BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0109.0035.p (336 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_772952.1| UDP-glucose 4-epimerase [Bradyrhizobium japonic... 541 e-152 ref|YP_780014.1| UDP-glucose 4-epimerase [Rhodopseudomonas palus... 447 e-123 ref|ZP_04680244.1| UDP-glucose 4-epimerase [Ochrobactrum interme... 445 e-123 ref|YP_001370694.1| UDP-glucose 4-epimerase [Ochrobactrum anthro... 445 e-123 ref|YP_284462.1| UDP-galactose 4-epimerase [Dechloromonas aromat... 443 e-122 >ref|NP_772952.1| UDP-glucose 4-epimerase [Bradyrhizobium japonicum USDA 110] dbj|BAC51577.1| UDP-glucose 4-epimerase [Bradyrhizobium japonicum USDA 110] Length = 355 Score = 541 bits (1394), Expect = e-152, Method: Compositional matrix adjust. Identities = 253/336 (75%), Positives = 291/336 (86%) Query: 1 MILLTGGAGYIGSHIAVALLDAGLDVVAVDNLSNSNSTSLERIRAICGRSVIFRHADIRN 60 MIL+TGGAGYIGSH+ +ALLDAG DVV VDNLSNSN SLER+++ICGRS++FRHADIRN Sbjct: 4 MILVTGGAGYIGSHVCIALLDAGFDVVVVDNLSNSNKASLERVQSICGRSLVFRHADIRN 63 Query: 61 EEAIYQILRAHDVTAVIHLAGLKAVGESSAQPMTYYDNNVVGTMRLVSAMTRAAVKTLVF 120 EE IY +LR VTAVIHLAGLKAVG+S+ +PM YY+NNV+GTMRL+SAM RA V TLVF Sbjct: 64 EELIYDMLRTCGVTAVIHLAGLKAVGDSNVRPMMYYENNVLGTMRLLSAMERANVTTLVF 123 Query: 121 SSSATVYGTPAYLPLDEKHPVAPINPYGRTKYFIEEILKDLHGSDKDWRIAILRYFNPVG 180 SSSATVYG P YLPLDEKHP+ P NPYGRTK IEE+LKDL S WRI LRYFNPVG Sbjct: 124 SSSATVYGMPQYLPLDEKHPLGPTNPYGRTKLVIEEMLKDLCRSHDGWRIGNLRYFNPVG 183 Query: 181 AHESGLIGEDPLDVPNNLLPIVAQVAIGRRPKVHVWGNDYDTPDGTGIRDYIHVVDLASG 240 AHESGL+GEDPL VP+NL+P VAQVAIGRR K+ +WGNDYDTPDGTGIRD+IHVVDLASG Sbjct: 184 AHESGLVGEDPLGVPSNLVPFVAQVAIGRREKLRIWGNDYDTPDGTGIRDFIHVVDLASG 243 Query: 241 HLSALSQLRQPGLLTVNLGTGSGSSVMDVIQTFKEVSGRPVPYVIDQRRVGDVAICYADP 300 HLSAL QLRQPGL+TVNLGTG+GSSV+D+++TF+ VSGR +PY I +RR GDVA CYADP Sbjct: 244 HLSALRQLRQPGLITVNLGTGNGSSVLDIVRTFESVSGRSIPYEIGERRAGDVAACYADP 303 Query: 301 TLAKNLLGWTSKRSLTQMCADHWHFQMKNPNGYRGA 336 T+AK+ LGW S RSL QMCADHW +Q++NPNGY+G Sbjct: 304 TVAKDALGWASTRSLEQMCADHWRWQLQNPNGYQGG 339 >ref|YP_780014.1| UDP-glucose 4-epimerase [Rhodopseudomonas palustris BisA53] gb|ABJ05034.1| UDP-galactose 4-epimerase [Rhodopseudomonas palustris BisA53] Length = 337 Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust. Identities = 212/333 (63%), Positives = 255/333 (76%) Query: 2 ILLTGGAGYIGSHIAVALLDAGLDVVAVDNLSNSNSTSLERIRAICGRSVIFRHADIRNE 61 IL+TGGAGYIGSH V LL+AG +VV VDNLSNSN +L+R+ ICGRS++F DIR+ Sbjct: 3 ILVTGGAGYIGSHTCVELLNAGHEVVVVDNLSNSNRVALDRVERICGRSLVFLEGDIRDR 62 Query: 62 EAIYQILRAHDVTAVIHLAGLKAVGESSAQPMTYYDNNVVGTMRLVSAMTRAAVKTLVFS 121 + +I+ H ++AV+H AGLKAVGES +P+ YYDNNV GT+ L+ AM VK +VFS