BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0108.0004.p (444 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_770938.1| C4-dicarboxylate transport protein [Bradyrhizob... 801 0.0 ref|NP_770363.1| C4-dicarboxylate transport protein [Bradyrhizob... 697 0.0 ref|YP_001204370.1| C4-dicarboxylate transport protein [Bradyrhi... 695 0.0 ref|YP_532726.1| sodium:dicarboxylate symporter [Rhodopseudomona... 682 0.0 ref|YP_001205518.1| C4-dicarboxylate transport protein [Bradyrhi... 674 0.0 >ref|NP_770938.1| C4-dicarboxylate transport protein [Bradyrhizobium japonicum USDA 110] sp|Q89M95.1|DCTA3_BRAJA RecName: Full=C4-dicarboxylate transport protein 3 dbj|BAC49563.1| C4-dicarboxylate transport protein [Bradyrhizobium japonicum USDA 110] Length = 444 Score = 801 bits (2070), Expect = 0.0, Method: Compositional matrix adjust. Identities = 409/444 (92%), Positives = 425/444 (95%) Query: 1 MATATVVTAAPASAGSKPWYKVLYVQVLIAIVLGALVGWLWPGLATNEWIKALGDGFIKL 60 M T T+ A A +KPWYKVLYVQVLIAIVLGA+VGWLWP +ATN+WIKALGDGFIKL Sbjct: 1 MTTTTMAGTPVAPAAAKPWYKVLYVQVLIAIVLGAIVGWLWPTVATNDWIKALGDGFIKL 60 Query: 61 IKMVIAPIIFCTVVSGIAHIQDAKKVGRIGVKALVYFEVVSTFALVIGLLVGNLVRPGAG 120 IKMVIAPIIFCTVVSGIAHIQDAKKVGRIGVKALVYFEVVSTFALVIGL++GNLVRPGAG Sbjct: 61 IKMVIAPIIFCTVVSGIAHIQDAKKVGRIGVKALVYFEVVSTFALVIGLIIGNLVRPGAG 120 Query: 121 FGNAAANAQAVAGYAKQAEAQKSVDFVLHIIPDTVVGAFAQGEILQVLLFSVLFGFAIMG 180 FGNAAAN AVA YAKQA QKSVDFVLHIIPDTVVGAFAQGEILQVLLFSVLFGFAIM Sbjct: 121 FGNAAANEAAVATYAKQAAGQKSVDFVLHIIPDTVVGAFAQGEILQVLLFSVLFGFAIMS 180 Query: 181 LGERGHTIRSFIDDAAHAVFGVISIVMRAAPIGAFGAMAFTIGKFGTGAILNLMGLIATF 240 LGERGHTIRSFIDDAAHAVFGVISIVMRAAPIGAFGAMA+TIGKFGTGAILNL+GLIATF Sbjct: 181 LGERGHTIRSFIDDAAHAVFGVISIVMRAAPIGAFGAMAYTIGKFGTGAILNLIGLIATF 240 Query: 241 YLTAALFVFGVLGIIARVAGFSIFKFLAYIKDELLIVLGTSSSESALPSLMEKLERLGCS 300 Y+TAALFVF VLGIIAR+AGFSIFKFLAYIKDELLIVLGTSSSESALPSLMEKLERLGCS Sbjct: 241 YVTAALFVFVVLGIIARLAGFSIFKFLAYIKDELLIVLGTSSSESALPSLMEKLERLGCS 300 Query: 301 KSVVGLVVPTGYSFNLDGTNIYMTLATLFIAQALGFDLTFSQQITILIVAMLTSKGASGI 360 KSVVGLVVPTGYSFNLDGTNIYMTLATLFIAQALGFDL+F