BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0112.0006.p         (57 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_766697.1| hypothetical protein bll0057 [Bradyrhizobium ja...   118   3e-25
ref|NP_768590.1| hypothetical protein blr1950 [Bradyrhizobium ja...   117   5e-25
ref|NP_109572.1| hypothetical protein mlr9738 [Mesorhizobium lot...   112   2e-23
ref|YP_001243472.1| hypothetical protein BBta_7724 [Bradyrhizobi...   112   2e-23
ref|YP_004611332.1| hypothetical protein Mesop_2779 [Mesorhizobi...   112   2e-23

>ref|NP_766697.1| hypothetical protein bll0057 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC45322.1| bll0057 [Bradyrhizobium japonicum USDA 110]
          Length = 120

 Score =  118 bits (296), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 56/57 (98%), Positives = 57/57 (100%)

Query: 1   VEIGAAWSKRSNEGRDYLGLKLDDPSFTAPIFANLFADEEGEGFSLIWSRPSRRNGD 57
           VEIGAAWSKRSNEGRDYLGLKLDDPSFTAPIFANLFADEEGEGFSLIWSRP+RRNGD
Sbjct: 64  VEIGAAWSKRSNEGRDYLGLKLDDPSFTAPIFANLFADEEGEGFSLIWSRPNRRNGD 120


>ref|NP_768590.1| hypothetical protein blr1950 [Bradyrhizobium japonicum USDA 110]
 gb|AAG60926.1|AF322013_45 ID539 [Bradyrhizobium japonicum]
 dbj|BAC47215.1| blr1950 [Bradyrhizobium japonicum USDA 110]
          Length = 108

 Score =  117 bits (294), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 56/57 (98%), Positives = 57/57 (100%)

Query: 1   VEIGAAWSKRSNEGRDYLGLKLDDPSFTAPIFANLFADEEGEGFSLIWSRPSRRNGD 57
           VEIGAAWSKRSNEGRDYLGLKLDDPSFTAPIFANLFADEEGEGFSLIWSRP+RRNGD
Sbjct: 52  VEIGAAWSKRSNEGRDYLGLKLDDPSFTAPIFANLFADEEGEGFSLIWSRPNRRNGD 108


>ref|NP_109572.1| hypothetical protein mlr9738 [Mesorhizobium loti MAFF303099]
 dbj|BAB54911.1| mlr9738 [Mesorhizobium loti MAFF303099]
          Length = 121

 Score =  112 bits (280), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 52/56 (92%), Positives = 55/56 (98%)

Query: 2   EIGAAWSKRSNEGRDYLGLKLDDPSFTAPIFANLFADEEGEGFSLIWSRPSRRNGD 57
           EIGAAWSKRSNEGRDYLGLKLDDPSFTAPI+ANLFADEEGEG SLIWSRP+RRNG+
Sbjct: 66  EIGAAWSKRSNEGRDYLGLKLDDPSFTAPIYANLFADEEGEGHSLIWSRPNRRNGE 121


>ref|YP_001243472.1| hypothetical protein BBta_7724 [Bradyrhizobium sp. BTAi1]
 gb|ABQ39566.1| hypothetical protein BBta_7724 [Bradyrhizobium sp. BTAi1]
          Length = 169

 Score =  112 bits (279), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 51/57 (89%), Positives = 56/57 (98%)

Query: 1   VEIGAAWSKRSNEGRDYLGLKLDDPSFTAPIFANLFADEEGEGFSLIWSRPSRRNGD 57
           VEIGAAW+KRSNEGRDYLGLKLDDPSFTAPI+ANLF DEEGEG+SLIWSRP+RRNG+
Sbjct: 113 VEIGAAWTKRSNEGRDYLGLKLDDPSFTAPIYANLFDDEEGEGYSLIWSRPNRRNGE 169


>ref|YP_004611332.1| hypothetical protein Mesop_2779 [Mesorhizobium opportunistum
           WSM2075]
 gb|AEH87238.1| protein of unknown function DUF736 [Mesorhizobium opportunistum
           WSM2075]
          Length = 108

 Score =  112 bits (279), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 52/56 (92%), Positives = 55/56 (98%)

Query: 2   EIGAAWSKRSNEGRDYLGLKLDDPSFTAPIFANLFADEEGEGFSLIWSRPSRRNGD 57
           EIGAAWSKRSNEGRDYLGLKLDDPSFTAPI+ANLFADEEGEG SLIWSRP+RRNG+
Sbjct: 53  EIGAAWSKRSNEGRDYLGLKLDDPSFTAPIYANLFADEEGEGHSLIWSRPNRRNGE 108