BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0109.0004.p (468 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_766964.1| sugar transport protein [Bradyrhizobium japonic... 573 e-161 ref|YP_001236760.1| major facilitator transporter [Bradyrhizobiu... 561 e-158 ref|YP_001208756.1| major facilitator superfamily (MFS) transpor... 560 e-157 ref|YP_001994106.1| major facilitator superfamily protein [Rhodo... 552 e-155 ref|NP_949996.1| major facilitator transporter [Rhodopseudomonas... 550 e-154 >ref|NP_766964.1| sugar transport protein [Bradyrhizobium japonicum USDA 110] dbj|BAC45589.1| bll0324 [Bradyrhizobium japonicum USDA 110] Length = 517 Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust. Identities = 285/361 (78%), Positives = 320/361 (88%), Gaps = 8/361 (2%) Query: 108 MTVQPTQ-LSSATTQQAVAPVTPDDDRIIETSIPVRLDNLSWSRFHTRVVLALGITWILD 166 M +Q +Q L+ AVA DRIIETSIP RLD L WS FHTRVVLALGITWILD Sbjct: 24 MELQQSQALNYGPAVSAVA-----TDRIIETSIPSRLDALPWSGFHTRVVLALGITWILD 78 Query: 167 GLEVTLAGALSGALKDSPTMSFSNADVGLASSAYLAGAVLGALGFGWLTDRIGRKKLFFI 226 GLEVTLAGALSGALK SP++ FSN D+G+A+SAYLAGAVLGALGFGWLTDRIGRKKLFFI Sbjct: 79 GLEVTLAGALSGALKQSPSLQFSNLDLGIANSAYLAGAVLGALGFGWLTDRIGRKKLFFI 138 Query: 227 TLALYLSATAATALSWNVASYALFRFLTGAGIGGEYTAINSTIQELVPARYRGWTDLVIN 286 TLALYLSATAATALSW++ASYALFRFLTGAGIGGEYTAINSTIQELVPARYRGWTDLVIN Sbjct: 139 TLALYLSATAATALSWDIASYALFRFLTGAGIGGEYTAINSTIQELVPARYRGWTDLVIN 198 Query: 287 GSFWIGAAIGALSAIILLDPAFLAPDHGWRIAYFTGAVLGLVVLLMRMWIPESPRWLMIH 346 GSFWIGAA+GA++AI+LLDPA + PD GWR+AY GA +GLVVLLMRMWIPESPRWLMIH Sbjct: 199 GSFWIGAAMGAVAAIVLLDPALIGPDLGWRLAYLIGASIGLVVLLMRMWIPESPRWLMIH 258 Query: 347 GRPEEAHKIVADIETSVLGHEQPSAD--FEKIRLRMRDHTPLREVAVTLFSTYRQRSLVG 404 GRP++AH IV +IE SV+GH+Q ++D F +IRL+MRDHTP+REV TLF+ YRQR+LVG Sbjct: 259 GRPDQAHAIVDEIERSVIGHDQDASDRRFTRIRLKMRDHTPIREVMHTLFTVYRQRALVG 318 Query: 405 LTLMAAQAFFYNAIFFTFALILTDFFGVAASNVGWYILPFAAGNFLGPLLLGRLFDTLGR 464 L LM AQAFFYNAIFFTFAL+LTDF+G++A +VGWY+LPFAAGNFLGPLLLGRLFDTLGR Sbjct: 319 LVLMGAQAFFYNAIFFTFALVLTDFYGISADHVGWYLLPFAAGNFLGPLLLGRLFDTLGR 378 Query: 465 R 465 R Sbjct: 379 R 379 >ref|YP_001236760.1| major