BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0110.0009.p (369 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_773681.1| exodeoxyribosylnuclease [Bradyrhizobium japonic... 707 0.0 ref|YP_576033.1| exodeoxyribonuclease V [Nitrobacter hamburgensi... 706 0.0 gb|AAM47037.1| exodeoxyribosylnuclease EdrN [Bradyrhizobium japo... 701 0.0 ref|ZP_01044550.1| exodeoxyribonuclease V [Nitrobacter sp. Nb-31... 700 0.0 ref|YP_317213.1| exodeoxyribonuclease V [Nitrobacter winogradsky... 696 0.0 >ref|NP_773681.1| exodeoxyribosylnuclease [Bradyrhizobium japonicum USDA 110] dbj|BAC52306.1| exodeoxyribosylnuclease [Bradyrhizobium japonicum USDA 110] Length = 384 Score = 707 bits (1826), Expect = 0.0, Method: Compositional matrix adjust. Identities = 338/371 (91%), Positives = 355/371 (95%), Gaps = 2/371 (0%) Query: 1 MTTFTPHQDTALKAVADWLKAKPGQGGTPPVFRLFGYAGTGKTTLARHIAEGVDGEVKFA 60 M TFTPHQD ALKAV DWLKAKPG+GGTPPVFRLFG+AGTGKTTLARHIAEGVDGEVKFA Sbjct: 14 MATFTPHQDAALKAVGDWLKAKPGRGGTPPVFRLFGFAGTGKTTLARHIAEGVDGEVKFA 73 Query: 61 AFTGKAALVMRNKGCDSASTIHSLIYRARESGVEQPSFELWDDAPASKAKLIVIDECSMV 120 AFTGKAALVMRNKGCD ASTIHSLIYRARESG EQPSFELWDDAPASKAKLIVIDECSMV Sbjct: 74 AFTGKAALVMRNKGCDEASTIHSLIYRARESGEEQPSFELWDDAPASKAKLIVIDECSMV 133 Query: 121 DAELGRDLMSFDCPLLVLGDPAQLPPIQGGGFFTDAEPDAMLTEVHRQAQDDPIVRMSMD 180 DAELGRDLMSFDCPLLVLGDPAQLPPIQGGGFFT+ EPDAMLTEVHRQAQDDPIVRMSMD Sbjct: 134 DAELGRDLMSFDCPLLVLGDPAQLPPIQGGGFFTNTEPDAMLTEVHRQAQDDPIVRMSMD 193 Query: 181 IREGRELEIGRHGESEVVSRKELDPDRVMSADQVLVGRNNTRRAYNMRVRQRQNIEDPLP 240 +REGREL+IGR+GESEVVSRKELDPDRVM ADQVLVGRNNTRRAYNMRVRQRQNIED P Sbjct: 194 VREGRELDIGRYGESEVVSRKELDPDRVMGADQVLVGRNNTRRAYNMRVRQRQNIEDAFP 253 Query: 241 VAGDKLVCLRNNRKKGLFNGGLWRVKAR--AQSKSRIITMRVMPDEDFGYKVTKVSVRGE 298 VAGDKLVCLRNNRKKGLFNGGLWRVK+R ++SKSRI++MR+ PDED G+KVTKVSVR + Sbjct: 254 VAGDKLVCLRNNRKKGLFNGGLWRVKSRNTSRSKSRILSMRLSPDEDLGHKVTKVSVRAD 313 Query: 299 CFDGGVESVPWEQRKPYDEFDYGYVLTVHKSQGSQWDDVVLFDESFAFQDSRARWLYTGI 358 CF+GGVE + WEQRKPYDEFDYGYVLTVHKSQGSQWDDVVLFDESFAFQDSRARWLYTGI Sbjct: 314 CFEGGVEQIAWEQRKPYDEFDYGYVLTVHKSQGSQWDDVVLFDESFAFQDSRARWLYTGI 373 Query: 359 TRAAKRLSVVV 369 TRAAKRLS+VV Sbjct: 