BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0113.0012.p (468 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774651.1| hydrolase [Bradyrhizobium japonicum USDA 110] >... 716 0.0 ref|YP_004524030.1| lignin peroxidase LipJ [Mycobacterium sp. JD... 345 1e-92 ref|ZP_04751075.1| hydrolase, alpha/beta hydrolase fold family p... 334 2e-89 ref|YP_888750.1| hydrolase, alpha/beta hydrolase fold family pro... 328 2e-87 ref|YP_004139367.1| LuxR family transcription regulator [Mesorhi... 315 1e-83 >ref|NP_774651.1| hydrolase [Bradyrhizobium japonicum USDA 110] dbj|BAC53276.1| bll8011 [Bradyrhizobium japonicum USDA 110] Length = 445 Score = 716 bits (1849), Expect = 0.0, Method: Compositional matrix adjust. Identities = 341/444 (76%), Positives = 386/444 (86%) Query: 24 MTEVALPETQYAQSGDFNIAYQVMGDGPTDIILVPGIISHIDFQHELPGYTRFLRRLAKF 83 M E+ALPETQYAQSGDF+IAYQVMG GP DIILVPGIISHID+QHELPGYT+ LRR+A+F Sbjct: 1 MAELALPETQYAQSGDFSIAYQVMGSGPVDIILVPGIISHIDYQHELPGYTQILRRMARF 60 Query: 84 SRVVTFDKRGQGLSDRLADVPSLEERIDDVRTIMDAINSKRAALVGFSEGASMSVLFATT 143 SRVVTFDKRGQGLSDRLADVPSLE+RIDDVR +MDAI S+RA LVGFSEGASMSVLFATT Sbjct: 61 SRVVTFDKRGQGLSDRLADVPSLEDRIDDVRAVMDAIGSRRAVLVGFSEGASMSVLFATT 120 Query: 144 YPERVSHLVLFGGLARISDLLPPNLTPSEVQERLAYVVKSWGNGDFLKRVFASDAGNPEI 203 YP+RVSHLVLFGGLARI+DL PP+ +P+E ERLA +VK WG+G FL VFAS+A NP+ Sbjct: 121 YPDRVSHLVLFGGLARIADLFPPSFSPAEADERLANLVKRWGSGSFLANVFASEASNPDA 180 Query: 204 LARIAKFEKLGSSPGALKSYILSNRRIDINPILPVVRTPTLVLHRTTDAQVPVTLGRKLA 263 ARIAKFEKL SPGA++SYI+SNRRID+N ILP VR PTL+LHR TDAQVPV LGRK+A Sbjct: 181 AARIAKFEKLACSPGAIRSYIISNRRIDVNAILPCVRAPTLILHRATDAQVPVALGRKMA 240 Query: 264 AGIPGAKYIEYPSGDHAFWTGDIERVTGDIEEFITGQRASEGIDLERILATVLFTDIVGS 323 AGIPGAKYIEYPSGDHAFWTGD E + GDIEEF+TG R + DLERILATV+FTDIV S Sbjct: 241 AGIPGAKYIEYPSGDHAFWTGDTETLVGDIEEFVTGHRQAGDTDLERILATVMFTDIVDS 300 Query: 324 TNLALQLGDHRWRDLLDNHDDRSGRIVSKHRGTLVKSTGDGVLATFDGPGRAVRCALALS 383 T A ++GD RWR LD HD + + + +HRG LVK+TGDGVLATFDGPGRA+RCAL+ S Sbjct: 301 TRQAAEIGDQRWRGRLDEHDALARQFIDRHRGNLVKTTGDGVLATFDGPGRAIRCALSFS 360 Query: 384 EESKSIGLPVRAGLHCGEVEIRGNDIGGIAVHAAARVMSQSGSNEVFVSRVVTDLVAGTD 443 ++ IGLPVRAGLH GE+E+RG+DIGGIAVHAAARVMSQS +EV VSRVVTDLVAG Sbjct: 361 SAARQIGLPVRAGLHTGEIEMRGSDIGGIAVHAAARVMSQSAPDEVLVSRVVTDLVAGAG 420 Query: 444 LKFSERGSYELKGLPGKWDLFAAS 467 L+FSERGSYELKGLPGKWDLFAA+ Sbjct: 421 LRFSERGSYELKGLPGKWDLFAAT 444 >ref|YP_004524030.1| lignin peroxidase LipJ [Mycobacterium sp. JDM601] gb|AEF36776.1| lignin