BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0110.0065.p         (126 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_770249.1| hypothetical protein blr3609 [Bradyrhizobium ja...   204   4e-51
ref|YP_002362662.1| putative exported protease/peptidase [Methyl...    84   6e-15
ref|YP_002985178.1| peptidase S1 and S6 chymotrypsin/Hap [Rhizob...    80   9e-14
ref|YP_472296.1| serine protease [Rhizobium etli CFN 42] >gi|862...    78   4e-13
ref|YP_771623.1| putative exported protease/peptidase [Rhizobium...    78   4e-13

>ref|NP_770249.1| hypothetical protein blr3609 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC48874.1| blr3609 [Bradyrhizobium japonicum USDA 110]
          Length = 215

 Score =  204 bits (519), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 97/126 (76%), Positives = 114/126 (90%)

Query: 1   MLVDVDAEGRMSQIFPTAELLAQSVGPDMNLVKPGVQFIVPTPAAQQRGFEYVVAPPAGS 60
           +LVDVDAEGRMSQIFPT ELLAQS G D+NLVKPGV+F+VPTPAA+QRGFEYVV+PP GS
Sbjct: 90  ILVDVDAEGRMSQIFPTPELLAQSDGRDINLVKPGVEFVVPTPAARQRGFEYVVSPPTGS 149

Query: 61  AVIVAILSERRVQLLDLPDIQRKLQGPADTLSYLSDWTSQLRIPEGGGGRLLPNNWSFDI 120
           AV++AILSERRVQLLDLPD+ RKLQ  A+ LSYL+ WTS+LR+P+ G G+L+ NNWSFD+
Sbjct: 150 AVMIAILSERRVQLLDLPDLPRKLQDQAEALSYLTAWTSELRVPDNGSGKLVTNNWSFDV 209

Query: 121 KSYSIK 126
           KSYSIK
Sbjct: 210 KSYSIK 215


>ref|YP_002362662.1| putative exported protease/peptidase [Methylocella silvestris BL2]
 gb|ACK51300.1| putative exported protease/peptidase [Methylocella silvestris BL2]
          Length = 208

 Score = 84.0 bits (206), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 50/128 (39%), Positives = 74/128 (57%), Gaps = 3/128 (2%)

Query: 1   MLVDVDAEGRMSQIFPTAELLAQSVGPD--MNLVKPGVQFIVPTPAAQQRGFEYVVAPPA 58
           +LVDVDA G+++Q +P    +A   G     NLV+PG    +P        FEYV   PA
Sbjct: 79  VLVDVDASGKVTQRYPNLYSMALPAGASEKANLVQPGRIVSIPDNFNPFAHFEYVAEAPA 138

Query: 59  GSAVIVAILSERRVQLLDLPDIQRKLQGPADTLSYLSDWTSQLRIPEGGGGRLLPN-NWS 117
           G  +I+A+LS + V ++DLPD+ + + G    +++L D   +LRI +  G   L + NWS
Sbjct: 139 GKGMILALLSPKPVHVVDLPDVPQDMVGTRAAVAFLYDAAKRLRIADRDGKAPLADPNWS 198

Query: 118 FDIKSYSI 125
           F +KSYSI
Sbjct: 199 FAVKSYSI 206


>ref|YP_002985178.1| peptidase S1 and S6 chymotrypsin/Hap [Rhizobium leguminosarum bv.
           trifolii WSM1325]
 gb|ACS60216.1| peptidase S1 and S6 chymotrypsin/Hap [Rhizobium leguminosarum bv.
           trifolii WSM1325]
          Length = 841

 Score = 80.5 bits (197), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 49/128 (38%), Positives = 68/128 (53%), Gaps = 3/128 (2%)

Query: 1   MLVDVDAEGRMSQIFPTAEL--LAQSVGPDMNLVKPGVQFIVPTPAAQQRGFEYVVAPPA 58
           +LVD+DA G+++Q+FP      L  S     N + P    +VP       GFEYVV  PA
Sbjct: 715 ILVDIDASGKLTQLFPNKRSMGLKPSAKSGDNRLDPARPVVVPDARNPYTGFEYVVEGPA 774

Query: 59  GSAVIVAILSERRVQLLDLPDIQRKLQGPADTLSYLSDWTSQLRIPEGGGGRLLPNNWSF 118
           G  ++VAILS++ +++LDLPD+   L G     +Y+ D    LRI  G         WSF
Sbjct: 775 GVGMVVAILSDKPIEVLDLPDVPTPLVGQRAAFNYVYDLARSLRI-VGDDETGAQGKWSF 833

Query: 119 DIKSYSIK 126
           D K Y I+
Sbjct: 834 DSKFYRIR 841


>ref|YP_472296.1| serine protease [Rhizobium etli CFN 42]
 gb|ABC93569.1| putative serine protease protein, trypsin family [Rhizobium etli
           CFN 42]
          Length = 848

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 71/129 (55%), Gaps = 5/129 (3%)

Query: 1   MLVDVDAEGRMSQIFPTAELLA---QSVGPDMNLVKPGVQFIVPTPAAQQRGFEYVVAPP 57
           +LVD+DA G+++Q++P    +     + G D N + P    +VP       GFEYVV  P
Sbjct: 722 ILVDIDAAGKLTQLYPNKRSMGLKPTAKGGD-NRLDPARPVVVPDARNPYIGFEYVVEGP 780

Query: 58  AGSAVIVAILSERRVQLLDLPDIQRKLQGPADTLSYLSDWTSQLRIPEGGGGRLLPNNWS 117
           AG  ++VAILS++ +++LDLPD+   L G     +Y+ D    LRI  G     +   WS
Sbjct: 781 AGVGMVVAILSDKPIEVLDLPDVPTPLVGQRAAFNYVYDLARSLRIV-GDDETGVQGKWS 839

Query: 118 FDIKSYSIK 126
           FD K Y I+
Sbjct: 840 FDSKFYRIR 848


>ref|YP_771623.1| putative exported protease/peptidase [Rhizobium leguminosarum bv.
           viciae 3841]
 emb|CAK03542.1| putative exported protease/peptidase [Rhizobium leguminosarum bv.
           viciae 3841]
          Length = 837

 Score = 78.2 bits (191), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 47/128 (36%), Positives = 68/128 (53%), Gaps = 3/128 (2%)

Query: 1   MLVDVDAEGRMSQIFPTAEL--LAQSVGPDMNLVKPGVQFIVPTPAAQQRGFEYVVAPPA 58
           +LVD+DA G+++Q++P      L  +     N + P    +VP       GFEYVV  PA
Sbjct: 711 ILVDIDASGKLTQLYPNKRSMGLKPTAKSGDNRLDPARPVVVPDARNPYTGFEYVVEGPA 770

Query: 59  GSAVIVAILSERRVQLLDLPDIQRKLQGPADTLSYLSDWTSQLRIPEGGGGRLLPNNWSF 118
           G  ++VAILS++ +++LDLPD+   L G     +Y+ D    LRI  G         WSF
Sbjct: 771 GVGMVVAILSDKPIEVLDLPDVPTPLVGQRAAFNYVYDLARSLRIV-GDDETGAQGKWSF 829

Query: 119 DIKSYSIK 126
           D K Y I+
Sbjct: 830 DSKFYRIR 837