BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0113.0008.p (340 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_436165.2| hypothetical protein SMa1676 [Sinorhizobium mel... 373 e-101 ref|YP_004676869.1| hypothetical protein HYPMC_3086 [Hyphomicrob... 355 9e-96 ref|YP_001313943.1| hypothetical protein Smed_5234 [Sinorhizobiu... 335 6e-90 ref|YP_001416134.1| hypothetical protein Xaut_1228 [Xanthobacter... 324 1e-86 ref|ZP_04679978.1| Hypothetical protein OINT_1000858 [Ochrobactr... 318 8e-85 >ref|NP_436165.2| hypothetical protein SMa1676 [Sinorhizobium meliloti 1021] ref|YP_004551739.1| hypothetical protein Sinme_6109 [Sinorhizobium meliloti AK83] gb|AAK65577.2| conserved hypothetical protein [Sinorhizobium meliloti 1021] gb|AEG07710.1| protein of unknown function UPF0118 [Sinorhizobium meliloti BL225C] gb|AEG57616.1| protein of unknown function UPF0118 [Sinorhizobium meliloti AK83] gb|AEH81806.1| conserved hypothetical protein [Sinorhizobium meliloti SM11] Length = 352 Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust. Identities = 182/318 (57%), Positives = 236/318 (74%) Query: 23 VLAPLAAALFIIAIVWPVQQRLQSWLPKLLALAITVVVTVATCIAFASLAAWGFGRVGRS 82 + AP+A ALFIIA+VWP Q RLQ+ LP+ LAL I+ ++ V +AF L AW FG VGR Sbjct: 31 IFAPVAFALFIIALVWPTQCRLQAMLPRYLALIISFLLVVLAIVAFGGLIAWAFGHVGRW 90 Query: 83 LIADAARYQAFYDAAVIWLDGHGVSFAGVWAEHFNVGWLLRTTQYVTGRVNTTLSFWLIA 142 +IADAAR+Q YD +WL+ HGV+ +W+E+F VGW+L T Q V+GR+N+T SFWLIA Sbjct: 91 IIADAARFQQLYDQVRLWLEEHGVAVGVLWSENFGVGWVLHTVQAVSGRLNSTFSFWLIA 150 Query: 143 LVYVVLGLLEVEDAGQRIQRLENRTAARVLLKGSKATAAKFRKYMLVRTQMSAVTGLLVG 202 LVYV+LGL+E++D G+RI+ L NRTA+ +LL+GS+ TA K R+YM++RT MS VTGLLV Sbjct: 151 LVYVLLGLMEMDDFGRRIEALRNRTASALLLRGSQQTAMKIRRYMMIRTVMSVVTGLLVW 210 Query: 203 LFAAVTGLPFAFEWGVIAFVLNYVPFVGPFIATLFPTLLAMTQFESWPAVFGVFACLNVI 262 +F GL A EWG IAF LNY+PF+GP +ATLFPTL A+ QF + V VF LN+I Sbjct: 211 IFTRAVGLSLAEEWGFIAFALNYIPFLGPLLATLFPTLFALIQFGTVETVLIVFTGLNLI 270 Query: 263 QFVVGSYIEPRVAGSTLSISPFLVLFAIFFWSSLWGLFGTFIGVPITLAILTFCAESPSA 322 QFVV SYIEPR +GS LS+SP +VLF++F W LWG+FG FIGVPIT+A+LTFC + PS+ Sbjct: 271 QFVVSSYIEPRASGSALSMSPVMVLFSVFLWGYLWGIFGAFIGVPITIALLTFCNQHPSS 330 Query: 323 AWIADLCGGSHEDKPAAS 340 W+++L G AS Sbjct: 331 KWLSELFGLEMAADQVAS 348 >ref|YP_004676869.1| hypothetical protein HYPMC_3086 [Hyphomicrobium sp. MC1] emb|CCB66303.1| conserved membrane protein of unknown function [Hyphomicrobium sp. MC1] Length = 338 Score = 355 bits (910), Expect = 9e-96, Method: Compositional matrix adjust. Identities = 186/332 (56%), Positives = 236/332 (71%) Query: 6 GIIAAVLVIAAVAQARSVLAPLAAALFIIAIVWPVQQRLQSWLPKLLALAITVVVTVATC 65 G+ AA+L AA+ A ++ APLA ALFIIAI WP+Q+ LQ+ + +L+A+AIT + Sbjct: 3 