BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0106.0090.p (439 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_533480.1| glycogen debranching protein GlgX [Rhodopseudom... 654 0.0 ref|YP_485870.1| glycogen debranching protein GlgX [Rhodopseudom... 649 0.0 ref|YP_570339.1| glycogen debranching protein GlgX [Rhodopseudom... 645 0.0 ref|YP_004108410.1| glycogen debranching protein GlgX [Rhodopseu... 634 e-180 ref|NP_948650.1| glycosyl hydrolase [Rhodopseudomonas palustris ... 629 e-178 >ref|YP_533480.1| glycogen debranching protein GlgX [Rhodopseudomonas palustris BisB18] gb|ABD89161.1| Glycogen debranching enzyme GlgX [Rhodopseudomonas palustris BisB18] Length = 701 Score = 654 bits (1687), Expect = 0.0, Method: Compositional matrix adjust. Identities = 306/433 (70%), Positives = 356/433 (82%) Query: 1 VLLDVVYNHTAEGNERGPTLSFKGIDNASYYRLLPDKRRYYINDTGTGNTVNLSHPRVIQ 60 V+LDVVYNHTAEG+E GPTLSFKGIDNASYYRLLPDK+RYYINDTGTGNTVNLS+PRVIQ Sbjct: 266 VILDVVYNHTAEGSELGPTLSFKGIDNASYYRLLPDKKRYYINDTGTGNTVNLSNPRVIQ 325 Query: 61 MVMDSLRYWAGHMHVDGFRFDLGTILAREVYGFDEQSGFLKAMNQDPLLATVKLIAEPWD 120 MV DSLRYW+ MH+DGFRFDLGTILAREVYGFDEQSGFLKA++QDP+L +VKLIAEPWD Sbjct: 326 MVADSLRYWSNEMHIDGFRFDLGTILAREVYGFDEQSGFLKAVDQDPVLTSVKLIAEPWD 385 Query: 121 CGPGGYQVGGFPAGWAEWNDKYRNVVRDFWRGEAAPGSLAPRLLGSHDVFNREGRRTWAS 180 GPGGYQVGGFP GWAEWNDK+R+ RDFWRGEA +L PRL GS D+FN +GRR WAS Sbjct: 386 IGPGGYQVGGFPPGWAEWNDKFRDTARDFWRGEADVATLVPRLSGSGDLFNHQGRRAWAS 445 Query: 181 VNFITAHDGFTLNDWASYNNKHNEANGERNNDGSSDNHSWNCGAEGPTDNPDIRTLRERQ 240 +NF+TAHDGFTLNDWASYN+KHNEANGE N DGSS N SWNCG EGPT++ DI LRERQ Sbjct: 446 INFVTAHDGFTLNDWASYNDKHNEANGEENRDGSSSNRSWNCGVEGPTEDKDILALRERQ 505 Query: 241 KRNMLATLLASQGTPMLLGGDEFGRTQRGNNNAYCQDNDISWFDWNFSDDAGKLLAFTRR 300 KRNML TLL SQGTPMLL GDEF RTQ GNNNAYCQD++ISW DWN DDA LL+FT+R Sbjct: 506 KRNMLGTLLLSQGTPMLLAGDEFARTQHGNNNAYCQDSEISWIDWNLGDDAKDLLSFTKR 565 Query: 301 MIKLRRDYPILRRSRFLSGDRDSQLEIRDVVWISTAGAEMTQADWTTGWIKCFGVVLDGR 360 +I+LR+ YP LRRSRFL+G D QL++ DV+WI+ GA M W +K FG++LDGR Sbjct: 566 LIELRKAYPTLRRSRFLTGQHDPQLDVCDVIWINANGAPMQDEQWQDTTMKSFGMLLDGR 