BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0112.0010.p         (69 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_07026227.1| conserved hypothetical protein [Afipia sp. 1N...   115   2e-24
ref|YP_002277142.1| hypothetical protein Gdia_2795 [Gluconacetob...    89   2e-16
ref|ZP_06888619.1| conserved hypothetical protein [Methylosinus ...    82   2e-14
ref|ZP_06888450.1| conserved hypothetical protein [Methylosinus ...    80   9e-14
ref|ZP_08316002.1| hypothetical protein SXCC_01959 [Gluconacetob...    70   8e-11

>ref|ZP_07026227.1| conserved hypothetical protein [Afipia sp. 1NLS2]
 gb|EFI53369.1| conserved hypothetical protein [Afipia sp. 1NLS2]
          Length = 74

 Score =  115 bits (288), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 57/69 (82%), Positives = 59/69 (85%)

Query: 1  MPTEYWRSPETIERLNRLERPGFALEFLRRNADYRRDFAHTQRQIARDGVDAETARATFA 60
          MPTEYWRSPETI+RLNRLERPGFA+EFLRRN DYRRDF  TQRQI R  VDAETAR   A
Sbjct: 6  MPTEYWRSPETIDRLNRLERPGFAVEFLRRNHDYRRDFVRTQRQITRASVDAETARVGLA 65

Query: 61 RRWRLRFRP 69
          RRW LRFRP
Sbjct: 66 RRWGLRFRP 74


>ref|YP_002277142.1| hypothetical protein Gdia_2795 [Gluconacetobacter diazotrophicus
          PAl 5]
 gb|ACI52527.1| conserved hypothetical protein [Gluconacetobacter diazotrophicus
          PAl 5]
          Length = 71

 Score = 89.4 bits (220), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 44/67 (65%), Positives = 51/67 (76%)

Query: 1  MPTEYWRSPETIERLNRLERPGFALEFLRRNADYRRDFAHTQRQIARDGVDAETARATFA 60
          MP   WRSPETIE+LNRL+RPGFA E LRRN+ YRRD+A T R+I R  VD + AR+  A
Sbjct: 1  MPISDWRSPETIEQLNRLDRPGFAAELLRRNSAYRRDYARTLRRIERGAVDPDQARSNLA 60

Query: 61 RRWRLRF 67
          RRW LRF
Sbjct: 61 RRWGLRF 67


>ref|ZP_06888619.1| conserved hypothetical protein [Methylosinus trichosporium OB3b]
 gb|EFH02887.1| conserved hypothetical protein [Methylosinus trichosporium OB3b]
          Length = 69

 Score = 82.4 bits (202), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/68 (55%), Positives = 52/68 (76%)

Query: 1  MPTEYWRSPETIERLNRLERPGFALEFLRRNADYRRDFAHTQRQIARDGVDAETARATFA 60
          MPT +W+SP+++++LN L+R GFALEFLRRN +YR+D   T R+I R  VD  TA ++ A
Sbjct: 1  MPTNFWKSPDSVKQLNDLDRSGFALEFLRRNPEYRQDHRETLRRIERGAVDEATALSSLA 60

Query: 61 RRWRLRFR 68
          RRW L+FR
Sbjct: 61 RRWGLQFR 68


>ref|ZP_06888450.1| conserved hypothetical protein [Methylosinus trichosporium OB3b]
 gb|EFH03087.1| conserved hypothetical protein [Methylosinus trichosporium OB3b]
          Length = 69

 Score = 80.1 bits (196), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 38/68 (55%), Positives = 51/68 (75%)

Query: 1  MPTEYWRSPETIERLNRLERPGFALEFLRRNADYRRDFAHTQRQIARDGVDAETARATFA 60
          MPT +W+SP++I++LN L+  GFALEFLRRN  YR+D+  T R+I R  VD  TA ++ A
Sbjct: 1  MPTSFWKSPDSIKQLNDLDPSGFALEFLRRNPRYRQDYRETLRRIERGAVDEATALSSLA 60

Query: 61 RRWRLRFR 68
          RRW L+FR
Sbjct: 61 RRWGLQFR 68


>ref|ZP_08316002.1| hypothetical protein SXCC_01959 [Gluconacetobacter sp. SXCC-1]
 gb|EGG77569.1| hypothetical protein SXCC_01959 [Gluconacetobacter sp. SXCC-1]
          Length = 72

 Score = 70.5 bits (171), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 38/69 (55%), Positives = 49/69 (71%)

Query: 1  MPTEYWRSPETIERLNRLERPGFALEFLRRNADYRRDFAHTQRQIARDGVDAETARATFA 60
          MPT +WRSPE  + ++RL+R GFA+EFLRRN  YRRD+A  QR++ R GVD+    A FA
Sbjct: 1  MPTSFWRSPELRDHISRLDRSGFAVEFLRRNPTYRRDYARLQRRLGRRGVDSAAECAAFA 60

Query: 61 RRWRLRFRP 69
          + W L F P
Sbjct: 61 QCWGLCFCP 69