BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0110.0026.p         (123 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_08628584.1| flagellar assembly protein FliH [Bradyrhizobi...   200   7e-50
ref|YP_001237983.1| flagellar assembly protein H [Bradyrhizobium...   189   9e-47
ref|YP_001207779.1| flagellar assembly protein H [Bradyrhizobium...   185   3e-45
ref|NP_773641.1| flagellar assembly protein H [Bradyrhizobium ja...   184   3e-45
ref|YP_001990474.1| flagellar assembly protein H [Rhodopseudomon...   176   1e-42

>ref|ZP_08628584.1| flagellar assembly protein FliH [Bradyrhizobiaceae bacterium SG-6C]
 gb|EGP08649.1| flagellar assembly protein FliH [Bradyrhizobiaceae bacterium SG-6C]
          Length = 215

 Score =  200 bits (508), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 96/123 (78%), Positives = 108/123 (87%)

Query: 1   METEAVDVAVAVARKLCSELIAREPLGEITALVSDCFSHLVATPHLVVRINDALYEAAHD 60
           METEAVDVA+AVARKLC+ELIA EPL E+ ALVSDCF HL ATPHLVVRINDALY+AA  
Sbjct: 85  METEAVDVALAVARKLCTELIAAEPLTEMMALVSDCFRHLTATPHLVVRINDALYDAARA 144

Query: 61  NIERMAAHSGFQGRLVILAEPTIATGDCRIEWADGGVVLERAAIEGKINELVGRYLASRG 120
            IE++A  SGF+G+LVILAEP IATGDC+IEWADGGV L+R+ I+ KINELVGRYLASR 
Sbjct: 145 RIEQLAKQSGFEGKLVILAEPDIATGDCKIEWADGGVTLDRSTIDAKINELVGRYLASRN 204

Query: 121 QAG 123
           QAG
Sbjct: 205 QAG 207


>ref|YP_001237983.1| flagellar assembly protein H [Bradyrhizobium sp. BTAi1]
 gb|ABQ34077.1| putative protein involved in flagellar synthesis [Bradyrhizobium
           sp. BTAi1]
          Length = 205

 Score =  189 bits (481), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 97/119 (81%), Positives = 109/119 (91%)

Query: 1   METEAVDVAVAVARKLCSELIAREPLGEITALVSDCFSHLVATPHLVVRINDALYEAAHD 60
           METEAVDVAVAVARKLC+ L+A EPLGEIT LV DCF+HLV+TPHLV+RIND+LYEAAHD
Sbjct: 85  METEAVDVAVAVARKLCAALVAAEPLGEITGLVRDCFAHLVSTPHLVLRINDSLYEAAHD 144

Query: 61  NIERMAAHSGFQGRLVILAEPTIATGDCRIEWADGGVVLERAAIEGKINELVGRYLASR 119
            IE++A  SGF+GRLVILAEP I TGDCRIEWADGGVVLERAAI+ KINELVGRY+AS+
Sbjct: 145 KIEKLAKQSGFEGRLVILAEPEIETGDCRIEWADGGVVLERAAIDAKINELVGRYMASK 203


>ref|YP_001207779.1| flagellar assembly protein H [Bradyrhizobium sp. ORS 278]
 emb|CAL79564.1| putative protein involved in flagellar synthesis [Bradyrhizobium
           sp. ORS 278]
          Length = 205

 Score =  185 bits (469), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 97/119 (81%), Positives = 107/119 (89%)

Query: 1   METEAVDVAVAVARKLCSELIAREPLGEITALVSDCFSHLVATPHLVVRINDALYEAAHD 60
           METEAVDVAVAVARKLC+ LI  EPLGEIT LV DCF+HLVATPHLV+RINDALYE A +
Sbjct: 85  METEAVDVAVAVARKLCAALIEAEPLGEITGLVHDCFAHLVATPHLVLRINDALYELARE 144

Query: 61  NIERMAAHSGFQGRLVILAEPTIATGDCRIEWADGGVVLERAAIEGKINELVGRYLASR 119
            IE++A  SGF+GRLVILAEP IATGDCRIEWADGGVVLERAAI+ KINELVGRY+AS+
Sbjct: 145 KIEKLAKQSGFEGRLVILAEPEIATGDCRIEWADGGVVLERAAIDAKINELVGRYMASK 203


>ref|NP_773641.1| flagellar assembly protein H [Bradyrhizobium japonicum USDA 110]
 dbj|BAC52266.1| blr7001 [Bradyrhizobium japonicum USDA 110]
          Length = 206

 Score =  184 bits (468), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 96/119 (80%), Positives = 108/119 (90%)

Query: 1   METEAVDVAVAVARKLCSELIAREPLGEITALVSDCFSHLVATPHLVVRINDALYEAAHD 60
           METEAV+VAVAVARKLC++L+A EPLGEI ALV DCFSHLVATPHLVVRINDALY++A +
Sbjct: 85  METEAVEVAVAVARKLCADLVAAEPLGEIVALVKDCFSHLVATPHLVVRINDALYDSARE 144

Query: 61  NIERMAAHSGFQGRLVILAEPTIATGDCRIEWADGGVVLERAAIEGKINELVGRYLASR 119
            IER+A  SGF+GRLVILAEP IATGDCRIEWADGGVVLER AI  KI+E+VGRY+ASR
Sbjct: 145 KIERLAKQSGFEGRLVILAEPEIATGDCRIEWADGGVVLERGAIAAKIDEMVGRYIASR 203


>ref|YP_001990474.1| flagellar assembly protein H [Rhodopseudomonas palustris TIE-1]
 gb|ACE99998.1| flagellar assembly protein H [Rhodopseudomonas palustris TIE-1]
          Length = 208

 Score =  176 bits (445), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 92/119 (77%), Positives = 103/119 (86%)

Query: 1   METEAVDVAVAVARKLCSELIAREPLGEITALVSDCFSHLVATPHLVVRINDALYEAAHD 60
           METEAV+VA+A ARKLC ELIA EPL EITALV DCF HLVATPHLVVRIND+LYEAA +
Sbjct: 86  METEAVEVAIAAARKLCGELIAAEPLAEITALVGDCFRHLVATPHLVVRINDSLYEAARE 145

Query: 61  NIERMAAHSGFQGRLVILAEPTIATGDCRIEWADGGVVLERAAIEGKINELVGRYLASR 119
            IE +A  SGF GRLV+LA+P IA GDC+IEWADGGVVLERA +E KI+ELVGRY+ASR
Sbjct: 146 RIELLAKQSGFAGRLVLLADPEIAGGDCKIEWADGGVVLERATVEAKIDELVGRYMASR 204