BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0109.0029.p (389 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_00999998.1| acyl-CoA dehydrogenase [Oceanicola batsensis ... 471 e-130 ref|NP_887131.1| acyl-CoA dehydrogenase [Bordetella bronchisepti... 464 e-128 ref|ZP_01037622.1| acyl-CoA dehydrogenase [Roseovarius sp. 217] ... 462 e-128 ref|YP_558248.1| putative acyl-CoA dehydrogenase, long- chain sp... 462 e-128 ref|YP_552022.1| acyl-CoA dehydrogenase-like [Polaromonas sp. JS... 461 e-128 >ref|ZP_00999998.1| acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597] gb|EAQ02469.1| acyl-CoA dehydrogenase [Oceanicola batsensis HTCC2597] Length = 388 Score = 471 bits (1211), Expect = e-130, Method: Compositional matrix adjust. Identities = 227/370 (61%), Positives = 282/370 (76%), Gaps = 1/370 (0%) Query: 19 EYELLRDQVRRFVKEEIKPCADQWEENGFIPRSILRRMGALGFFGIRYPAEYGGAEMDSV 78 + EL+R+Q+RRF++ E+ A+ WEE G +PR +LRRMG LG G+RY +YGGA +D + Sbjct: 17 DLELIRNQLRRFIEAEVIAKAEPWEEEGKVPRDVLRRMGDLGVLGMRYDEQYGGAGLDVM 76 Query: 79 ASTVFAEELGRSTYGGVADAMLVHADMASLYVFHDGTKAQRARWMPGIVSGEAITAVAIT 138 +S V AEE+GRST+GG + +LVH DMAS ++ + GT Q+ARWMP IVSGE ITAVA+T Sbjct: 77 SSVVLAEEVGRSTFGGFSATVLVHTDMASPHLENAGTPEQKARWMPSIVSGEMITAVAVT 136 Query: 139 EPDAGSDVKAIRTRAVRDGDSYVLDGTKLYITNGVHADLYCVAAKTDP-AAGTNGITMFL 197 EP AGSDV +RTRAV+DG +VL+GTK++ITNGVH DLY V AKTDP A G+ GITMF Sbjct: 137 EPGAGSDVAGMRTRAVQDGSDWVLNGTKMFITNGVHGDLYFVGAKTDPDAKGSRGITMFA 196 Query: 198 VEKGTPGFSVARELDKLGWRSSDTAELVFDGCRVPTENVLGAEGQGFYSIMRNLQNERLV 257 VEKGTPGFSV R L+K GW SDTAEL+F+ R+PTENVLG GFYS+M+N QNER+V Sbjct: 197 VEKGTPGFSVGRALNKTGWLCSDTAELIFEEVRIPTENVLGEVNHGFYSVMKNFQNERIV 256 Query: 258 LAAMSIGMAEAAIDMTVTYVKTRRAFGGVLWDMQAIRQRLAMLSARLEASRQFLYATAWR 317 L AM+ A+ A+D+TV YVK R+AFGG LWD QA+RQRLA R+ A RQ +Y A Sbjct: 257 LGAMACAEAQTALDITVDYVKQRKAFGGALWDKQAVRQRLADCQTRIVAGRQLVYHAAGL 316 Query: 318 MAADDDCLRETSMLKAICGELVNEVAYACVQFHGAMGVMRESAIERVARDARVLSIAGGA 377 AA DC++E SM+KA CGELVN V Y CVQFHG MG MRE+ +ER++RDARV +I GGA Sbjct: 317 DAAGRDCVKEVSMVKAYCGELVNSVLYDCVQFHGGMGYMRETPVERMSRDARVQAIGGGA 376 Query: 378 TEVMLEVVAS 387 +EVMLE VA Sbjct: 377 SEVMLEEVAK 386 >ref|NP_887131.