAEFFAPIGYQKHFDNISSAYVRILQRA 144 G E F AFFDFI++ P F RILNEAE FAP+G+Q+H DN++ Y+R L+R+ Sbjct: 63 VGGLGFPDLEERSFRAFFDFIKQTPHFSRILNEAESFAPVGFQRHLDNVARRYIRFLKRS 122 Query: 145 RAAGATNAFSDEEFEAIVQVLMGARGYLSRRYSYSERGVTAVPDYVITAYQKLVTRGLFT 204 +G +S+ E E I +LM AR YLS+RY+ + +P AY K V GL Sbjct: 123 VKSGEFTEYSEAELEVIAYMLMAARSYLSQRYTTDDGRNVELPQSGAKAYMKFVLYGLMG 182 Query: 205 TSDKG 209 G Sbjct: 183 QPRSG 187 >ref|ZP_02191977.1| transcriptional regulatory protein [alpha proteobacterium BAL199] gb|EDP61267.1| transcriptional regulatory protein [alpha proteobacterium BAL199] Length = 199 Score = 167 bits (422), Expect = 1e-39, Method: Compositional matrix adjust. Identities = 94/203 (46%), Positives = 128/203 (63%), Gaps = 12/203 (5%) Query: 12 LNRVERXR--YPGIFDAATKVVGKYGYAEASVARITEAAGVAQGTFYNHFENRQELLDQL 69 ++R E+ R Y + ++A +VVG+ GYA+ASV++IT AGVAQGTFYN+FE RQ++LD+L Sbjct: 1 MSRDEKARDTYKRLLESAARVVGEDGYADASVSKITRLAGVAQGTFYNYFETRQDVLDRL 60 Query: 70 LPKIGLDMVRFI-----HARTGTASEARQEVERFSAFFDFIREVPEFLRILNEAEFFAPI 124 LP +G M+ I H TG A +E RF AFFD++ E P F RIL EAE FAP Sbjct: 61 LPYMGRQMLDHIGRSLAHDLTG----AEREEARFRAFFDYLNEHPAFYRILYEAEIFAPD 116 Query: 125 GYQKHFDNISSAYVRILQRARAAGATNAFSDEEFEAIVQVLMGARGYLSRRYSYSERGVT 184 + +HF + Y L RA G +SD+E EA++ +L+ AR YL+ RY + +G T Sbjct: 117 AHDEHFRILVDGYKGALGRAVERGEIKGYSDQELEAVIYMLLSARSYLAMRYVHDGKGGT 176 Query: 185 A-VPDYVITAYQKLVTRGLFTTS 206 +P +VI AY K VTRGLF Sbjct: 177 GPLPGHVIDAYVKFVTRGLFAAG 199 >ref|YP_004417795.1| transcriptional regulatory protein [Pusillimonas sp. T7-7] gb|AEC21171.1| transcriptional regulatory protein [Pusillimonas sp. T7-7] Length = 227 Score = 160 bits (404), Expect = 2e-37, Method: Compositional matrix adjust. Identities = 86/200 (43%), Positives = 127/200 (63%), Gaps = 12/200 (6%) Query: 14 RVERXR--YPGIFDAATKVVGKYGYAEASVARITEAAGVAQGTFYNHFENRQELLDQLLP 71 R ER R + +F AA+++VG+ GY + S++ IT+ AGVAQGTFYNHFE+RQ++LDQLLP Sbjct: 31 RSERGRLIHEALFTAASEIVGERGYEDTSISLITQRAGVAQGTFYNHFESRQDILDQLLP 90 Query: 72 KIGLDMVRFI--HARTGTASEARQEVERFSAFFDFIREVPEFLRILNEAEFFAPIGYQKH 129 +G +M+ ++ +R G+ R+E+ F F+ F++ P F R+LNEA FAP YQ H Sbjct: 91 SLGKEMLAYVGECSRPGSTILEREELG-FRGFYTFLKLHPYFFRVLNEAPSFAPKAYQAH 149 Query: 130 FDNISSAYVRILQRARAAGATNAFSDEEFEAIVQVLMGARGYLSRRYSYSERG----VTA 185 + + Y+R L+R +G F+++E EA V+MGAR YL Y+ R + Sbjct: 150 IELVRDGYMRFLKRGLDSGEIKGFNEQELEAAAFVMMGARLYLGH---YANRAGNNDGSD 206 Query: 186 VPDYVITAYQKLVTRGLFTT 205 +PD+V AY+KL+T GL T Sbjct: 207 IPDWVTQAYRKLITHGLTGT 226