GVCAAILSCAALYVAETIFAPLAFALFIIAITWPLQRFLQARMARLVAVAITTAAIIIVI 62 Query: 66 IAFASLAAWGFGRVGRSLIADAARYQAFYDAAVIWLDGHGVSFAGVWAEHFNVGWLLRTT 125 +AFA L AW GRVG+ ++ DAAR QA Y + WL+GHGV AG+WA +F LLR Sbjct: 63 VAFAMLLAWAAGRVGQFIVNDAARLQALYGSLTSWLEGHGVELAGLWASYFRGDQLLRLA 122 Query: 126 QYVTGRVNTTLSFWLIALVYVVLGLLEVEDAGQRIQRLENRTAARVLLKGSKATAAKFRK 185 Q VT R+NT LSF ++ +YV+LGLLEV+DA R+ + VLL G A K R+ Sbjct: 123 QEVTTRLNTALSFLIVVFIYVLLGLLEVDDACARLHAWRQGSLGTVLLTGGANAATKLRR 182 Query: 186 YMLVRTQMSAVTGLLVGLFAAVTGLPFAFEWGVIAFVLNYVPFVGPFIATLFPTLLAMTQ 245 YMLVRTQMSA+TGLLV +FA + GLP A EWGVIAF LN++PF+GPFIAT+FPT+ A+ Q Sbjct: 183 YMLVRTQMSAITGLLVWVFAWLAGLPLALEWGVIAFALNFIPFIGPFIATMFPTVFAVAQ 242 Query: 246 FESWPAVFGVFACLNVIQFVVGSYIEPRVAGSTLSISPFLVLFAIFFWSSLWGLFGTFIG 305 F SWPA +FACLNVIQFVVGSY+EPR G+ LSISPF+VLF++FFW+ LWGL G FIG Sbjct: 243 FASWPAAVAIFACLNVIQFVVGSYLEPRFVGNALSISPFIVLFSVFFWTFLWGLPGAFIG 302 Query: 306 VPITLAILTFCAESPSAAWIADLCGGSHEDKP 337 VPI + +L+ C S WIADL G S +P Sbjct: 303 VPIVIVLLSLCEVHSSTHWIADLFGASPLREP 334 >ref|YP_001313943.1| hypothetical protein Smed_5234 [Sinorhizobium medicae WSM419] gb|ABR64010.1| protein of unknown function UPF0118 [Sinorhizobium medicae WSM419] Length = 362 Score = 335 bits (860), Expect = 6e-90, Method: Compositional matrix adjust. Identities = 166/328 (50%), Positives = 231/328 (70%), Gaps = 1/328 (0%) Query: 3 ITTGIIAAVLVIAAVAQARSVLAPLAAALFIIAIVWPVQQRLQSWLPKLLALAITVVVTV 62 + GI+ + +AAV + VLAP+A ALFIIA++WP+Q RL++ L ++ ALAI + Sbjct: 28 VVPGILTVIATVAAVYFSGVVLAPVACALFIIAVLWPIQSRLEARLHRVFALAIVAALLF 87 Query: 63 ATCIAFASLAAWGFGRVGRSLIADAARYQAFYDAAVIWLDGHGVSFAGVWAEHFNVGWLL 122 T + F S+ FGR+GRSL DA ++Q Y+ WL GHG++ AG WA++ + LL Sbjct: 88 GTFVVFMSVVTLSFGRIGRSLAMDAGQFQLLYNRLAEWLGGHGIALAGFWADNLDSRLLL 147 Query: 123 RTTQYVTGRVNTTLSFWLIALVYVVLGLLEVEDAGQRIQRLENRTAARVLLKGSKATAAK 182 R Q ++ R+NT +SFWL+ L+YV+LGLLEV D G RI+RL + AAR++ G + A++ Sbjct: 148 RALQGISARLNTMVSFWLVVLLYVILGLLEVSDLGARIRRLTDDNAARII-SGFELAASR 206 Query: 183 FRKYMLVRTQMSAVTGLLVGLFAAVTGLPFAFEWGVIAFVLNYVPFVGPFIATLFPTLLA 242 R+Y+L+RT MSA TG+ V A GL FA EWG++AF LNY+PF+GP AT+ PT A Sbjct: 207 IRRYLLIRTIMSAATGIAVWALATAFGLRFAAEWGIVAFTLNYIPFIGPAFATILPTCYA 266 Query: 243 MTQFESWPAVFGVFACLNVIQFVVGSYIEPRVAGSTLSISPFLVLFAIFFWSSLWGLFGT 302 + QF+S + VFACL+ QF++GSYIEPRVAG+TL ISP LVLF++F W+ LWG+FG Sbjct: 267 LAQFQSPQSALIVFACLSTAQFIIGSYIEPRVAGNTLGISPSLVLFSVFLWTFLWGIFGA 326 Query: 303 FIGVPITLAILTFCAESPSAAWIADLCG 330 FIGVPIT+A+L+FCA+ S W+A+L G Sbjct: 327 FIGVPITIAVLSFCAQFASTRWLAELLG 354 >ref|YP_001416134.1| hypothetical protein Xaut_1228 [Xanthobacter autotrophicus Py2] gb|ABS66477.1| protein of unknown function UPF0118 [Xanthobacter autotrophicus Py2] Length = 338 Score = 324 bits (830), Expect = 