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50] emb|CAE31081.1| acyl-CoA dehydrogenase [Bordetella bronchiseptica RB50] Length = 385 Score = 464 bits (1193), Expect = e-128, Method: Compositional matrix adjust. Identities = 223/383 (58%), Positives = 286/383 (74%), Gaps = 1/383 (0%) Query: 6 MSAREPELPWMAAEYELLRDQVRRFVKEEIKPCADQWEENGFIPRSILRRMGALGFFGIR 65 MS LP + E+ELLR QVRRFV+ E+ P A WE +G PR ++RRMG LG G+R Sbjct: 1 MSIETSNLPGLKEEHELLRSQVRRFVEREVIPHAQAWEHDGHTPRPVIRRMGELGMLGMR 60 Query: 66 YPAEYGGAEMDSVASTVFAEELGRSTYGGVADAMLVHADMASLYVFHDGTKAQRARWMPG 125 +P YGGA+ D+VAS VFAEELGRST+GG A +L D AS + GT Q+AR++P Sbjct: 61 FPESYGGADADTVASVVFAEELGRSTFGGFAITILTQTDTASPPIAAVGTPQQKARYLPA 120 Query: 126 IVSGEAITAVAITEPDAGSDVKAIRTRAVRDGDSYVLDGTKLYITNGVHADLYCVAAKTD 185 IV GE + A+A+TEPD GSD+ +RTRAVRDGD +VLDG K +ITNGVHADLY VAA+TD Sbjct: 121 IVRGECLVAIAMTEPDVGSDIATLRTRAVRDGDEWVLDGAKTFITNGVHADLYVVAARTD 180 Query: 186 PAA-GTNGITMFLVEKGTPGFSVARELDKLGWRSSDTAELVFDGCRVPTENVLGAEGQGF 244 +A + G+++FLV+KGTPG V R LDK+GW+SSDTA+L FDGCRVP +LG +GF Sbjct: 181 ASARPSQGVSLFLVDKGTPGLRVERRLDKMGWKSSDTAQLSFDGCRVPAGALLGEPNRGF 240 Query: 245 YSIMRNLQNERLVLAAMSIGMAEAAIDMTVTYVKTRRAFGGVLWDMQAIRQRLAMLSARL 304 ++MRN+QNERLVLAA ++G ++AAI T+ Y + R+AFG LWD QAIR RLAML+AR+ Sbjct: 241 AALMRNVQNERLVLAAQALGESQAAIAQTLDYTRLRKAFGATLWDKQAIRHRLAMLAARV 300 Query: 305 EASRQFLYATAWRMAADDDCLRETSMLKAICGELVNEVAYACVQFHGAMGVMRESAIERV 364 E++R F+Y+ A A +C++E SM+KA+CGELVNEV CVQFHGA G M+ +A+ER+ Sbjct: 301 ESARHFVYSVAALDARGVECVKEVSMIKALCGELVNEVMDDCVQFHGATGYMQGTAVERM 360 Query: 365 ARDARVLSIAGGATEVMLEVVAS 387 RDARV +I GGATE+MLE VA Sbjct: 361 YRDARVHAIGGGATEIMLEEVAK 383 >ref|ZP_01037622.1| acyl-CoA dehydrogenase [Roseovarius sp. 217] gb|EAQ23809.1| acyl-CoA dehydrogenase [Roseovarius sp. 217] Length = 388 Score = 462 bits (1189), Expect = e-128, Method: Compositional matrix adjust. Identities = 218/369 (59%), Positives = 281/369 (76%), Gaps = 1/369 (0%) Query: 19 EYELLRDQVRRFVKEEIKPCADQWEENGFIPRSILRRMGALGFFGIRYPAEYGGAEMDSV 78 + ++R Q+RRF++ E+ A+ WE++G +PR +LRRMG LG G+RY +YGG+ ++ + Sbjct: 17 DLNMIRAQLRRFIETEVTAKAEPWEKDGMVPRDVLRRMGDLGVLGMRYDEQYGGSGLNVM 76 Query: 79 ASTVFAEELGRSTYGGVADAMLVHADMASLYVFHDGTKAQRARWMPGIVSGEAITAVAIT 