QQ+TIL+VAMLTSKGASGI Sbjct: 301 KSVVGLVVPTGYSFNLDGTNIYMTLATLFIAQALGFDLSFGQQLTILVVAMLTSKGASGI 360 Query: 361 TGAGFITLAATLAVVDPRLVPGMAIVLGIDKFMSECRALTNLCGNGVACVIVAWWEGELD 420 TGAGFITLAATLAVVDPRLVPGMAIVLGIDKFMSECRALTNLCGNGVACVIVAWWEGELD Sbjct: 361 TGAGFITLAATLAVVDPRLVPGMAIVLGIDKFMSECRALTNLCGNGVACVIVAWWEGELD 420 Query: 421 RDKLNANLARQIDPTDMETALTTD 444 RDKLNA L+RQIDPTDMETA+TTD Sbjct: 421 RDKLNAGLSRQIDPTDMETAITTD 444 >ref|NP_770363.1| C4-dicarboxylate transport protein [Bradyrhizobium japonicum USDA 110] sp|Q89NW0.1|DCTA2_BRAJA RecName: Full=C4-dicarboxylate transport protein 2 dbj|BAC48988.1| C4-dicarboxylate transport protein [Bradyrhizobium japonicum USDA 110] Length = 444 Score = 697 bits (1799), Expect = 0.0, Method: Compositional matrix adjust. Identities = 341/428 (79%), Positives = 381/428 (89%), Gaps = 1/428 (0%) Query: 16 SKPWYKVLYVQVLIAIVLGALVGWLWPGLATNEWIKALGDGFIKLIKMVIAPIIFCTVVS 75 KP+Y++LYVQVL AIVLG +VGWLWP + N+WIKA+GDGF+KLIKM IAPIIFCTVVS Sbjct: 17 KKPFYRILYVQVLAAIVLGVIVGWLWPDIGKNDWIKAMGDGFVKLIKMAIAPIIFCTVVS 76 Query: 76 GIAHIQDAKKVGRIGVKALVYFEVVSTFALVIGLLVGNLVRPGAGFGNAAANAQAVAGYA 135 GIAHI + KKVGR+ VKALVYFEVVSTFAL +GL+V N++RPGAGF +NA AVAGYA Sbjct: 77 GIAHISEVKKVGRVAVKALVYFEVVSTFALALGLVVANVLRPGAGF-QGQSNAAAVAGYA 135 Query: 136 KQAEAQKSVDFVLHIIPDTVVGAFAQGEILQVLLFSVLFGFAIMGLGERGHTIRSFIDDA 195 KQA KSVDFVLHIIPDTVVGAFAQGEILQVLLF++LFGFA+MGLGER HT+RSF+DD Sbjct: 136 KQASEMKSVDFVLHIIPDTVVGAFAQGEILQVLLFAILFGFALMGLGERAHTVRSFVDDV 195 Query: 196 AHAVFGVISIVMRAAPIGAFGAMAFTIGKFGTGAILNLMGLIATFYLTAALFVFGVLGII 255 AHA+FGVISIV++ APIGAFGAMA+TIG++G A+ NL GLIATFYLTA LFV LGII Sbjct: 196 AHAMFGVISIVVKVAPIGAFGAMAYTIGRYGPQALGNLAGLIATFYLTAFLFVVVGLGII 255 Query: 256 ARVAGFSIFKFLAYIKDELLIVLGTSSSESALPSLMEKLERLGCSKSVVGLVVPTGYSFN 315 AR+AGFSIFKFL YIKDELLIVLGTSSSESALP +MEKLE LGCSKSVVGLVVPTGYSFN Sbjct: 256 ARIAGFSIFKFLKYIKDELLIVLGTSSSESALPQMMEKLEILGCSKSVVGLVVPTGYSFN 315 Query: 316 LDGTNIYMTLATLFIAQALGFDLTFSQQITILIVAMLTSKGASGITGAGFITLAATLAVV 375 LDGTNIYMTLATLFIAQA+ DL+F +Q+TIL+VAMLTSKGASGITGAGFITLA TLA V Sbjct: 316 