BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0110.0023.p         (51 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_001237979.1| hypothetical protein BBta_1870 [Bradyrhizobi...    79   2e-13
ref|YP_001207784.1| putative signal peptide [Bradyrhizobium sp. ...    79   2e-13
ref|YP_004110465.1| hypothetical protein Rpdx1_4179 [Rhodopseudo...    78   5e-13
ref|YP_570963.1| hypothetical protein RPD_3841 [Rhodopseudomonas...    76   1e-12
ref|YP_530835.1| hypothetical protein RPC_0946 [Rhodopseudomonas...    75   2e-12

>ref|YP_001237979.1| hypothetical protein BBta_1870 [Bradyrhizobium sp. BTAi1]
 gb|ABQ34073.1| putative exported protein of unknown function [Bradyrhizobium sp.
          BTAi1]
          Length = 51

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/51 (66%), Positives = 40/51 (78%)

Query: 1  MKRVGTWLFYLVGAIAVAYLALYAYVTFTGRDITPGDPIRIFRKPDAPSYS 51
          MKR+GTW  YLVG +A+ YLALYAY   T R+ TPGDPI IFR P+AP+YS
Sbjct: 1  MKRIGTWALYLVGTVAILYLALYAYAVLTQREFTPGDPIHIFRNPEAPNYS 51


>ref|YP_001207784.1| putative signal peptide [Bradyrhizobium sp. ORS 278]
 emb|CAL79569.1| conserved hypothetical protein; putative signal peptide
          [Bradyrhizobium sp. ORS 278]
          Length = 51

 Score = 79.0 bits (193), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 34/51 (66%), Positives = 41/51 (80%)

Query: 1  MKRVGTWLFYLVGAIAVAYLALYAYVTFTGRDITPGDPIRIFRKPDAPSYS 51
          MKR+GTW  Y+VG +A+ YLALYAY  FT R+ TPGDPI IFR P+APS+S
Sbjct: 1  MKRIGTWALYVVGTVAMLYLALYAYAMFTQREFTPGDPIHIFRNPEAPSFS 51


>ref|YP_004110465.1| hypothetical protein Rpdx1_4179 [Rhodopseudomonas palustris DX-1]
 gb|ADU45732.1| hypothetical protein Rpdx1_4179 [Rhodopseudomonas palustris DX-1]
          Length = 51

 Score = 77.8 bits (190), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 36/51 (70%), Positives = 40/51 (78%)

Query: 1  MKRVGTWLFYLVGAIAVAYLALYAYVTFTGRDITPGDPIRIFRKPDAPSYS 51
          M+RV TWLFY VGA+A AYLALYAY   T   +TPG+PIRIFR PDAP YS
Sbjct: 1  MRRVATWLFYGVGALACAYLALYAYAMLTAPKLTPGEPIRIFRNPDAPKYS 51


>ref|YP_570963.1| hypothetical protein RPD_3841 [Rhodopseudomonas palustris BisB5]
 gb|ABE41062.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
          Length = 51

 Score = 76.3 bits (186), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 34/51 (66%), Positives = 39/51 (76%)

Query: 1  MKRVGTWLFYLVGAIAVAYLALYAYVTFTGRDITPGDPIRIFRKPDAPSYS 51
          M+RV  WLFY VGA+A AYLALYAY   T   +TPG+PI+IFR PDAP YS
Sbjct: 1  MRRVAIWLFYCVGALACAYLALYAYSVLTAPKLTPGEPIKIFRNPDAPKYS 51


>ref|YP_530835.1| hypothetical protein RPC_0946 [Rhodopseudomonas palustris BisB18]
 gb|ABD86516.1| conserved hypothetical protein [Rhodopseudomonas palustris
          BisB18]
          Length = 51

 Score = 75.5 bits (184), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 33/51 (64%), Positives = 40/51 (78%)

Query: 1  MKRVGTWLFYLVGAIAVAYLALYAYVTFTGRDITPGDPIRIFRKPDAPSYS 51
          M+RV TWLFY +GA+A+ YLALYAY   T   +TPG+PIRIFR P+AP YS
Sbjct: 1  MRRVATWLFYAIGALAILYLALYAYAVLTAPKLTPGEPIRIFRNPNAPDYS 51