peroxidase LipJ [Mycobacterium sp. JDM601] Length = 514 Score = 345 bits (884), Expect = 1e-92, Method: Compositional matrix adjust. Identities = 186/464 (40%), Positives = 274/464 (59%), Gaps = 29/464 (6%) Query: 29 LPETQYAQSGDFNIAYQVMGDGPTDIILVPGIISHIDFQHELPGYTRFLRRLAKFSRVVT 88 +PET YA+ GD ++AYQ+ GDGP ++++V +SHI+ LP + F+ +L F RV Sbjct: 1 MPETSYAKCGDLSLAYQLFGDGPIELVVVGPFVSHIELAWTLPQFKAFMEQLGTFCRVAW 60 Query: 89 FDKRGQGLSDRLADVPSLEERIDDVRTIMDAINSKRAALVGFSEGASMSVLFATTYPERV 148 FDK G GLSD + V +LEER ++ +MDA+ ++A + G S+G ++++FA T+P R Sbjct: 61 FDKAGVGLSDPVPKVRTLEERATEIEAVMDAVGFEQAVVCGLSDGGPVAIMFAATWPTRT 120 Query: 149 SHLVLFGGLARIS-----DL--------------LPPNLTPS-----EVQERLAYVVKSW 184 L+L G +A S DL L + TPS Q+ V +W Sbjct: 121 RALILSGTVAYWSFEGWDDLDRDPAELRARFLTDLGEDYTPSVEQLARFQQAGRTVRSAW 180 Query: 185 GNGDFLKRVFASDAGNPEILARIAKFEKLGSSPGALKSYILSNRRIDINPILPVVRTPTL 244 G+G+ + A + L ++A E++ +SPG ++ + ID+ PILP + PTL Sbjct: 181 GSGE----TASISAPSVRSLRQLAMCERMSASPGMARASFEAAYLIDVRPILPTLTVPTL 236 Query: 245 VLHRTTDAQVPVTLGRKLAAGIPGAKYIEYPSGDHAFWTGDIERVTGDIEEFITGQRASE 304 V+H D VPV GR +A IPGA+Y+E DHA + + +++ ++EEF+TG A+ Sbjct: 237 VIHAREDHAVPVQGGRYIADHIPGARYLEVEGIDHAPFLTEPDKILTEVEEFLTGSHAAP 296 Query: 305 GIDLERILATVLFTDIVGSTNLALQLGDHRWRDLLDNHDDRSGRIVSKHRGTLVKSTGDG 364 R L TVLFTDIV ST A GD RWR +L + + + + G +VKSTGDG Sbjct: 297 A-QSHRALRTVLFTDIVASTQHAAVTGDERWRAVLQRFGEITAELTDRFSGAVVKSTGDG 355 Query: 365 VLATFDGPGRAVRCALALSEESKSIGLPVRAGLHCGEVEIRGNDIGGIAVHAAARVMSQS 424 LATFDGP +A+RCA AL ++ ++G+ +R G+H GE E+ NDI G+AVH AAR++ Q+ Sbjct: 356 HLATFDGPTQAIRCAEALQSDADTLGIEIRVGIHTGECELIDNDIAGMAVHIAARIVGQA 415 Query: 425 GSNEVFVSRVVTDLVAGTDLKFSERGSYELKGLPGKWDLFAASK 468 G E+ VSR V DLV G+ F +RGS EL+G+PG W L A ++ Sbjct: 416 GPGEILVSRTVRDLVVGSGTGFEDRGSVELRGVPGHWQLLAVNR 459 >ref|ZP_04751075.1| hydrolase, alpha/beta hydrolase fold family protein [Mycobacterium kansasii ATCC 12478] Length = 514 Score = 334 bits (857), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 183/464 (39%), Positives = 261/464 (56%), Gaps = 29/464 (6%) Query: 29 LPETQYAQSGDFNIAYQVMGDGPTDIILVPGIISHIDFQHELPGYTRFLRRLAKFSRVVT 88 + ET YA GD ++AYQV GDGP +++ SH++ +P + + +L F+R++ Sbjct: 1 MAETSYASCGDLSLAYQVFGDGPVELVWAGSFASHVELYWTMPEFGSLMEKLGTFARILL 60 Query: 89 FDKRGQGLSDRLADVPSLEERIDDVRTIMDAINSKRAALVGFSEGASMSVLFATTYPERV 148 FDK G GLSD + V +L+ER ++ +MDA +AAL+G SEG ++LFA T PER Sbjct: 61 FDKAGVGLSDPVPRVRTLDERAAEIEAVMDAAGFGKAALIGVSEGGPAAILFAATRPERT 