1e-86, Method: Compositional matrix adjust. Identities = 166/332 (50%), Positives = 223/332 (67%) Query: 1 LKITTGIIAAVLVIAAVAQARSVLAPLAAALFIIAIVWPVQQRLQSWLPKLLALAITVVV 60 +K G+ AA+LV AA+ A +++ P+A A+F+IA+V+P+Q L+ LPKLLA+ T+V+ Sbjct: 1 MKFPVGLAAAILVFAALYVADTLIVPVAFAVFVIAVVYPLQSVLEKRLPKLLAVLATLVI 60 Query: 61 TVATCIAFASLAAWGFGRVGRSLIADAARYQAFYDAAVIWLDGHGVSFAGVWAEHFNVGW 120 T+A +S+ WGF V + + AR+Q Y A WL+GHG AG+WAEHF+V W Sbjct: 61 TLAVVGGVSSVVVWGFSHVATWVFQNTARFQVLYGQAATWLEGHGFVLAGLWAEHFDVRW 120 Query: 121 LLRTTQYVTGRVNTTLSFWLIALVYVVLGLLEVEDAGQRIQRLENRTAARVLLKGSKATA 180 LLR Q ++GR+ SF + VYV+LGLLEV+ A ++ RL A L TA Sbjct: 121 LLRVFQDISGRLQGLASFLVFTFVYVLLGLLEVDAAKSQVLRLGRTGRAPHLPAALADTA 180 Query: 181 AKFRKYMLVRTQMSAVTGLLVGLFAAVTGLPFAFEWGVIAFVLNYVPFVGPFIATLFPTL 240 AK +KYM VRT MS TG +V +F GL A WG IAF +NY+PF+GPF+ATL P L Sbjct: 181 AKLQKYMAVRTLMSIATGAVVWVFTLTAGLELAIAWGAIAFAMNYIPFIGPFVATLLPAL 240 Query: 241 LAMTQFESWPAVFGVFACLNVIQFVVGSYIEPRVAGSTLSISPFLVLFAIFFWSSLWGLF 300 A+ QFESW VFACLNVIQF+ GSY+EPR+AG L++SPFLVLF++FFW+ LWG+ Sbjct: 241 FALAQFESWEMALFVFACLNVIQFLSGSYLEPRLAGKALAVSPFLVLFSVFFWAFLWGIA 300 Query: 301 GTFIGVPITLAILTFCAESPSAAWIADLCGGS 332 G FIGVPI +A+LT CA PS+ ++A+L G Sbjct: 301 GAFIGVPILIAVLTICAHHPSSRYVAELFSGQ 332 >ref|ZP_04679978.1| Hypothetical protein OINT_1000858 [Ochrobactrum intermedium LMG 3301] gb|EEQ95484.1| Hypothetical protein OINT_1000858 [Ochrobactrum intermedium LMG 3301] Length = 340 Score = 318 bits (815), Expect = 8e-85, Method: Compositional matrix adjust. Identities = 157/329 (47%), Positives = 222/329 (67%) Query: 7 IIAAVLVIAAVAQARSVLAPLAAALFIIAIVWPVQQRLQSWLPKLLALAITVVVTVATCI 66 +IA ++IA + +V AP+ ALFII +VWP+Q+ L +P+ +ALAIT ++ V + Sbjct: 11 LIAGCVLIAMLHYGSAVFAPVVFALFIIMLVWPIQRALSLIMPRYVALAITFLLVVCLLL 70 Query: 67 AFASLAAWGFGRVGRSLIADAARYQAFYDAAVIWLDGHGVSFAGVWAEHFNVGWLLRTTQ 126 F L AW G+VGR ++ DA RYQ Y+ WLDGHG++ + + +E+F+V W LRT Q Sbjct: 71 GFGWLIAWTVGQVGRRIVIDAVRYQLLYEQLRTWLDGHGIAASVLLSENFSVSWTLRTLQ 130 Query: 127 YVTGRVNTTLSFWLIALVYVVLGLLEVEDAGQRIQRLENRTAARVLLKGSKATAAKFRKY 186 + R+N T SFW++ALVYV+LGL E E+ G RI++L+++ AA L+ S++ AAK R Y Sbjct: 131 TIGSRLNNTFSFWIVALVYVLLGLAETEEFGARIRQLKDQAAATAFLRASRSAAAKIRFY 190 Query: 187 MLVRTQMSAVTGLLVGLFAAVTGLPFAFEWGVIAFVLNYVPFVGPFIATLFPTLLAMTQF 246 M++R MS TG V L + GLPFA WG +AF+LN++PF+GP +ATL T A T F Sbjct: 191 MVLRALMSIATGSFVWLLTWLVGLPFAETWGFVAFILNFIPFLGPLVATLLITAFAFTHF 250 Query: 247 ESWPAVFGVFACLNVIQFVVGSYIEPRVAGSTLSISPFLVLFAIFFWSSLWGLFGTFIGV 306 +W VF LN++Q V+GS IEPR+ G T+S+SPF LF++F W SLWG+FG FIGV Sbjct: 251 ANWQMALMVFIGLNIVQSVIGSVIEPRLTGKTISLSPFATLFSVFAWGSLWGVFGAFIGV 310 Query: 307 PITLAILTFCAESPSAAWIADLCGGSHED 335 PIT+ LTFCA+ + +W A++ G S E Sbjct: 311 PITIVALTFCAQYSATSWFAEIFGFSREQ 339