LDGTNIYMTLATLFIAQAMNVDLSFGEQMTILVVAMLTSKGASGITGAGFITLAGTLAAV 375 Query: 376 DPRLVPGMAIVLGIDKFMSECRALTNLCGNGVACVIVAWWEGELDRDKLNANLARQIDPT 435 P L+PGMAIVLGIDKFMSECRALTNLCGNGVACV+VAWWEGELDR+KL L R +DPT Sbjct: 376 RPELLPGMAIVLGIDKFMSECRALTNLCGNGVACVVVAWWEGELDREKLRVALDRNVDPT 435 Query: 436 DMETALTT 443 D+E A+TT Sbjct: 436 DLEVAVTT 443 >ref|YP_001204370.1| C4-dicarboxylate transport protein [Bradyrhizobium sp. ORS 278] sp|A4YQF7.1|DCTA1_BRASO RecName: Full=C4-dicarboxylate transport protein 1 emb|CAL76133.1| C4-dicarboxylate transport protein [Bradyrhizobium sp. ORS 278] Length = 439 Score = 695 bits (1794), Expect = 0.0, Method: Compositional matrix adjust. Identities = 339/425 (79%), Positives = 380/425 (89%), Gaps = 1/425 (0%) Query: 19 WYKVLYVQVLIAIVLGALVGWLWPGLATNEWIKALGDGFIKLIKMVIAPIIFCTVVSGIA 78 +Y+VLY+QVL+AIVLG +VGWLWP + N+WIKALGDGF+KLIKMVIAP+IFCTVVSGIA Sbjct: 15 FYRVLYIQVLVAIVLGVIVGWLWPEIGKNDWIKALGDGFVKLIKMVIAPVIFCTVVSGIA 74 Query: 79 HIQDAKKVGRIGVKALVYFEVVSTFALVIGLLVGNLVRPGAGFGNAAANAQAVAGYAKQA 138 H+ + KKVGR+ +KAL+YFE+VSTFAL +GL+V N+++PGAGF NA AVA YAKQA Sbjct: 75 HVSEVKKVGRVAIKALIYFEIVSTFALALGLIVANVIQPGAGF-QGQTNAAAVANYAKQA 133 Query: 139 EAQKSVDFVLHIIPDTVVGAFAQGEILQVLLFSVLFGFAIMGLGERGHTIRSFIDDAAHA 198 KSVDFVLHIIPDTVVGAFAQGEILQVLLFS+LFG A+M LGERGHT+R+F+DDAAHA Sbjct: 134 SEMKSVDFVLHIIPDTVVGAFAQGEILQVLLFSILFGIALMSLGERGHTMRAFVDDAAHA 193 Query: 199 VFGVISIVMRAAPIGAFGAMAFTIGKFGTGAILNLMGLIATFYLTAALFVFGVLGIIARV 258 +FGVI+IV++AAPIGAFGAMAFTIG++G A+ NL GLIATFYLTA FV VLGIIAR+ Sbjct: 194 IFGVIAIVVKAAPIGAFGAMAFTIGRYGPQALGNLAGLIATFYLTALAFVIIVLGIIARI 253 Query: 259 AGFSIFKFLAYIKDELLIVLGTSSSESALPSLMEKLERLGCSKSVVGLVVPTGYSFNLDG 318 AGFSIFKFL YIKDELLIVLGTSSSESALP +MEKLERLGCSK VVGLVVPTGYSFNLDG Sbjct: 254 AGFSIFKFLTYIKDELLIVLGTSSSESALPQMMEKLERLGCSKPVVGLVVPTGYSFNLDG 313 Query: 319 TNIYMTLATLFIAQALGFDLTFSQQITILIVAMLTSKGASGITGAGFITLAATLAVVDPR 378 TNIYMTLATLFIAQA+ L+F +QITIL+VAMLTSKGASGITGAGFITLA TLA V P Sbjct: 314 TNIYMTLATLFIAQAMNVHLSFGEQITILLVAMLTSKGASGITGAGFITLAGTLAAVRPE 373 Query: 379 LVPGMAIVLGIDKFMSECRALTNLCGNGVACVIVAWWEGELDRDKLNANLARQIDPTDME 