120 Query: 149 SHLVLFGGL-------------------ARISDLLPPNLTPS-----EVQERLAYVVKSW 184 L+L G AR+ L + PS QE + +W Sbjct: 121 RALILTGTTSYSATQGWDDLECDPAELRARVVRELGEDYVPSLEWIARSQEFGRAIRSAW 180 Query: 185 GNGDFLKRVFASDAGNPEILARIAKFEKLGSSPGALKSYILSNRRIDINPILPVVRTPTL 244 G+G LK V +S + ++ E++ +SP ++ + RID+ PILP + PTL Sbjct: 181 GSGAALKCVISSI----RSMRQLGTLERMCASPAMARATAEAGFRIDVRPILPTITVPTL 236 Query: 245 VLHRTTDAQVPVTLGRKLAAGIPGAKYIEYPSGDHAFWTGDIERVTGDIEEFITGQRASE 304 VLH D VPV GR LA IPGA+ +E DHA W + +RV +IEE +TG + Sbjct: 237 VLHARDDPGVPVQSGRYLADHIPGARLVELEGADHAPWFTEPDRVATEIEELLTGSHTAP 296 Query: 305 GIDLERILATVLFTDIVGSTNLALQLGDHRWRDLLDNHDDRSGRIVSKHRGTLVKSTGDG 364 R L TVLFTDIV ST A +GD RWR +L + + + + GT+VKSTGDG Sbjct: 297 A-QSHRALRTVLFTDIVASTEHAAAMGDERWRAVLQRFGEITAELTERFGGTVVKSTGDG 355 Query: 365 VLATFDGPGRAVRCALALSEESKSIGLPVRAGLHCGEVEIRGNDIGGIAVHAAARVMSQS 424 L TFDGP +A+RCA AL ++++G+ +R G+H GE E+ DIGGIAVH AAR++ + Sbjct: 356 HLTTFDGPTQAIRCAEALRAGAETLGIEIRIGIHTGECELLDCDIGGIAVHIAARILGHA 415 Query: 425 GSNEVFVSRVVTDLVAGTDLKFSERGSYELKGLPGKWDLFAASK 468 + ++ VS V DLV G+ F +RGS EL+G+PG W L A + Sbjct: 416 EAGDILVSCTVRDLVVGSGTGFEDRGSVELRGVPGAWQLLAVER 459 >ref|YP_888750.1| hydrolase, alpha/beta hydrolase fold family protein [Mycobacterium smegmatis str. MC2 155] gb|ABK75261.1| hydrolase, alpha/beta hydrolase fold family protein [Mycobacterium smegmatis str. MC2 155] Length = 517 Score = 328 bits (840), Expect = 2e-87, Method: Compositional matrix adjust. Identities = 181/461 (39%), Positives = 261/461 (56%), Gaps = 29/461 (6%) Query: 29 LPETQYAQSGDFNIAYQVMGDGPTDIILVPGIISHIDFQHELPGYTRFLRRLAKFSRVVT 88 + ET YA GD ++AYQ+ GDGP ++ V + H++ +P + F +LA F RV Sbjct: 1 MAETSYASCGDLSLAYQLFGDGPIPLVFVGPFVGHVELFWTVPEFKSFFDQLASFCRVAI 60 Query: 89 FDKRGQGLSDRLADVPSLEERIDDVRTIMDAINSKRAALVGFSEGASMSVLFATTYPERV 148 FDK G GLSD + V +L++R ++ +MDA+ A ++ SEG S+LFA P RV Sbjct: 61 FDKAGTGLSDPVPKVRTLDDRAAEIEAVMDAVGFDDAVVLAMSEGGPASILFAANRPGRV 120 Query: 149 SHLVLFGGLA-----RISDL--------------LPPNLTPS-----EVQERLAYVVKSW 184 LV +G A R DL + P+ QE+ V W Sbjct: 121 RTLVAYGSFATMAGCRWEDLDGDPVDIRARSVAEMGDEYAPTVEQVIHFQEQARAVRGQW 180 Query: 185 GNGDFLKRVFASDAGNPEILARIAKFEKLGSSPGALKSYILSNRRIDINPILPVVRTPTL 244 G+G ++ S + ++ FE+L +SPG ++ + RID+ PILP + PTL Sbjct: 181 GSGAAVRCAMPSMGS----MRQLGMFERLCASPGMARATFEAAFRIDVRPILPTIAAPTL 236 Query: 245 VLHRTTDAQVPVTLGRKLAAGIPGAKYIEYPSGDHAFWTGDIERVTGDIEEFITGQRASE 304 V+H D VPV R LA I GA+++E DHA W + +RV +IEEF+TG A+ Sbjct: 