Sbjct: 63 FLLKKIMLHHRISAVVHFAGLKAVGESVLKPIEYYDNNVGGTLCLLEAMKETGVKRIVFS 122 Query: 122 SSATVYGTPAYLPLDEKHPVAPINPYGRTKYFIEEILKDLHGSDKDWRIAILRYFNPVGA 181 SSATVYG P LPLDE HP++ NPYGR+K IE+IL+D H + DW +AILRYFNP GA Sbjct: 123 SSATVYGEPKKLPLDESHPLSATNPYGRSKLMIEDILRDHHTAMPDWSVAILRYFNPTGA 182 Query: 182 HESGLIGEDPLDVPNNLLPIVAQVAIGRRPKVHVWGNDYDTPDGTGIRDYIHVVDLASGH 241 HESGLIGE PL +PNNLLP VAQVA+GRR + VWGNDY TPDGTGIRDYIHVVDLA GH Sbjct: 183 HESGLIGESPLGIPNNLLPFVAQVAVGRREHLSVWGNDYPTPDGTGIRDYIHVVDLAIGH 242 Query: 242 LSALSQLRQPGLLTVNLGTGSGSSVMDVIQTFKEVSGRPVPYVIDQRRVGDVAICYADPT 301 + AL Q +P LLTVNLG+G+GSSV+DV++ F E SGR +P V RR GDVA CYAD T Sbjct: 243 VMALDQSHEPRLLTVNLGSGAGSSVLDVVKAFAEASGRDIPMVFAPRRAGDVASCYADTT 302 Query: 302 LAKNLLGWTSKRSLTQMCADHWHFQMKNPNGYR 334 A+ LGW ++R+L QMCADHW +Q NPNGY Sbjct: 303 AAEVRLGWKAQRNLAQMCADHWRWQHANPNGYE 335 >ref|ZP_04680244.1| UDP-glucose 4-epimerase [Ochrobactrum intermedium LMG 3301] gb|EEQ95750.1| UDP-glucose 4-epimerase [Ochrobactrum intermedium LMG 3301] Length = 335 Score = 445 bits (1144), Expect = e-123, Method: Compositional matrix adjust. Identities = 209/333 (62%), Positives = 253/333 (75%) Query: 2 ILLTGGAGYIGSHIAVALLDAGLDVVAVDNLSNSNSTSLERIRAICGRSVIFRHADIRNE 61 IL+TGGAGYIGSH V L++AG DVV VDN NS+ +L RI I GR+ DIR+ Sbjct: 3 ILVTGGAGYIGSHTCVQLIEAGHDVVVVDNFDNSHPEALHRIEQITGRTPRREAGDIRDR 62 Query: 62 EAIYQILRAHDVTAVIHLAGLKAVGESSAQPMTYYDNNVVGTMRLVSAMTRAAVKTLVFS 121 + Q++R H TAVIH AGLKAVGESS +PM YYD NVVGT+RL+ AM VKTLVFS Sbjct: 63 AFLEQVIRHHKCTAVIHFAGLKAVGESSEKPMLYYDCNVVGTLRLLQAMEATGVKTLVFS 122 Query: 122 SSATVYGTPAYLPLDEKHPVAPINPYGRTKYFIEEILKDLHGSDKDWRIAILRYFNPVGA 181 SSATVYG P LP+ E P+ NPYGRTK IE++L+D++ D WRIAILRYFNPVGA Sbjct: 123 SSATVYGDPQKLPITEDQPLTATNPYGRTKLVIEDMLRDIYNGDNSWRIAILRYFNPVGA 182 Query: 182 HESGLIGEDPLDVPNNLLPIVAQVAIGRRPKVHVWGNDYDTPDGTGIRDYIHVVDLASGH 241 HESGLIGEDP +PNNL+PI+AQVA GRR K++VWGNDY TPDGTG+RDYIHVVDLA+GH Sbjct: 183 HESGLIGEDPKGIPNNLMPIIAQVATGRREKLNVWGNDYPTPDGTGVRDYIHVVDLAAGH 242 Query: 242 LSALSQLRQPGLLTVNLGTGSGSSVMDVIQTFKEVSGRPVPYVIDQRRVGDVAICYADPT 301 L AL +L +P +VNLGTG G SV+DV++ F+ VS R + Y I RR GDVA CYADPT Sbjct: 243 LKALKKLDEPQCFSVNLGTGQGYSVLDVVKAFEHVSNREIKYEIAPRRPGDVAECYADPT 302 Query: 302 LAKNLLGWTSKRSLTQMCADHWHFQMKNPNGYR 334 A++ LGW+++++L +MC D WH+Q KNPNGY Sbjct: 303 FARDFLGWSAEKNLREMCQDMWHWQSKNPNGYE 335 >ref|YP_001370694.1| UDP-glucose 4-epimerase [Ochrobactrum anthropi ATCC 49188] gb|ABS14865.1| UDP-glucose 4-epimerase [Ochrobactrum anthropi ATCC 49188] Length = 335 Score = 445 bits (1144), Expect = e-123, Method: Compositional matrix adjust. Identities = 208/333 (62%), Positives = 253/333 (75%) Query: 2 