facilitator transporter [Bradyrhizobium sp. BTAi1] gb|ABQ32854.1| putative Major Facilitator Superfamily (MFS) transporter [Bradyrhizobium sp. BTAi1] Length = 504 Score = 561 bits (1446), Expect = e-158, Method: Compositional matrix adjust. Identities = 281/353 (79%), Positives = 306/353 (86%), Gaps = 2/353 (0%) Query: 115 LSSATTQQAVAPVTPDDDRIIETSIPVRLDNLSWSRFHTRVVLALGITWILDGLEVTLAG 174 ++ A VA P+ DRIIET+IP RLD+L WS FHTRVVLALGITW+LDGLEVTLAG Sbjct: 14 VTPAPQSAGVARELPEHDRIIETNIPARLDDLRWSGFHTRVVLALGITWVLDGLEVTLAG 73 Query: 175 ALSGALKDSPTMSFSNADVGLASSAYLAGAVLGALGFGWLTDRIGRKKLFFITLALYLSA 234 ALSGALK SP + FSN D+GLA+SAYLAGAVLGALGFGWLTDRIGR+KLFFITLALYLSA Sbjct: 74 ALSGALKQSPVLHFSNLDIGLANSAYLAGAVLGALGFGWLTDRIGRRKLFFITLALYLSA 133 Query: 235 TAATALSWNVASYALFRFLTGAGIGGEYTAINSTIQELVPARYRGWTDLVINGSFWIGAA 294 TAATALSWNVA YALFRFLTGAGIGGEYTAINSTIQELVPARYRGWTDL+INGSFW+GAA Sbjct: 134 TAATALSWNVAVYALFRFLTGAGIGGEYTAINSTIQELVPARYRGWTDLMINGSFWLGAA 193 Query: 295 IGALSAIILLDPAFLAPDHGWRIAYFTGAVLGLVVLLMRMWIPESPRWLMIHGRPEEAHK 354 +GA+ AI+LLDP + D GWR+AY GA LGLVVL+MRMWIPESPRWLMIHG PE+AH Sbjct: 194 LGAVGAIVLLDPEVASADMGWRLAYGIGAGLGLVVLIMRMWIPESPRWLMIHGHPEQAHD 253 Query: 355 IVADIETSVLGH--EQPSADFEKIRLRMRDHTPLREVAVTLFSTYRQRSLVGLTLMAAQA 412 IVA IE V GH E+ + KIRLRMRDHTPL EVA TLFS YRQRSLVGLTLM AQA Sbjct: 254 IVAAIERDVTGHDREERAKSLPKIRLRMRDHTPLLEVARTLFSVYRQRSLVGLTLMIAQA 313 Query: 413 FFYNAIFFTFALILTDFFGVAASNVGWYILPFAAGNFLGPLLLGRLFDTLGRR 465 FFYNAIFFTFAL+LTDF+G+ A +VGWYILPFAAGN LGPLLLGRLFDTLGRR Sbjct: 314 FFYNAIFFTFALVLTDFYGIQADHVGWYILPFAAGNVLGPLLLGRLFDTLGRR 366 >ref|YP_001208756.1| major facilitator superfamily (MFS) transporter/sugar transporter [Bradyrhizobium sp. ORS 278] emb|CAL80541.1| putative Major Facilitator Superfamily (MFS) transporter; putative sugar transporter [Bradyrhizobium sp. ORS 278] Length = 504 Score = 560 bits (1443), Expect = e-157, Method: Compositional matrix adjust. Identities = 279/352 (79%), Positives = 307/352 (87%), Gaps = 3/352 (0%) Query: 117 SATTQQAVAPVTPD-DDRIIETSIPVRLDNLSWSRFHTRVVLALGITWILDGLEVTLAGA 175 ++T Q + P DD IIET+IP RLD+L WS FHTRVVLALGITW+LDGLEVTLAGA Sbjct: 15 