BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0112.0019.p         (88 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_766689.1| hypothetical protein bsl0049 [Bradyrhizobium ja...   177   4e-43
ref|YP_002277147.1| hypothetical protein Gdia_2800 [Gluconacetob...   127   4e-28
ref|ZP_06888614.1| conserved hypothetical protein [Methylosinus ...   122   2e-26
gb|EGP54466.1| hypothetical protein Agau_L300016 [Agrobacterium ...   121   4e-26
ref|ZP_07026222.1| conserved hypothetical protein [Afipia sp. 1N...   119   2e-25

>ref|NP_766689.1| hypothetical protein bsl0049 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC45314.1| bsl0049 [Bradyrhizobium japonicum USDA 110]
          Length = 88

 Score =  177 bits (449), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 88/88 (100%), Positives = 88/88 (100%)

Query: 1  MSDRSIKRGFASRPGDAESWIKASDTPPRSVNDAAAFTARLTIDVTPTLRGRIKVAAFQR 60
          MSDRSIKRGFASRPGDAESWIKASDTPPRSVNDAAAFTARLTIDVTPTLRGRIKVAAFQR
Sbjct: 1  MSDRSIKRGFASRPGDAESWIKASDTPPRSVNDAAAFTARLTIDVTPTLRGRIKVAAFQR 60

Query: 61 GVTVADMLRELLAREFPADAPENRHERQ 88
          GVTVADMLRELLAREFPADAPENRHERQ
Sbjct: 61 GVTVADMLRELLAREFPADAPENRHERQ 88


>ref|YP_002277147.1| hypothetical protein Gdia_2800 [Gluconacetobacter diazotrophicus
          PAl 5]
 gb|ACI52532.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
          PAl 5]
          Length = 84

 Score =  127 bits (320), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 64/82 (78%), Positives = 71/82 (86%)

Query: 1  MSDRSIKRGFASRPGDAESWIKASDTPPRSVNDAAAFTARLTIDVTPTLRGRIKVAAFQR 60
          MS+RS KRGFA+RPGDAE WIKA + P R  +DAAAFTARLTIDVTP LRGRIKVAAF+R
Sbjct: 1  MSERSTKRGFAARPGDAEGWIKAPEVPARRTDDAAAFTARLTIDVTPALRGRIKVAAFRR 60

Query: 61 GVTVADMLRELLAREFPADAPE 82
          G+TVADMLR LLAREFP D+ E
Sbjct: 61 GITVADMLRGLLAREFPDDSGE 82


>ref|ZP_06888614.1| conserved hypothetical protein [Methylosinus trichosporium OB3b]
 gb|EFH02882.1| conserved hypothetical protein [Methylosinus trichosporium OB3b]
          Length = 84

 Score =  122 bits (305), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 60/83 (72%), Positives = 69/83 (83%)

Query: 1  MSDRSIKRGFASRPGDAESWIKASDTPPRSVNDAAAFTARLTIDVTPTLRGRIKVAAFQR 60
          M++R  KRGF +RPGDAE WI+++D P R  NDA+ FTARLTIDVTP LRGRIKVAAF+R
Sbjct: 1  MNERPAKRGFTARPGDAEGWIRSADAPARRPNDASGFTARLTIDVTPALRGRIKVAAFRR 60

Query: 61 GVTVADMLRELLAREFPADAPEN 83
          GVTVADMLR+LLAREFP D  E 
Sbjct: 61 GVTVADMLRDLLAREFPDDPGET 83


>gb|EGP54466.1| hypothetical protein Agau_L300016 [Agrobacterium tumefaciens F2]
          Length = 84

 Score =  121 bits (303), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 59/77 (76%), Positives = 66/77 (85%)

Query: 1  MSDRSIKRGFASRPGDAESWIKASDTPPRSVNDAAAFTARLTIDVTPTLRGRIKVAAFQR 60
          M+ R+ KRGFASRPGDAE WIKA +TPP    DAAAFTARLTID+TP LRGRIK+AAF+R
Sbjct: 1  MTVRTEKRGFASRPGDAEGWIKAGETPPARSGDAAAFTARLTIDITPELRGRIKIAAFRR 60

Query: 61 GVTVADMLRELLAREFP 77
          GVT +DMLRELL REFP
Sbjct: 61 GVTASDMLRELLEREFP 77


>ref|ZP_07026222.1| conserved hypothetical protein [Afipia sp. 1NLS2]
 gb|EFI53364.1| conserved hypothetical protein [Afipia sp. 1NLS2]
          Length = 84

 Score =  119 bits (297), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 60/83 (72%), Positives = 68/83 (81%)

Query: 1  MSDRSIKRGFASRPGDAESWIKASDTPPRSVNDAAAFTARLTIDVTPTLRGRIKVAAFQR 60
          MS    +RGFA+RPGDAESWIKA D   R  ++ +AFTARLTIDVTP LRGRIKVAAFQR
Sbjct: 1  MSAGGARRGFAARPGDAESWIKAPDASSRRGDEPSAFTARLTIDVTPALRGRIKVAAFQR 60

Query: 61 GVTVADMLRELLAREFPADAPEN 83
          G+TVADMLR+L AREFPAD  E+
Sbjct: 61 GITVADMLRDLFAREFPADPGES 83