ILLTGGAGYIGSHIAVALLDAGLDVVAVDNLSNSNSTSLERIRAICGRSVIFRHADIRNE 61 IL+TGGAGYIGSH V L++AG DVV VDN NS+ +L RI I GR+ DIR+ Sbjct: 3 ILVTGGAGYIGSHTCVQLIEAGHDVVVVDNFDNSHPEALHRIEKITGRTPRREAGDIRDR 62 Query: 62 EAIYQILRAHDVTAVIHLAGLKAVGESSAQPMTYYDNNVVGTMRLVSAMTRAAVKTLVFS 121 + Q++R H TAVIH AGLKAVGESS +PM YYD NVVGT+RL+ AM VKTLVFS Sbjct: 63 AFLEQVIRHHKCTAVIHFAGLKAVGESSEKPMLYYDCNVVGTLRLLQAMEATGVKTLVFS 122 Query: 122 SSATVYGTPAYLPLDEKHPVAPINPYGRTKYFIEEILKDLHGSDKDWRIAILRYFNPVGA 181 SSATVYG P LP+ E P++ NPYGRTK IE++L+D++ D W+IAILRYFNPVGA Sbjct: 123 SSATVYGDPQKLPITEDQPLSATNPYGRTKLVIEDMLRDIYNGDNSWKIAILRYFNPVGA 182 Query: 182 HESGLIGEDPLDVPNNLLPIVAQVAIGRRPKVHVWGNDYDTPDGTGIRDYIHVVDLASGH 241 HESGLIGEDP +PNNL+PI+AQVA GRR K++VWGNDY TPDGTG+RDYIHVVDLA+GH Sbjct: 183 HESGLIGEDPKGIPNNLMPIIAQVATGRREKLNVWGNDYSTPDGTGVRDYIHVVDLAAGH 242 Query: 242 LSALSQLRQPGLLTVNLGTGSGSSVMDVIQTFKEVSGRPVPYVIDQRRVGDVAICYADPT 301 L AL +L +P VNLGTG G SV+DV++ F+ VS R + Y I RR GDVA CYADPT Sbjct: 243 LKALKKLDEPQCFEVNLGTGQGYSVLDVVKAFEHVSNREIKYEIAPRRPGDVAECYADPT 302 Query: 302 LAKNLLGWTSKRSLTQMCADHWHFQMKNPNGYR 334 A++ LGW+++++L +MC D WH+Q KNPNGY Sbjct: 303 FARDFLGWSAEKNLREMCQDMWHWQSKNPNGYE 335 >ref|YP_284462.1| UDP-galactose 4-epimerase [Dechloromonas aromatica RCB] gb|AAZ45992.1| UDP-galactose 4-epimerase [Dechloromonas aromatica RCB] Length = 334 Score = 443 bits (1140), Expect = e-122, Method: Compositional matrix adjust. Identities = 204/334 (61%), Positives = 252/334 (75%) Query: 1 MILLTGGAGYIGSHIAVALLDAGLDVVAVDNLSNSNSTSLERIRAICGRSVIFRHADIRN 60 MIL+TGGAGYIGSH V LL++G DVV DN NS+ S++R+ AI G+ + DIR+ Sbjct: 1 MILVTGGAGYIGSHTCVELLNSGQDVVVFDNFCNSHPESIKRVEAITGKKIAVVKGDIRD 60 Query: 61 EEAIYQILRAHDVTAVIHLAGLKAVGESSAQPMTYYDNNVVGTMRLVSAMTRAAVKTLVF 120 + A+ LR +D +VIH AGLKAVGES +P+ YYDNNV+GT +L+ AM+ +KTLVF Sbjct: 61 QAAVEAALRQYDCQSVIHFAGLKAVGESVEKPLAYYDNNVIGTHKLLQAMSNCGIKTLVF 120 Query: 121 SSSATVYGTPAYLPLDEKHPVAPINPYGRTKYFIEEILKDLHGSDKDWRIAILRYFNPVG 180 SSSATVYG P +LPL E+HP++ NPYGRTK IE++L+DL+ SD WRI ILRYFNPVG Sbjct: 121 SSSATVYGEPQFLPLTEQHPLSGTNPYGRTKLVIEDMLRDLYRSDSSWRIGILRYFNPVG 180 Query: 181 AHESGLIGEDPLDVPNNLLPIVAQVAIGRRPKVHVWGNDYDTPDGTGIRDYIHVVDLASG 240 AHESGLIGEDP +PNNL+P VAQVA+GRR ++ VWGNDY TPDGTG+RDYIHVVDLA G Sbjct: 181 AHESGLIGEDPQGIPNNLMPFVAQVAVGRRERLSVWGNDYPTPDGTGVRDYIHVVDLAIG 240 Query: 241 HLSALSQLRQPGLLTVNLGTGSGSSVMDVIQTFKEVSGRPVPYVIDQRRVGDVAICYADP 300 HL AL+ L + VNLGTG+G SV+DVI+ F+ SGRP+PY + RR GDVA CYADP Sbjct: 241 HLKALACLSESRCFEVNLGTGTGCSVLDVIKAFESASGRPIPYELAPRRAGDVASCYADP 300 Query: 301 TLAKNLLGWTSKRSLTQMCADHWHFQMKNPNGYR 334 A LL W ++R+L MC D W +Q NPNG+R Sbjct: 301 AFAAELLQWRAERNLEVMCVDAWRWQSNNPNGFR 334