TSTPQSSETAREPSRDDNIIETNIPARLDDLRWSAFHTRVVLALGITWVLDGLEVTLAGA 74 Query: 176 LSGALKDSPTMSFSNADVGLASSAYLAGAVLGALGFGWLTDRIGRKKLFFITLALYLSAT 235 LSGALK SP++ FSN D+GLA+SAYLAGAVLGALGFGWLTDRIGR+KLFFITLALYLSAT Sbjct: 75 LSGALKQSPSLHFSNLDIGLANSAYLAGAVLGALGFGWLTDRIGRRKLFFITLALYLSAT 134 Query: 236 AATALSWNVASYALFRFLTGAGIGGEYTAINSTIQELVPARYRGWTDLVINGSFWIGAAI 295 AATALSWNVA+YALFRFLTGAGIGGEYTAINSTIQELVPARYRGWTDL+INGSFW+GAA+ Sbjct: 135 AATALSWNVATYALFRFLTGAGIGGEYTAINSTIQELVPARYRGWTDLMINGSFWLGAAL 194 Query: 296 GALSAIILLDPAFLAPDHGWRIAYFTGAVLGLVVLLMRMWIPESPRWLMIHGRPEEAHKI 355 GA+ AI+LLDPAF PD GWR+AY GA LGLVVL+MRMWIPESPRWLMIHG PE+AH I Sbjct: 195 GAVGAIVLLDPAFAGPDVGWRLAYGIGACLGLVVLIMRMWIPESPRWLMIHGHPEQAHDI 254 Query: 356 VADIETSVLGH--EQPSADFEKIRLRMRDHTPLREVAVTLFSTYRQRSLVGLTLMAAQAF 413 V IE V GH E + K++LRMRDHTPL EVA TLFS YRQRSLVGLTLM AQAF Sbjct: 255 VVAIERDVTGHDREARAKALPKMKLRMRDHTPLGEVARTLFSVYRQRSLVGLTLMIAQAF 314 Query: 414 FYNAIFFTFALILTDFFGVAASNVGWYILPFAAGNFLGPLLLGRLFDTLGRR 465 FYNAIFFTFAL+LTDF+G+ + +VGWYILPFAAGN LGPLLLGRLFDTLGRR Sbjct: 315 FYNAIFFTFALVLTDFYGIKSDHVGWYILPFAAGNVLGPLLLGRLFDTLGRR 366 >ref|YP_001994106.1| major facilitator superfamily protein [Rhodopseudomonas palustris TIE-1] gb|ACF03631.1| major facilitator superfamily MFS_1 [Rhodopseudomonas palustris TIE-1] Length = 495 Score = 552 bits (1422), Expect = e-155, Method: Compositional matrix adjust. Identities = 279/355 (78%), Positives = 302/355 (85%), Gaps = 11/355 (3%) Query: 111 QPTQLSSATTQQAVAPVTPDDDRIIETSIPVRLDNLSWSRFHTRVVLALGITWILDGLEV 170 +P Q+ ATT R+I+T IP RLD L WSRFHTRVV ALGITWILDGLEV Sbjct: 11 EPPQVPPATT-----------GRVIDTDIPARLDGLLWSRFHTRVVAALGITWILDGLEV 59 Query: 171 TLAGALSGALKDSPTMSFSNADVGLASSAYLAGAVLGALGFGWLTDRIGRKKLFFITLAL 230 TLAGAL+GALKDSP++ FSN DVGLA+SAYLAGAV+GALGFGWLTDRIGRKKLFFITLAL Sbjct: 60 TLAGALAGALKDSPSLRFSNLDVGLANSAYLAGAVIGALGFGWLTDRIGRKKLFFITLAL 119 Query: 231 YLSATAATALSWNVASYALFRFLTGAGIGGEYTAINSTIQELVPARYRGWTDLVINGSFW 290 YL+ATAATALSW+V SYALFRFLTGAGIGGEYTAINSTIQELVPARYRGWTDLVINGSFW Sbjct: 120 YLTATAATALSWSVTSYALFRFLTGAGIGGEYTAINSTIQELVPARYRGWTDLVINGSFW 179 Query: 291 IGAAIGALSAIILLDPAFLAPDHGWRIAYFTGAVLGLVVLLMRMWIPESPRWLMIHGRPE 