625 Query: 361 ARKTAIARAGEDDTVLVILNSYEDEVDFKLPPTSAGPHWSLLLDTNAPEQPAGAQFAFDG 420 A+KT I + GED+TVL+++NS++ VDF LP T G W+LL+D+N P+ GA+F Sbjct: 626 AQKTGIRKHGEDETVLLVMNSFDGVVDFILPETPHGSKWALLIDSNIPDGAPGAEFPCGA 685 Query: 421 TYKAVGRSFVLLT 433 Y+ GRS +L T Sbjct: 686 MYQVTGRSLLLFT 698 >ref|YP_485870.1| glycogen debranching protein GlgX [Rhodopseudomonas palustris HaA2] gb|ABD06959.1| Glycogen debranching enzyme GlgX [Rhodopseudomonas palustris HaA2] Length = 733 Score = 649 bits (1673), Expect = 0.0, Method: Compositional matrix adjust. Identities = 307/432 (71%), Positives = 349/432 (80%) Query: 1 VLLDVVYNHTAEGNERGPTLSFKGIDNASYYRLLPDKRRYYINDTGTGNTVNLSHPRVIQ 60 V+LDVVYNHTAEGNE GPTLSFKGIDNASYYRLLP++ RYYINDTGTGNTVNL+HPRVIQ Sbjct: 298 VILDVVYNHTAEGNELGPTLSFKGIDNASYYRLLPEQERYYINDTGTGNTVNLTHPRVIQ 357 Query: 61 MVMDSLRYWAGHMHVDGFRFDLGTILAREVYGFDEQSGFLKAMNQDPLLATVKLIAEPWD 120 MV DSLRYWAG MH+DGFRFDLGTILAREV+GFD+QSGFLKA+NQDP+L++VKLIAEPWD Sbjct: 358 MVTDSLRYWAGEMHIDGFRFDLGTILAREVHGFDDQSGFLKAVNQDPMLSSVKLIAEPWD 417 Query: 121 CGPGGYQVGGFPAGWAEWNDKYRNVVRDFWRGEAAPGSLAPRLLGSHDVFNREGRRTWAS 180 CGPGGYQVGGFP GWAEWNDK+R+ +RD+WRG+A+ +LAPRL S DVFNR+GRR WAS Sbjct: 418 CGPGGYQVGGFPPGWAEWNDKFRDTIRDYWRGDASVSALAPRLAASGDVFNRQGRRAWAS 477 Query: 181 VNFITAHDGFTLNDWASYNNKHNEANGERNNDGSSDNHSWNCGAEGPTDNPDIRTLRERQ 240 VNFITAHDGFTLNDWASYN KHN ANGE DG SDN SWNCGAEGPTD+ I LRERQ Sbjct: 478 VNFITAHDGFTLNDWASYNEKHNIANGEDGKDGHSDNRSWNCGAEGPTDDEAILALRERQ 537 Query: 241 KRNMLATLLASQGTPMLLGGDEFGRTQRGNNNAYCQDNDISWFDWNFSDDAGKLLAFTRR 300 KRNMLATLL +QGTPMLL GDEFGRTQ+GNNNAYCQDN+ISW W+ A LL FT+R Sbjct: 538 KRNMLATLLLAQGTPMLLAGDEFGRTQQGNNNAYCQDNEISWVHWDHDAAAQDLLTFTKR 597 Query: 301 MIKLRRDYPILRRSRFLSGDRDSQLEIRDVVWISTAGAEMTQADWTTGWIKCFGVVLDGR 360 +I+LRR P LRRSRFL G D L++ DV WI+ G M W G +KCFG++LDGR Sbjct: 598 LIELRRTCPTLRRSRFLQGQYDEALDVCDVTWINANGGPMQTEHWEDGNVKCFGMLLDGR 657 Query: 361 ARKTAIARAGEDDTVLVILNSYEDEVDFKLPPTSAGPHWSLLLDTNAPEQPAGAQFAFDG 420 A+KT I R EDDTVL+I N+++ VDF LP G W LL+DTN P+ AG QFA Sbjct: 658 AQKTGIRRHAEDDTVLLITNAFDGVVDFNLPEVPHGSKWQLLIDTNLPDGAAGEQFACGA 717 Query: 421 