438 LVPGMAIVLGIDKFMSECRALTNLCGNGVACVIVAWWEGELDRDKL A L R IDP+D+E Sbjct: 374 LVPGMAIVLGIDKFMSECRALTNLCGNGVACVIVAWWEGELDRDKLRAALDRDIDPSDVE 433 Query: 439 TALTT 443 A+TT Sbjct: 434 VAVTT 438 >ref|YP_532726.1| sodium:dicarboxylate symporter [Rhodopseudomonas palustris BisB18] sp|Q213M9.1|DCTA_RHOPB RecName: Full=C4-dicarboxylate transport protein gb|ABD88407.1| sodium:dicarboxylate symporter [Rhodopseudomonas palustris BisB18] Length = 449 Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/430 (78%), Positives = 388/430 (90%), Gaps = 1/430 (0%) Query: 14 AGSKPWYKVLYVQVLIAIVLGALVGWLWPGLATNEWIKALGDGFIKLIKMVIAPIIFCTV 73 A KPWYK+LY+QVL+AIVLG L+GWL P +ATNEW+KALGDGF+KLIKMVIAPIIFCTV Sbjct: 20 AARKPWYKLLYLQVLVAIVLGVLLGWLSPHIATNEWVKALGDGFVKLIKMVIAPIIFCTV 79 Query: 74 VSGIAHIQDAKKVGRIGVKALVYFEVVSTFALVIGLLVGNLVRPGAGFGNAAANAQAVAG 133 VSGIAHIQDA+KVGR+GVKAL+YFEVVS+FAL+IGL+VGN+V+ G G G A +A AV+ Sbjct: 80 VSGIAHIQDARKVGRVGVKALLYFEVVSSFALLIGLVVGNVVQIGHGLG-ATGDAAAVSK 138 Query: 134 YAKQAEAQKSVDFVLHIIPDTVVGAFAQGEILQVLLFSVLFGFAIMGLGERGHTIRSFID 193 Y KQAEAQ SVDFVL+IIPD+VVGAFA+G+ILQVLLF++LFGFA+M LGERGH +R ID Sbjct: 139 YVKQAEAQHSVDFVLNIIPDSVVGAFAKGDILQVLLFAILFGFALMTLGERGHRLRDVID 198 Query: 194 DAAHAVFGVISIVMRAAPIGAFGAMAFTIGKFGTGAILNLMGLIATFYLTAALFVFGVLG 253 DA+HAVFGVI+IVM+AAP+GAFGAMAFTIGKFG A+ NL+GLIA FY+TAALFV VLG Sbjct: 199 DASHAVFGVIAIVMKAAPVGAFGAMAFTIGKFGPAALGNLIGLIAVFYITAALFVVLVLG 258 Query: 254 IIARVAGFSIFKFLAYIKDELLIVLGTSSSESALPSLMEKLERLGCSKSVVGLVVPTGYS 313 +IA++ GF+IFKFL YIKDELLIVLGTSSSESALP LMEKLERLGCSKSVVGLVVPTGYS Sbjct: 259 LIAKIVGFNIFKFLKYIKDELLIVLGTSSSESALPQLMEKLERLGCSKSVVGLVVPTGYS 318 Query: 314 FNLDGTNIYMTLATLFIAQALGFDLTFSQQITILIVAMLTSKGASGITGAGFITLAATLA 373 FNLDGTNIYMTLATLFIAQALG DLT+++Q+TIL+VAMLTSKGASG++GAGFITLAATL+ Sbjct: 319 FNLDGTNIYMTLATLFIAQALGVDLTWTEQLTILLVAMLTSKGASGVSGAGFITLAATLS 378 Query: 374 VVDPRLVPGMAIVLGIDKFMSECRALTNLCGNGVACVIVAWWEGELDRDKLNANLARQID 433 VV+P LVPGMAIV +DKFMSE RALTN+ GNGVA V V+WWE ELD DKL A L + ID Sbjct: 379 VVNPALVPGMAIVFSVDKFMSEVRALTNITGNGVATVFVSWWENELDHDKLAAALNKTID 