BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0111.0005.p         (126 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_769202.1| GDP-mannose mannosyl hydrolase [Bradyrhizobium ...   198   2e-49
ref|YP_579144.1| NUDIX hydrolase [Nitrobacter hamburgensis X14] ...   178   3e-43
ref|YP_319305.1| NUDIX hydrolase [Nitrobacter winogradskyi Nb-25...   176   1e-42
ref|YP_568382.1| NUDIX hydrolase [Rhodopseudomonas palustris Bis...   171   4e-41
ref|ZP_01045347.1| NUDIX hydrolase [Nitrobacter sp. Nb-311A] >gi...   171   4e-41

>ref|NP_769202.1| GDP-mannose mannosyl hydrolase [Bradyrhizobium japonicum USDA 110]
 dbj|BAC47827.1| GDP-mannose mannosyl hydrolase [Bradyrhizobium japonicum USDA 110]
          Length = 144

 Score =  198 bits (503), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 95/129 (73%), Positives = 110/129 (85%), Gaps = 3/129 (2%)

Query: 1   VSGVIFRDGKVLLVRRARSPGKGFYSLPGGRVEFGETLHTALHREIDEETGLKVEILGLA 60
           VS  IFRDGKVLL RRARSP KGFYSLPGGRVEFGE+LH AL RE+DEETGL +EI+GLA
Sbjct: 14  VSAAIFRDGKVLLTRRARSPAKGFYSLPGGRVEFGESLHQALVREVDEETGLAIEIIGLA 73

Query: 61  GWREVLPAGPGGGHYLIMTFAARWASREPHLNDEHDDFKWLAPE---EIGDLKVTGGLHE 117
           GWREVLPA  G GHYLIM+FAARWA+REP LNDE DD++W+AP+    +GD+K+TGGL E
Sbjct: 74  GWREVLPATAGAGHYLIMSFAARWAAREPVLNDELDDYRWIAPDALASLGDIKLTGGLEE 133

Query: 118 VIAAARRLV 126
           VI +A RL+
Sbjct: 134 VIQSAARLI 142


>ref|YP_579144.1| NUDIX hydrolase [Nitrobacter hamburgensis X14]
 gb|ABE64684.1| NUDIX hydrolase [Nitrobacter hamburgensis X14]
          Length = 143

 Score =  178 bits (451), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 88/126 (69%), Positives = 101/126 (80%)

Query: 1   VSGVIFRDGKVLLVRRARSPGKGFYSLPGGRVEFGETLHTALHREIDEETGLKVEILGLA 60
           VS  IFRDGKVLLVRRAR PGKG +SLPGGRVEFGET+  ALHRE+ EE GL VEI+GLA
Sbjct: 16  VSAAIFRDGKVLLVRRARPPGKGLHSLPGGRVEFGETMAEALHREVAEEAGLTVEIVGLA 75

Query: 61  GWREVLPAGPGGGHYLIMTFAARWASREPHLNDEHDDFKWLAPEEIGDLKVTGGLHEVIA 120
           GWREV+PA PG GHYL+M+FAARW + EP LNDE D F+W+ PE   DL +T GL  +I 
Sbjct: 76  GWREVIPAQPGHGHYLVMSFAARWVAGEPVLNDELDAFRWVVPELPDDLGLTEGLQTIID 135

Query: 121 AARRLV 126
           +ARRLV
Sbjct: 136 SARRLV 141


>ref|YP_319305.1| NUDIX hydrolase [Nitrobacter winogradskyi Nb-255]
 gb|ABA05953.1| NUDIX hydrolase [Nitrobacter winogradskyi Nb-255]
          Length = 138

 Score =  176 bits (446), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 85/126 (67%), Positives = 101/126 (80%)

Query: 1   VSGVIFRDGKVLLVRRARSPGKGFYSLPGGRVEFGETLHTALHREIDEETGLKVEILGLA 60
           VS  IFRDGKVLLVRRAR P KG +SLPGGR+ FGET+  ALHRE+ EETGL++EI GLA
Sbjct: 11  VSAAIFRDGKVLLVRRARPPAKGLHSLPGGRIAFGETVAAALHREVAEETGLRIEITGLA 70

Query: 61  GWREVLPAGPGGGHYLIMTFAARWASREPHLNDEHDDFKWLAPEEIGDLKVTGGLHEVIA 120
           GWREV+P  PG GHY++M+FAARW + EP LNDE D F W+APE  G+L++T GL  +I 
Sbjct: 71  GWREVMPTLPGDGHYIVMSFAARWIAGEPILNDELDAFSWVAPELPGELRLTEGLRTIID 130

Query: 121 AARRLV 126
           AARRLV
Sbjct: 131 AARRLV 136


>ref|YP_568382.1| NUDIX hydrolase [Rhodopseudomonas palustris BisB5]
 gb|ABE38481.1| NUDIX hydrolase [Rhodopseudomonas palustris BisB5]
          Length = 141

 Score =  171 bits (433), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 84/126 (66%), Positives = 96/126 (76%)

Query: 1   VSGVIFRDGKVLLVRRARSPGKGFYSLPGGRVEFGETLHTALHREIDEETGLKVEILGLA 60
           VS  IFRDG VLLVRRARSPG+G YSLPGGRVEF ETL  AL RE+ EET L + I G A
Sbjct: 14  VSASIFRDGDVLLVRRARSPGRGLYSLPGGRVEFSETLEAALEREVREETALTIGIAGFA 73

Query: 61  GWREVLPAGPGGGHYLIMTFAARWASREPHLNDEHDDFKWLAPEEIGDLKVTGGLHEVIA 120
           GWREV+P     GHY+I++FAARW + EP LNDE DD  W+APE IGD KVT GL  ++A
Sbjct: 74  GWREVVPGPANAGHYVILSFAARWIAGEPVLNDELDDAVWVAPEAIGDFKVTEGLPAIVA 133

Query: 121 AARRLV 126
           AARRL+
Sbjct: 134 AARRLI 139


>ref|ZP_01045347.1| NUDIX hydrolase [Nitrobacter sp. Nb-311A]
 gb|EAQ36675.1| NUDIX hydrolase [Nitrobacter sp. Nb-311A]
          Length = 162

 Score =  171 bits (432), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 84/126 (66%), Positives = 99/126 (78%)

Query: 1   VSGVIFRDGKVLLVRRARSPGKGFYSLPGGRVEFGETLHTALHREIDEETGLKVEILGLA 60
           VS  IFRDGKVLLVRRARSPGKG +SLPGG + FGET+  ALHRE+ EETGL VEI GLA
Sbjct: 35  VSAAIFRDGKVLLVRRARSPGKGLHSLPGGCIAFGETIVAALHREVLEETGLTVEIAGLA 94

Query: 61  GWREVLPAGPGGGHYLIMTFAARWASREPHLNDEHDDFKWLAPEEIGDLKVTGGLHEVIA 120
           GWREV+PA PG  HY++++FAARW + EP LNDE D F W+APE  G+L++T GL  +I 
Sbjct: 95  GWREVMPARPGDAHYIVLSFAARWIAGEPVLNDELDAFSWVAPEWPGELRLTEGLQPIID 154

Query: 121 AARRLV 126
            A RLV
Sbjct: 155 TACRLV 160