138 +S V AEE+GRST+GG + +LVH DMAS ++ + G+ Q+ARWMP I SGE I AVA+T Sbjct: 77 SSVVLAEEVGRSTFGGFSATVLVHTDMASPHLENAGSPEQKARWMPSITSGEKIAAVAVT 136 Query: 139 EPDAGSDVKAIRTRAVRDGDSYVLDGTKLYITNGVHADLYCVAAKTDP-AAGTNGITMFL 197 EP AGSDV +RTRAV+DG +V++GTK++ITNGVH D+Y V AKTDP A G+ GITMF Sbjct: 137 EPGAGSDVAGMRTRAVQDGSDWVINGTKMFITNGVHGDIYFVGAKTDPDAKGSRGITMFA 196 Query: 198 VEKGTPGFSVARELDKLGWRSSDTAELVFDGCRVPTENVLGAEGQGFYSIMRNLQNERLV 257 VEKGTPGFSV R L+K GW SDTAEL+F+ R+P ENVLG +GFYS+M+N QNER+V Sbjct: 197 VEKGTPGFSVGRALNKTGWLCSDTAELIFEDVRIPAENVLGEVNRGFYSVMKNFQNERIV 256 Query: 258 LAAMSIGMAEAAIDMTVTYVKTRRAFGGVLWDMQAIRQRLAMLSARLEASRQFLYATAWR 317 L AM+ A++A++MTV YVK R+AFGGVLWD Q +RQRLA R+EA RQ +Y A Sbjct: 257 LGAMACAEAQSALEMTVDYVKQRKAFGGVLWDKQTVRQRLADCQTRIEAGRQLIYHAASL 316 Query: 318 MAADDDCLRETSMLKAICGELVNEVAYACVQFHGAMGVMRESAIERVARDARVLSIAGGA 377 AA DC++E SM+KA CGELVN V Y CVQFHG MG MRE+ +ER++RDARV +I GGA Sbjct: 317 DAAGRDCVKEVSMVKAYCGELVNSVLYDCVQFHGGMGYMRETPVERMSRDARVQAIGGGA 376 Query: 378 TEVMLEVVA 386 TEVMLE VA Sbjct: 377 TEVMLEEVA 385 >ref|YP_558248.1| putative acyl-CoA dehydrogenase, long- chain specific [Burkholderia xenovorans LB400] gb|ABE30196.1| Putative acyl-CoA dehydrogenase, long- chain specific [Burkholderia xenovorans LB400] Length = 391 Score = 462 bits (1188), Expect = e-128, Method: Compositional matrix adjust. Identities = 223/375 (59%), Positives = 277/375 (73%), Gaps = 1/375 (0%) Query: 14 PWMAAEYELLRDQVRRFVKEEIKPCADQWEENGFIPRSILRRMGALGFFGIRYPAEYGGA 73 P+ + E+ +LRD +RRF+ +E+ P ADQWE NG++PR +LR+MG GF GIR +GGA Sbjct: 14 PYFSEEHSMLRDVIRRFIAKEVLPFADQWEINGYVPRELLRKMGEQGFLGIRQSEAFGGA 73 Query: 74 EMDSVASTVFAEELGRSTYGGVADAMLVHADMASLYVFHDGTKAQRARWMPGIVSGEAIT 133 M+ + + V AEELGRST+GG A +LVH DMAS ++ H G AQ R MP +V+G I Sbjct: 74 AMNVLGTVVLAEELGRSTFGGFAITVLVHTDMASPHLQHAGNPAQLERLMPDLVAGRKIA 133 Query: 134 AVAITEPDAGSDVKAIRTRAVRDGDSYVLDGTKLYITNGVHADLYCVAAKTD-PAAGTNG 192 AVA+TE AGSD+ ++RT A DGD YVL+G K++ITNGVH D+Y VAAKT P G Sbjct: 134 AVAMTEAGAGSDLASMRTTARLDGDHYVLNGAKMFITNGVHGDIYFVAAKTGGPGRSHGG 193 Query: 193 ITMFLVEKGTPGFSVARELDKLGWRSSDTAELVFDGCRVPTENVLGAEGQGFYSIMRNLQ 252 I+MF+VEKG PGFSVAR L K GW SSDTAELVFD CRVP +N+LG E +GFYS++RNLQ Sbjct: 194 