374 TRAAKRLSIVV 384 >ref|YP_576033.1| exodeoxyribonuclease V [Nitrobacter hamburgensis X14] gb|ABE61573.1| exodeoxyribonuclease V [Nitrobacter hamburgensis X14] Length = 369 Score = 706 bits (1821), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/369 (90%), Positives = 353/369 (95%) Query: 1 MTTFTPHQDTALKAVADWLKAKPGQGGTPPVFRLFGYAGTGKTTLARHIAEGVDGEVKFA 60 MT+FTPHQDTALKAVADWLKAKPG+ TPPVFRLFGYAGTGKTTLARHIA+GVDGEVKFA Sbjct: 1 MTSFTPHQDTALKAVADWLKAKPGKNSTPPVFRLFGYAGTGKTTLARHIADGVDGEVKFA 60 Query: 61 AFTGKAALVMRNKGCDSASTIHSLIYRARESGVEQPSFELWDDAPASKAKLIVIDECSMV 120 AFTGKAALVMRNKGCD ASTIHSLIYRARESG EQPSFELWDDAPASKAKLIVIDECSMV Sbjct: 61 AFTGKAALVMRNKGCDGASTIHSLIYRARESGEEQPSFELWDDAPASKAKLIVIDECSMV 120 Query: 121 DAELGRDLMSFDCPLLVLGDPAQLPPIQGGGFFTDAEPDAMLTEVHRQAQDDPIVRMSMD 180 DAELGRDLMSFDCPLLVLGDPAQLPPIQG GFFT+AEPDAMLTEVHRQAQDDPIVRMSMD Sbjct: 121 DAELGRDLMSFDCPLLVLGDPAQLPPIQGAGFFTNAEPDAMLTEVHRQAQDDPIVRMSMD 180 Query: 181 IREGRELEIGRHGESEVVSRKELDPDRVMSADQVLVGRNNTRRAYNMRVRQRQNIEDPLP 240 +REGR+L+IGR+GESEVV+R ELDP RVM ADQVLVGRNNTRR+YNMR RQRQNIEDPLP Sbjct: 181 VREGRDLDIGRYGESEVVARSELDPTRVMDADQVLVGRNNTRRSYNMRFRQRQNIEDPLP 240 Query: 241 VAGDKLVCLRNNRKKGLFNGGLWRVKARAQSKSRIITMRVMPDEDFGYKVTKVSVRGECF 300 VAGDKLVCLRNNRKK LFNGGLWRVK+RA SKS+IITMR+ PDE+F +KVTKVSVR +CF Sbjct: 241 VAGDKLVCLRNNRKKALFNGGLWRVKSRAASKSKIITMRLSPDEEFAHKVTKVSVRQDCF 300 Query: 301 DGGVESVPWEQRKPYDEFDYGYVLTVHKSQGSQWDDVVLFDESFAFQDSRARWLYTGITR 360 GG+E +PWEQRKPYDEFDYGYVLTVHKSQGSQWDDVVLFDESFAFQDSRARWLYTGITR Sbjct: 301 AGGIEDIPWEQRKPYDEFDYGYVLTVHKSQGSQWDDVVLFDESFAFQDSRARWLYTGITR 360 Query: 361 AAKRLSVVV 369 AAKRLS+VV Sbjct: 361 AAKRLSIVV 369 >gb|AAM47037.1| exodeoxyribosylnuclease EdrN [Bradyrhizobium japonicum] Length = 371 Score = 701 bits (1808), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/371 (90%), Positives = 354/371 (95%), Gaps = 2/371 (0%) Query: 1 MTTFTPHQDTALKAVADWLKAKPGQGGTPPVFRLFGYAGTGKTTLARHIAEGVDGEVKFA 60 M TFTPHQD ALKAV DWLKAKPG+GGTPPVFRLFG+AGTGKTTLARHIAEGVDGEVKFA Sbjct: 1 MATFTPHQDAALKAVGDWLKAKPGRGGTPPVFRLFGFAGTGKTTLARHIAEGVDGEVKFA 60 Query: 61 AFTGKAALVMRNKGCDSASTIHSLIYRARESGVEQPSFELWDDAPASKAKLIVIDECSMV 120 AFTGKAALVMRNKGCD