350 IGAAIGA+ AI+LLDPA + PDHGWR+AY TGA +GLVV MR WIPESPRWLMIHG+PE Sbjct: 180 IGAAIGAVCAIVLLDPAVIDPDHGWRLAYLTGAAIGLVVFAMRWWIPESPRWLMIHGQPE 239 Query: 351 EAHKIVADIETSVLGHEQPSADFEKIRLRMRDHTPLREVAVTLFSTYRQRSLVGLTLMAA 410 A IVADIE S KI+LRMR HTPL EVA TLF TYRQRSLVGL LM A Sbjct: 240 RAEAIVADIEQSARHAPDRPRVLPKIKLRMRTHTPLLEVAKTLFGTYRQRSLVGLVLMTA 299 Query: 411 QAFFYNAIFFTFALILTDFFGVAASNVGWYILPFAAGNFLGPLLLGRLFDTLGRR 465 QAFFYNAIFFT+ALILTDFFG++A++VGWYILPFAAGNFLGPLLLGRLFDTLGRR Sbjct: 300 QAFFYNAIFFTYALILTDFFGISANHVGWYILPFAAGNFLGPLLLGRLFDTLGRR 354 >ref|NP_949996.1| major facilitator transporter [Rhodopseudomonas palustris CGA009] emb|CAE30102.1| putative suar transport protein [Rhodopseudomonas palustris CGA009] Length = 495 Score = 550 bits (1417), Expect = e-154, Method: Compositional matrix adjust. Identities = 278/352 (78%), Positives = 302/352 (85%), Gaps = 1/352 (0%) Query: 114 QLSSATTQQAVAPVTPDDDRIIETSIPVRLDNLSWSRFHTRVVLALGITWILDGLEVTLA 173 +S+A T+ P R+I+T IP RLD L WSRFHTRVV ALGITWILDGLEVTLA Sbjct: 4 SVSAAITEPPQVP-PAATGRVIDTDIPARLDGLLWSRFHTRVVAALGITWILDGLEVTLA 62 Query: 174 GALSGALKDSPTMSFSNADVGLASSAYLAGAVLGALGFGWLTDRIGRKKLFFITLALYLS 233 GAL+GALKDSP++ FSN DVGLA+SAYLAGAV+GALGFGWLTDRIGRKKLFFITLALYL+ Sbjct: 63 GALAGALKDSPSLRFSNLDVGLANSAYLAGAVIGALGFGWLTDRIGRKKLFFITLALYLT 122 Query: 234 ATAATALSWNVASYALFRFLTGAGIGGEYTAINSTIQELVPARYRGWTDLVINGSFWIGA 293 ATAATALSW+V SYALFR LTGAGIGGEYTAINSTIQELVPARYRGWTDLVINGSFWIGA Sbjct: 123 ATAATALSWSVTSYALFRLLTGAGIGGEYTAINSTIQELVPARYRGWTDLVINGSFWIGA 182 Query: 294 AIGALSAIILLDPAFLAPDHGWRIAYFTGAVLGLVVLLMRMWIPESPRWLMIHGRPEEAH 353 AIGA+ AI+LLDPA + PDHGWR+AY TGAV+GLVV MR WIPESPRWLMIHG+PE A Sbjct: 183 AIGAVCAIVLLDPAVIDPDHGWRLAYLTGAVIGLVVFAMRWWIPESPRWLMIHGQPERAE 242 Query: 354 KIVADIETSVLGHEQPSADFEKIRLRMRDHTPLREVAVTLFSTYRQRSLVGLTLMAAQAF 413 IVADIE S KI+LRMR HTPL EVA TLF TYRQRSLVGL LM AQAF Sbjct: 243 AIVADIEQSARHAPDRPRVLPKIKLRMRTHTPLLEVAKTLFGTYRQRSLVGLVLMTAQAF 302 Query: 414 FYNAIFFTFALILTDFFGVAASNVGWYILPFAAGNFLGPLLLGRLFDTLGRR 465 FYNAIFFT+ALILTDFFG++A++VGWYILPFAAGNFLGPLLLGRLFDTLGRR Sbjct: 303 FYNAIFFTYALILTDFFGISANHVGWYILPFAAGNFLGPLLLGRLFDTLGRR 354