438 Query: 434 PTDMETALTT 443 P+D+ETA+TT Sbjct: 439 PSDIETAVTT 448 >ref|YP_001205518.1| C4-dicarboxylate transport protein [Bradyrhizobium sp. ORS 278] sp|A4YTR6.1|DCTA2_BRASO RecName: Full=C4-dicarboxylate transport protein 2 emb|CAL77292.1| C4-dicarboxylate transport protein [Bradyrhizobium sp. ORS 278] Length = 445 Score = 674 bits (1738), Expect = 0.0, Method: Compositional matrix adjust. Identities = 343/445 (77%), Positives = 388/445 (87%), Gaps = 3/445 (0%) Query: 1 MATATVV--TAAPASAGSKPWYKVLYVQVLIAIVLGALVGWLWPGLATNEWIKALGDGFI 58 MA AT + P+ G KPWY +LYVQVLIAI++G +VGWL+P LATN+WIKALGDGFI Sbjct: 1 MAAATDIGTRDVPSQTGKKPWYSILYVQVLIAILIGIVVGWLFPNLATNDWIKALGDGFI 60 Query: 59 KLIKMVIAPIIFCTVVSGIAHIQDAKKVGRIGVKALVYFEVVSTFALVIGLLVGNLVRPG 118 KLIKMVIAPIIFCTVVSGIAHIQ+A KVGR+GVKALVYFE+VSTFAL++GL+VGNL G Sbjct: 61 KLIKMVIAPIIFCTVVSGIAHIQNASKVGRVGVKALVYFEIVSTFALLLGLIVGNLAPIG 120 Query: 119 AGFGNAAANAQAVAGYAKQAEAQKSVDFVLHIIPDTVVGAFAQGEILQVLLFSVLFGFAI 178 G A +A AVA Y KQAEAQKSVDFVL+IIPD+VVGA A+G+ILQVLLF++LFGFA+ Sbjct: 121 HGL-AAKPDAAAVANYVKQAEAQKSVDFVLNIIPDSVVGALARGDILQVLLFAILFGFAL 179 Query: 179 MGLGERGHTIRSFIDDAAHAVFGVISIVMRAAPIGAFGAMAFTIGKFGTGAILNLMGLIA 238 M LGERGH +R IDD AHAVFGVI+IVM+AAP+GAFGAMAFTIGK+G A+ NL+GLIA Sbjct: 180 MALGERGHRLRDIIDDTAHAVFGVIAIVMKAAPVGAFGAMAFTIGKYGPAALGNLIGLIA 239 Query: 239 TFYLTAALFVFGVLGIIARVAGFSIFKFLAYIKDELLIVLGTSSSESALPSLMEKLERLG 298 FY+TA LFV VLG+IAR GFSIFKF+AYIKDELLIVLGTSSSESALP LMEKLERLG Sbjct: 240 LFYITAGLFVVIVLGLIARFIGFSIFKFVAYIKDELLIVLGTSSSESALPQLMEKLERLG 299 Query: 299 CSKSVVGLVVPTGYSFNLDGTNIYMTLATLFIAQALGFDLTFSQQITILIVAMLTSKGAS 358 CSK VVGLVVPTGYSFNLDGTNIYMTLATLFI+QALG DL+FSQQ+TILIVAMLTSKGAS Sbjct: 300 CSKPVVGLVVPTGYSFNLDGTNIYMTLATLFISQALGVDLSFSQQVTILIVAMLTSKGAS 359 Query: 359 GITGAGFITLAATLAVVDPRLVPGMAIVLGIDKFMSECRALTNLCGNGVACVIVAWWEGE 418 G+TGAGFITLAATL+VV+P LVPGMAIV IDKFMSE RALTN+ GNG+A V V+WWEGE Sbjct: 360 GVTGAGFITLAATLSVVNPALVPGMAIVFSIDKFMSEVRALTNITGNGIAAVFVSWWEGE 419 Query: 419 LDRDKLNANLARQIDPTDMETALTT 443 LD D L L +QIDP+D+ETA+TT Sbjct: 420 LDHDLLQRRLNQQIDPSDVETAVTT 444