ASTIHSLIYRARESG EQPSFELWDDAPASKAKLIVIDECSMV Sbjct: 61 AFTGKAALVMRNKGCDEASTIHSLIYRARESGEEQPSFELWDDAPASKAKLIVIDECSMV 120 Query: 121 DAELGRDLMSFDCPLLVLGDPAQLPPIQGGGFFTDAEPDAMLTEVHRQAQDDPIVRMSMD 180 DAELGRDLMSFDCPLLVLGDPA +PPIQGGGFFT+ EPDAMLTEVHRQAQDDPIVRMSMD Sbjct: 121 DAELGRDLMSFDCPLLVLGDPAHVPPIQGGGFFTNTEPDAMLTEVHRQAQDDPIVRMSMD 180 Query: 181 IREGRELEIGRHGESEVVSRKELDPDRVMSADQVLVGRNNTRRAYNMRVRQRQNIEDPLP 240 +REGREL+IGR+GESEVVSRKELDPDRVM ADQVLVGRNNTRRAYNMRVRQRQNIED P Sbjct: 181 VREGRELDIGRYGESEVVSRKELDPDRVMGADQVLVGRNNTRRAYNMRVRQRQNIEDAFP 240 Query: 241 VAGDKLVCLRNNRKKGLFNGGLWRVKAR--AQSKSRIITMRVMPDEDFGYKVTKVSVRGE 298 VAGDKLVCLRNNRKKGLFNGGLWRVK+R ++SKSRI++MR+ PDED G+KVTKVSVR + Sbjct: 241 VAGDKLVCLRNNRKKGLFNGGLWRVKSRNTSRSKSRILSMRLSPDEDLGHKVTKVSVRAD 300 Query: 299 CFDGGVESVPWEQRKPYDEFDYGYVLTVHKSQGSQWDDVVLFDESFAFQDSRARWLYTGI 358 CF+GGVE + WEQRKPYDEFDYGYVLTVHKS+GS+WDDVVLFDESFAFQDSRARWLYTGI Sbjct: 301 CFEGGVEQIAWEQRKPYDEFDYGYVLTVHKSEGSEWDDVVLFDESFAFQDSRARWLYTGI 360 Query: 359 TRAAKRLSVVV 369 TRAAKRLS+VV Sbjct: 361 TRAAKRLSIVV 371 >ref|ZP_01044550.1| exodeoxyribonuclease V [Nitrobacter sp. Nb-311A] gb|EAQ37331.1| exodeoxyribonuclease V [Nitrobacter sp. Nb-311A] Length = 371 Score = 700 bits (1806), Expect = 0.0, Method: Compositional matrix adjust. Identities = 334/369 (90%), Positives = 352/369 (95%) Query: 1 MTTFTPHQDTALKAVADWLKAKPGQGGTPPVFRLFGYAGTGKTTLARHIAEGVDGEVKFA 60 M +FTPHQDTALKAVADWLKAKPG+ GTPP+FRLFGYAGTGKTTLARHIA+GVDGEVKFA Sbjct: 1 MASFTPHQDTALKAVADWLKAKPGKNGTPPIFRLFGYAGTGKTTLARHIADGVDGEVKFA 60 Query: 61 AFTGKAALVMRNKGCDSASTIHSLIYRARESGVEQPSFELWDDAPASKAKLIVIDECSMV 120 AFTGKAALVMRNKGCD ASTIHSLIYRARESG EQPSFELWDDAPASKAKLIVIDECSMV Sbjct: 61 AFTGKAALVMRNKGCDGASTIHSLIYRARESGEEQPSFELWDDAPASKAKLIVIDECSMV 120 Query: 121 DAELGRDLMSFDCPLLVLGDPAQLPPIQGGGFFTDAEPDAMLTEVHRQAQDDPIVRMSMD 180 DAELGRDLMSFDCPLLVLGDPAQLPPIQGGGFFT+ PDAMLTEVHRQAQDDPIVRMSMD Sbjct: 121 DAELGRDLMSFDCPLLVLGDPAQLPPIQGGGFFTNVGPDAMLTEVHRQAQDDPIVRMSMD 180 Query: 181 IREGRELEIGRHGESEVVSRKELDPDRVMSADQVLVGRNNTRRAYNMRVRQRQNIEDPLP 240 +REGR L+IGR+GESEVVSR ELDP RVM ADQVLVGRNNTRR+YNMR+RQRQNIEDPLP Sbjct: 181 VREGRGLDIGRYGESEVVSRGELDPARVMDADQVLVGRNNTRRSYNMRMRQRQNIEDPLP 