ISMFIVEKGMPGFSVARPLSKQGWLSSDTAELVFDECRVPVQNLLGEENKGFYSLVRNLQ 253 Query: 253 NERLVLAAMSIGMAEAAIDMTVTYVKTRRAFGGVLWDMQAIRQRLAMLSARLEASRQFLY 312 NER+ L A ++G A AI++T+ YV R AFG LW+ QAIRQ++AML A++EA+RQ LY Sbjct: 254 NERITLGAQALGEASRAIEITLDYVTQRTAFGQTLWEKQAIRQKMAMLLAKVEAARQLLY 313 Query: 313 ATAWRMAADDDCLRETSMLKAICGELVNEVAYACVQFHGAMGVMRESAIERVARDARVLS 372 TAWR A + E SM+KA+CGELVNEV YAC QFHG G MRE+ IER+ RDARV S Sbjct: 314 NTAWRDAQGQTVVAEVSMIKALCGELVNEVMYACQQFHGGFGYMREAPIERMVRDARVQS 373 Query: 373 IAGGATEVMLEVVAS 387 I GGATEVMLE VA Sbjct: 374 IGGGATEVMLEEVAK 388 >ref|YP_552022.1| acyl-CoA dehydrogenase-like [Polaromonas sp. JS666] gb|ABE47124.1| acyl-CoA dehydrogenase-like [Polaromonas sp. JS666] Length = 381 Score = 461 bits (1186), Expect = e-128, Method: Compositional matrix adjust. Identities = 215/370 (58%), Positives = 283/370 (76%), Gaps = 1/370 (0%) Query: 19 EYELLRDQVRRFVKEEIKPCADQWEENGFIPRSILRRMGALGFFGIRYPAEYGGAEMDSV 78 ++ RD +RRFV++E+ P A WEE G +PR++LR+MG LG+ GIRY +YGG+++D+V Sbjct: 10 QHRQFRDNLRRFVEQEVVPQAAPWEEQGMVPRAVLRKMGELGYLGIRYDEQYGGSKLDTV 69 Query: 79 ASTVFAEELGRSTYGGVADAMLVHADMASLYVFHDGTKAQRARWMPGIVSGEAITAVAIT 138 S + AEELGRST+GG A ++VH DMAS ++ + G+ Q R++P I+ GE I AVA+T Sbjct: 70 YSAILAEELGRSTFGGFAVTVMVHTDMASPHLANFGSPEQLQRYLPPIIRGEKICAVAVT 129 Query: 139 EPDAGSDVKAIRTRAVRDGDSYVLDGTKLYITNGVHADLYCVAAKTDPAA-GTNGITMFL 197 EPDAGSDV IRTRAVR+GD +V++G+K++ITNGV D+Y VAAKTDP A G+ GI++F+ Sbjct: 130 EPDAGSDVAGIRTRAVREGDEWVINGSKMFITNGVQGDVYFVAAKTDPTAKGSRGISIFI 189 Query: 198 VEKGTPGFSVARELDKLGWRSSDTAELVFDGCRVPTENVLGAEGQGFYSIMRNLQNERLV 257 VEKGTPGF V R L+K GW SDTAELVF+ CR+P N+LG E +GFY IMRN QNER+V Sbjct: 190 VEKGTPGFRVGRALNKSGWLCSDTAELVFENCRIPAANLLGEENKGFYQIMRNFQNERMV 249 Query: 258 LAAMSIGMAEAAIDMTVTYVKTRRAFGGVLWDMQAIRQRLAMLSARLEASRQFLYATAWR 317 L A ++G A AI++T+ YV+ R+AFG LWD QAIRQRLAM ++++ A+RQ +Y AW Sbjct: 250 LGAQTMGEAARAIELTLDYVRERKAFGATLWDKQAIRQRLAMRASQVAAARQLVYHAAWL 309 Query: 318 MAADDDCLRETSMLKAICGELVNEVAYACVQFHGAMGVMRESAIERVARDARVLSIAGGA 377 A +C++E SM+KA+CG LVN+V Y C QFHG G MRE+AIER+ RDARV +I GGA Sbjct: 310 DAQGRECVKEVSMVKALCGNLVNDVVYDCQQFHGGFGYMREAAIERMVRDARVQAIGGGA 369 Query: 378 TEVMLEVVAS 387 TEVMLE VA Sbjct: 370 TEVMLEEVAK 379