BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0110.0063.p         (185 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_770252.1| hypothetical protein blr3612 [Bradyrhizobium ja...   247   6e-64
ref|XP_002594191.1| hypothetical protein BRAFLDRAFT_174415 [Bran...    42   0.051
ref|XP_002641437.1| Hypothetical protein CBG13306 [Caenorhabditi...    41   0.10 
ref|ZP_01907624.1| hypothetical protein PPSIR1_35232 [Plesiocyst...    40   0.11 
ref|ZP_08879501.1| sodium/hydrogen exchanger [Saccharopolyspora ...    39   0.24 

>ref|NP_770252.1| hypothetical protein blr3612 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC48877.1| blr3612 [Bradyrhizobium japonicum USDA 110]
          Length = 153

 Score =  247 bits (630), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 120/153 (78%), Positives = 135/153 (88%), Gaps = 1/153 (0%)

Query: 34  VVNKIWAKAKIAFVINDYVEDKPLDMAKSARNNDQRVLDVLSLRHAPDNAVHIYLVNPIV 93
           +VN IW+KAKIAFVI+D + +KPLDMAKSAR+NDQR+L VL+ RH PDNA+HIYLVN I 
Sbjct: 1   MVNTIWSKAKIAFVISDCLMEKPLDMAKSARSNDQRLLGVLTSRHDPDNAIHIYLVNSIE 60

Query: 94  NLSAGGGSYLHSDPEPASFVQWYGNDFANGRAWAHELGHLMSLDHVDVDYADEKQAALR- 152
           NLSAGGGSY +S+PEPASFVQWYGND ANGRAWAHELGHLMSLDHV++DY++EKQAA R 
Sbjct: 61  NLSAGGGSYPNSEPEPASFVQWYGNDHANGRAWAHELGHLMSLDHVEIDYSNEKQAAQRV 120

Query: 153 SNLMTKGLSVGSDLTGQQISTAKSSKLVKRFGG 185
            NLMT GLS GSDLTGQQI  AK SKLVKRFGG
Sbjct: 121 KNLMTIGLSAGSDLTGQQIDAAKGSKLVKRFGG 153


>ref|XP_002594191.1| hypothetical protein BRAFLDRAFT_174415 [Branchiostoma floridae]
 gb|EEN50202.1| hypothetical protein BRAFLDRAFT_174415 [Branchiostoma floridae]
          Length = 420

 Score = 41.6 bits (96), Expect = 0.051,   Method: Compositional matrix adjust.
 Identities = 39/149 (26%), Positives = 58/149 (38%), Gaps = 27/149 (18%)

Query: 16  GVAEPQKWSGEAAKKALDVVNKIWAKAKIAFVINDYVEDKPLDMAKSARNNDQRVLDVLS 75
           GVA+    +  A K+   +    W K  + + I+ Y +D P    +SA    ++   V +
Sbjct: 28  GVADIVGTANSARKRRYAIQGSRWRKHDLTYRISAYTQDLPAFEVESAV---EKAFQVWA 84

Query: 76  LRHAPDNAVHIYLVNPIVNLSAGGGSYLHSDPEPAS-------FVQWYGND--FANGRAW 126
            RH P     IY   P +++    G +   +P   S       F   YG D  F +G  W
Sbjct: 85  -RHTPLTFTRIYWGRPDLDVKFSVGEHGDGNPFDGSGGELAHAFFPQYGGDAHFDDGETW 143

Query: 127 --------------AHELGHLMSLDHVDV 141
                         AHE GH + L H DV
Sbjct: 144 TVRTPGGTDLFIVAAHEFGHSLGLGHSDV 172


>ref|XP_002641437.1| Hypothetical protein CBG13306 [Caenorhabditis briggsae]
          Length = 355

 Score = 40.8 bits (94), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 4/69 (5%)

Query: 19  EPQKWSGEAAKKALDVVNKIWAKAKIAFVINDYVEDKP-LDMAKSARNNDQRVL--DVLS 75
           E ++WSGE   K + + + ++    IA    D   +KP L+   S +NN Q+V   D + 
Sbjct: 92  EKEQWSGEEMAKKM-IASVVFDTGLIACAFKDLRNEKPSLNFCTSFKNNMQKVRAPDFVK 150

Query: 76  LRHAPDNAV 84
           L HAPDN +
Sbjct: 151 LTHAPDNFI 159


>ref|ZP_01907624.1| hypothetical protein PPSIR1_35232 [Plesiocystis pacifica SIR-1]
 gb|EDM79491.1| hypothetical protein PPSIR1_35232 [Plesiocystis pacifica SIR-1]
          Length = 433

 Score = 40.4 bits (93), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 40/93 (43%), Gaps = 6/93 (6%)

Query: 89  VNPIVNLSAGGGSYLHSDPEPASFVQWYGNDFANGRAWAHELGHLMSLDHVDVDYADEKQ 148
            NP + + A G       PEP           A+G   AHE+GH + L H DV   +   
Sbjct: 339 TNPSLVVLAAGACLDDGSPEPVK------TPTAHGLILAHEIGHYLGLHHSDVSLGEHLA 392

Query: 149 AALRSNLMTKGLSVGSDLTGQQISTAKSSKLVK 181
               + LM   +S+ SD +    ST ++  +++
Sbjct: 393 TGPEATLMRSDISMASDPSSAYFSTPQAEVMLR 425


>ref|ZP_08879501.1| sodium/hydrogen exchanger [Saccharopolyspora spinosa NRRL 18395]
          Length = 381

 Score = 39.3 bits (90), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 36/118 (30%), Positives = 51/118 (43%), Gaps = 11/118 (9%)

Query: 35  VNKIWAKAKIAFVINDYVEDKPLDMAKSARNNDQRVLDVLSLRHAPDNAVHIYLVNPIVN 94
           V  I A A I +V +  +  + LD     R  ++    VLS+    D A+ +YL  PI+ 
Sbjct: 115 VTGIVALAGITWVSSSTIVSRLLD--DLHRLGNRETPAVLSILLLEDFAMAVYL--PILA 170

Query: 95  LSAGGGSYLHSDPEPASFVQWYGNDFANGRAWAHELGHLMSLDHVDVDYADEKQAALR 152
           + A GG+ LH     A  V          R W H +GHL       V+  D +Q  LR
Sbjct: 171 VLATGGTVLHGLASVAVAVGVLLLALGASRRWGHRVGHL-------VEDRDTEQLLLR 221