240 Query: 241 VAGDKLVCLRNNRKKGLFNGGLWRVKARAQSKSRIITMRVMPDEDFGYKVTKVSVRGECF 300 VAGDKLVCLRNNRKK LFNGGLWRVK+RA SKS+IITMR+ PDE+F +KVTKVSVR +CF Sbjct: 241 VAGDKLVCLRNNRKKALFNGGLWRVKSRAVSKSKIITMRLSPDEEFTHKVTKVSVRQDCF 300 Query: 301 DGGVESVPWEQRKPYDEFDYGYVLTVHKSQGSQWDDVVLFDESFAFQDSRARWLYTGITR 360 GG+E +PWEQRKPYDEFDYGYVLTVHKSQGSQWDDVVLFDESFAFQDSRARWLYTGITR Sbjct: 301 AGGIEDIPWEQRKPYDEFDYGYVLTVHKSQGSQWDDVVLFDESFAFQDSRARWLYTGITR 360 Query: 361 AAKRLSVVV 369 AAKRLSVVV Sbjct: 361 AAKRLSVVV 369 >ref|YP_317213.1| exodeoxyribonuclease V [Nitrobacter winogradskyi Nb-255] gb|ABA03861.1| exodeoxyribonuclease V [Nitrobacter winogradskyi Nb-255] Length = 369 Score = 696 bits (1797), Expect = 0.0, Method: Compositional matrix adjust. Identities = 332/369 (89%), Positives = 350/369 (94%) Query: 1 MTTFTPHQDTALKAVADWLKAKPGQGGTPPVFRLFGYAGTGKTTLARHIAEGVDGEVKFA 60 MT+FTPHQDTALKAVADWLKAKPG+ GTP VFRLFGYAGTGKTTLARHIA+GVDGEVKFA Sbjct: 1 MTSFTPHQDTALKAVADWLKAKPGRNGTPAVFRLFGYAGTGKTTLARHIADGVDGEVKFA 60 Query: 61 AFTGKAALVMRNKGCDSASTIHSLIYRARESGVEQPSFELWDDAPASKAKLIVIDECSMV 120 AFTGKAALVMRNKGC ASTIHSLIYR RESG EQPSFELWDDAPASKA+LIVIDECSMV Sbjct: 61 AFTGKAALVMRNKGCGGASTIHSLIYRTRESGEEQPSFELWDDAPASKARLIVIDECSMV 120 Query: 121 DAELGRDLMSFDCPLLVLGDPAQLPPIQGGGFFTDAEPDAMLTEVHRQAQDDPIVRMSMD 180 DAELGRDLMSFDCPLLVLGDPAQLPPIQG GFFT+A PDAMLTEVHRQA+DDPIVRMSMD Sbjct: 121 DAELGRDLMSFDCPLLVLGDPAQLPPIQGAGFFTNASPDAMLTEVHRQAKDDPIVRMSMD 180 Query: 181 IREGRELEIGRHGESEVVSRKELDPDRVMSADQVLVGRNNTRRAYNMRVRQRQNIEDPLP 240 +REGREL+IGR+GESEVV R ELDP RVM ADQVLVGRNNTRRAYNMR+RQRQNIEDPLP Sbjct: 181 VREGRELDIGRYGESEVVPRSELDPARVMDADQVLVGRNNTRRAYNMRMRQRQNIEDPLP 240 Query: 241 VAGDKLVCLRNNRKKGLFNGGLWRVKARAQSKSRIITMRVMPDEDFGYKVTKVSVRGECF 300 VAGDKLVCLRNNRKK LFNGGLWRVKARA S+S+IITMR+ PDE+F +KVTKVSVR +CF Sbjct: 241 VAGDKLVCLRNNRKKALFNGGLWRVKARAVSRSKIITMRLSPDEEFAHKVTKVSVRQDCF 300 Query: 301 DGGVESVPWEQRKPYDEFDYGYVLTVHKSQGSQWDDVVLFDESFAFQDSRARWLYTGITR 360 GG+E +PWEQRKPYDEFDYGYVLTVHKSQGSQWDDVVLFDESFAFQDSRARWLYTGITR Sbjct: 301 AGGIEDIPWEQRKPYDEFDYGYVLTVHKSQGSQWDDVVLFDESFAFQDSRARWLYTGITR 360 Query: 361 AAKRLSVVV 369 AAKRLSVVV Sbjct: 361 AAKRLSVVV 369