TYKAVGRSFVLL 432 Y+ RS +L Sbjct: 718 AYQVTARSVLLF 729 >ref|YP_570339.1| glycogen debranching protein GlgX [Rhodopseudomonas palustris BisB5] gb|ABE40438.1| Glycogen debranching enzyme GlgX [Rhodopseudomonas palustris BisB5] Length = 728 Score = 645 bits (1664), Expect = 0.0, Method: Compositional matrix adjust. Identities = 312/432 (72%), Positives = 354/432 (81%) Query: 1 VLLDVVYNHTAEGNERGPTLSFKGIDNASYYRLLPDKRRYYINDTGTGNTVNLSHPRVIQ 60 V+LDVVYNHTAEGNE GPTLSFKGIDNASYYRLLPD++RYYINDTGTGNTVNL+HPRVIQ Sbjct: 293 VILDVVYNHTAEGNELGPTLSFKGIDNASYYRLLPDQKRYYINDTGTGNTVNLTHPRVIQ 352 Query: 61 MVMDSLRYWAGHMHVDGFRFDLGTILAREVYGFDEQSGFLKAMNQDPLLATVKLIAEPWD 120 MV DSLRYWAG MH+DGFRFDLGTILARE YGFDEQSGFLKA+NQDPLL++VKLIAEPWD Sbjct: 353 MVTDSLRYWAGEMHIDGFRFDLGTILARETYGFDEQSGFLKAVNQDPLLSSVKLIAEPWD 412 Query: 121 CGPGGYQVGGFPAGWAEWNDKYRNVVRDFWRGEAAPGSLAPRLLGSHDVFNREGRRTWAS 180 CGPGGYQVGGFP GWAEWNDK+R+ +RD+WRGEA +LAPRL GS DVFNR+GRR WAS Sbjct: 413 CGPGGYQVGGFPPGWAEWNDKFRDTIRDYWRGEAPAAALAPRLSGSGDVFNRQGRRAWAS 472 Query: 181 VNFITAHDGFTLNDWASYNNKHNEANGERNNDGSSDNHSWNCGAEGPTDNPDIRTLRERQ 240 VNFITAHDGFTLNDWASYN+KHN ANGE DG SDN SWNCGAEGPTD+ I +LRERQ Sbjct: 473 VNFITAHDGFTLNDWASYNDKHNAANGEDGKDGHSDNRSWNCGAEGPTDDEAILSLRERQ 532 Query: 241 KRNMLATLLASQGTPMLLGGDEFGRTQRGNNNAYCQDNDISWFDWNFSDDAGKLLAFTRR 300 KRNMLATLL +QGTPMLL GDEFGRTQ+GNNNAYCQDN+ISW W+ SD A LL+FT R Sbjct: 533 KRNMLATLLLAQGTPMLLAGDEFGRTQQGNNNAYCQDNEISWVHWDHSDTAKDLLSFTTR 592 Query: 301 MIKLRRDYPILRRSRFLSGDRDSQLEIRDVVWISTAGAEMTQADWTTGWIKCFGVVLDGR 360 +++LRR YP LRRSRFL+G D LE+ DV WI+ G M + W +KCFG++LDGR Sbjct: 593 LMELRRAYPTLRRSRFLTGHYDETLEVCDVTWINANGGAMQEEHWHDSNVKCFGMLLDGR 652 Query: 361 ARKTAIARAGEDDTVLVILNSYEDEVDFKLPPTSAGPHWSLLLDTNAPEQPAGAQFAFDG 420 A+K+ I R EDDTVL+I NS++ V+F LP G W LL+DTN P+ G QFA Sbjct: 653 AQKSGIRRHAEDDTVLLITNSFDGVVEFTLPEVPHGSKWQLLIDTNIPDGSPGEQFACGS 712 Query: 421 TYKAVGRSFVLL 432 Y+ RS +L Sbjct: 713 IYQVTARSVLLF 724 >ref|YP_004108410.1| glycogen debranching protein GlgX [Rhodopseudomonas palustris DX-1] gb|ADU43677.1| glycogen debranching enzyme GlgX [Rhodopseudomonas palustris DX-1] