BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0110.0002.p         (144 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_773687.1| hypothetical protein bll7047 [Bradyrhizobium ja...   207   3e-52
ref|YP_001237961.1| hypothetical protein BBta_1852 [Bradyrhizobi...   191   2e-47
ref|YP_001207807.1| putative membrane protein and putative signa...   188   3e-46
ref|YP_001220552.1| putative membrane/exported protein of unknow...   176   8e-43
ref|YP_570809.1| hypothetical protein RPD_3687 [Rhodopseudomonas...   160   5e-38

>ref|NP_773687.1| hypothetical protein bll7047 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC52312.1| bll7047 [Bradyrhizobium japonicum USDA 110]
          Length = 141

 Score =  207 bits (528), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 96/141 (68%), Positives = 118/141 (83%)

Query: 1   MKRYLIFAAIGPFIGGFLLLLMTTYQSGYWTETSGGEVTKLLVVFVKSLQYNYLFGIVPS 60
           MKRYL+FA +GPF+GGFLLLL TTYQSGYWT+T+ GEV KL  VF K+LQY+YLFG +PS
Sbjct: 1   MKRYLVFALVGPFVGGFLLLLTTTYQSGYWTQTNLGEVGKLFAVFFKTLQYSYLFGFLPS 60

Query: 61  LMFGAIDDILMHVRRIAPVVRMLVVGAVAFVGAALTYASHGSESGAVQFILYGMVGFIPG 120
           LM GA+DDIL+H+RR+ PV+RML+VG  AFV A+LTY+S G +SGAVQFILYG+VGF+P 
Sbjct: 61  LMIGAVDDILLHIRRVGPVLRMLLVGLFAFVLASLTYSSRGPDSGAVQFILYGLVGFVPS 120

Query: 121 VITSWLAHKYAEELHAPAQPA 141
           V++SWL H+Y EE  A A P 
Sbjct: 121 VLSSWLVHRYVEEPQAAAAPT 141


>ref|YP_001237961.1| hypothetical protein BBta_1852 [Bradyrhizobium sp. BTAi1]
 gb|ABQ34055.1| putative membrane protein of unknown function [Bradyrhizobium sp.
           BTAi1]
          Length = 148

 Score =  191 bits (486), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 93/143 (65%), Positives = 112/143 (78%), Gaps = 3/143 (2%)

Query: 1   MKRYLIFAAIGPFIGGFLLLLMTTYQSGYWTETSGGEVTKLLVVFVKSLQYNYLFGIVPS 60
           MKRYLIF A+GP +GGF+LLL+TTY SGYWT T  GEV KL  VFV SLQ++YLFG +P+
Sbjct: 1   MKRYLIFVAVGPALGGFVLLLVTTYMSGYWTNTDAGEVAKLFKVFVTSLQFSYLFGFLPA 60

Query: 61  LMFGAIDDILMHVRRIAPVVRMLVVGAVAFVGAALTYASHGSESGAVQFILYGMVGFIPG 120
           LM  AIDDIL HVRRI P +RML+VG+V F+ A   YASHGS+SGA+Q+ILYGMVGFIP 
Sbjct: 61  LMMCAIDDILFHVRRIPPGLRMLLVGSVGFLLAGFNYASHGSDSGALQWILYGMVGFIPA 120

Query: 121 VITSWLAHKYAEEL---HAPAQP 140
            ++SWL H+Y +E     AP QP
Sbjct: 121 TVSSWLVHRYVDEPLPGAAPGQP 143


>ref|YP_001207807.1| putative membrane protein and putative signal peptide
           [Bradyrhizobium sp. ORS 278]
 emb|CAL79592.1| conserved hypothetical protein; putative membrane protein and
           putative signal peptide [Bradyrhizobium sp. ORS 278]
          Length = 145

 Score =  188 bits (477), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 89/133 (66%), Positives = 105/133 (78%)

