BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0112.0011.p         (49 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002130572.1| PREDICTED: similar to Tetratricopeptide repe...    34   6.9  

>ref|XP_002130572.1| PREDICTED: similar to Tetratricopeptide repeat protein 35 (TPR
          repeat protein 35) [Ciona intestinalis]
          Length = 293

 Score = 34.3 bits (77), Expect = 6.9,   Method: Compositional matrix adjust.
 Identities = 15/41 (36%), Positives = 24/41 (58%)

Query: 7  VRNYQLATVRVRALEERLPKSFAVDGTKSIEARRRGLQDQS 47
          + NY LA V +  L +R PKSF V   +++E   +G  D++
Sbjct: 59 IGNYDLANVCIEKLSDRFPKSFRVQKLRAMELEAKGQFDEA 99