237 VIHARDDPAVPVQCSRYLADHISGARWLEVDGVDHAPWFTEADRVLTEIEEFVTGNHAAP 296 Query: 305 GIDLERILATVLFTDIVGSTNLALQLGDHRWRDLLDNHDDRSGRIVSKHRGTLVKSTGDG 364 + R L TVLFTDIV ST A GD RWR +L + + + + G +VKSTGDG Sbjct: 297 H-NSHRALRTVLFTDIVASTQHAASNGDERWRAVLQRFGEVTEELSGRFGGVVVKSTGDG 355 Query: 365 VLATFDGPGRAVRCALALSEESKSIGLPVRAGLHCGEVEIRGNDIGGIAVHAAARVMSQS 424 L+TF+GP A+R A AL +++++G+ +RA +H GE E+ G+DIGGIAVH AAR++ Q+ Sbjct: 356 HLSTFEGPTHAIRYAEALRSDAETLGIQIRAAIHTGECELLGDDIGGIAVHIAARILGQA 415 Query: 425 GSNEVFVSRVVTDLVAGTDLKFSERGSYELKGLPGKWDLFA 465 + E+ VSR V DLV G+ F++RG+ EL+G+PG W L A Sbjct: 416 RAGEILVSRTVRDLVVGSGTSFADRGNVELRGVPGTWQLLA 456 >ref|YP_004139367.1| LuxR family transcription regulator [Mesorhizobium ciceri biovar biserrulae WSM1271] gb|ADV09317.1| regulatory protein LuxR [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 517 Score = 315 bits (807), Expect = 1e-83, Method: Compositional matrix adjust. Identities = 180/422 (42%), Positives = 251/422 (59%), Gaps = 12/422 (2%) Query: 31 ETQYAQSGDFNIAYQVMGDGPTDIILVPGIISHIDFQHELPGYTRFLRRLAKFSRVVTFD 90 ET+YA SGD IAYQV+G G D++ VPG IS++D E GYTR L+RL+ FSR++ FD Sbjct: 5 ETRYACSGDVRIAYQVVGQGSFDLVFVPGFISNLDLHWEDEGYTRLLKRLSAFSRLILFD 64 Query: 91 KRGQGLSDRL--ADVPSLEERIDDVRTIMDAINSKRAALVGFSEGASMSVLFATTYPERV 148 KRG GLSDR+ ++PSLE R+DDVR +MDA S RAAL+G SEGA M++LFA TYPER Sbjct: 65 KRGTGLSDRVDAHNLPSLETRMDDVRAVMDAAGSGRAALLGSSEGAPMAMLFAATYPERT 124 Query: 149 SHLVLFGGLARISDLLPPNLTPSEVQERLAYVVKSWGNGDFLKRVFASDAGNPEILARIA 208 L L+GG A + ++P + + +WG G L S + A Sbjct: 125 RALALYGGYAHFQKWV---MSPERLDAFIEMAETAWGTGATLPHFAPSRVDDAHFAQWWA 181 Query: 209 KFEKLGSSPGALKSYILSNRRIDINPILPVVRTPTLVLHRTTDAQVPVTLGRKLAAGIPG 268 +FE+L +SP A + N +DI IL V+ PTLV+HR DA+V R LA IPG Sbjct: 182 RFERLSASPTAAAALARMNADVDIRHILSVISAPTLVIHRRNDARVDPDASRFLAQKIPG 241 Query: 269 AKYIEYPSGDHAFWTGDIERVTGDIEEFITGQRASEGIDLERILATVLFTDIVGSTNLAL 328 A+ +E P DH WTGD++ V IEEF+TG+RA +D R+LA +L T I + Sbjct: 242 ARLVEIPGRDHPIWTGDVDGVADLIEEFLTGERAVGEVD--RVLAALLVTRIYDTA---- 295 Query: 329 QLGDHRWRDLLDNHDDRSGRIVSKHRGTLVKSTGDGVLATFDGPGRAVRCALALSEESKS 388 +LGD W + + +V +H G V G+ +++ FDGP RA+RCA AL E ++ Sbjct: 296 RLGDRMWSERSQRFQETWRLLVGRHGGRSVGLHGELMISRFDGPARAIRCAAALREAAQE 355 Query: 389 IGLPVRAGLHCGEVEIRGNDIGGIAVHAAARVMSQSGSNEVFVSRVVTDLVAGTDLKFSE 448 IG+ G H GE+E+RG +G A A ++ + +G ++ SR++ DL AG+ L F++ Sbjct: 356 IGVASAQGAHVGEIEVRGPPVGTTA-RVAIQLAAHAGRGDIIASRLIADLAAGSGLHFTD 414 Query: 449 RG 450 G Sbjct: 415 AG 416