Query: 1   MKRYLIFAAIGPFIGGFLLLLMTTYQSGYWTETSGGEVTKLLVVFVKSLQYNYLFGIVPS 60
           MKRYLIF AIGP +GGF LLL+TTY SGYW  T  GEV KL  VFV SLQY+YLFG +P+
Sbjct: 1   MKRYLIFVAIGPALGGFALLLVTTYLSGYWANTDAGEVAKLFKVFVTSLQYSYLFGFLPA 60

Query: 61  LMFGAIDDILMHVRRIAPVVRMLVVGAVAFVGAALTYASHGSESGAVQFILYGMVGFIPG 120
           LM  AIDDIL HVRRI PV+RML+VG +AF+ A   YASHGSE G +Q+ILYG+VGFIP 
Sbjct: 61  LMMCAIDDILFHVRRIGPVLRMLIVGGIAFLLAGFNYASHGSEYGVLQWILYGLVGFIPA 120

Query: 121 VITSWLAHKYAEE 133
            ++SWL H++ EE
Sbjct: 121 TVSSWLVHRFVEE 133


>ref|YP_001220552.1| putative membrane/exported protein of unknown function
           [Bradyrhizobium sp. BTAi1]
 gb|ABQ39880.1| putative membrane/exported protein of unknown function
           [Bradyrhizobium sp. BTAi1]
          Length = 140

 Score =  176 bits (447), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 84/136 (61%), Positives = 102/136 (75%)

Query: 1   MKRYLIFAAIGPFIGGFLLLLMTTYQSGYWTETSGGEVTKLLVVFVKSLQYNYLFGIVPS 60
           MKRYLIFAA+GPF GG LLL  TT  SGYWT+T+  EV K  V F K+LQY+YLFG+VP+
Sbjct: 1   MKRYLIFAAVGPFFGGLLLLFATTVASGYWTDTNWSEVGKFFVTFAKTLQYSYLFGVVPA 60

Query: 61  LMFGAIDDILMHVRRIAPVVRMLVVGAVAFVGAALTYASHGSESGAVQFILYGMVGFIPG 120
           L  GAIDDIL+HVR+I P+VRML VGA  FV   L +   G +SG VQFIL+G+ GF+P 
Sbjct: 61  LTLGAIDDILLHVRKIGPLVRMLTVGAAGFVAGELLHGLRGPDSGVVQFILHGLSGFMPA 120

Query: 121 VITSWLAHKYAEELHA 136
           +I+SWLAHK +E   A
Sbjct: 121 MISSWLAHKDSESPQA 136


>ref|YP_570809.1| hypothetical protein RPD_3687 [Rhodopseudomonas palustris BisB5]
 gb|ABE40908.1| conserved hypothetical protein [Rhodopseudomonas palustris BisB5]
          Length = 144

 Score =  160 bits (406), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 74/144 (51%), Positives = 101/144 (70%), Gaps = 4/144 (2%)

Query: 1   MKRYLIFAAIGPFIGGFLLLLMTTYQSGYWTETSGGEVTKLLVVFVKSLQYNYLFGIVPS 60
           MKRYLIF A+ PF+GG LLL  T+Y SGYW  T+  EV K  +V  KSLQY+YLFG++P+
Sbjct: 1   MKRYLIFGALSPFVGGLLLLFTTSYLSGYWHHTNLMEVKKFFIVLFKSLQYSYLFGLLPA 60

Query: 61  LMFGAIDDILMHVRRIAPVVRMLVVGAVAFVGAALTYASHGSESGAVQFILYGMVGFIPG 120
           LM  AID+I+ H+ RI PVVRML+VG + F  AA  Y++ G++ G+ Q +LYG+VG +P 
Sbjct: 61  LMMAAIDEIICHIGRIGPVVRMLIVGIIGFAAAAFMYSNRGADMGSEQLVLYGLVGLVPA 120

Query: 121 VITSWLAHKYAEELHAPAQPASQH 144
           +++SWLA K+     AP  P +  
Sbjct: 121 MLSSWLAQKFC----APVAPKATE 140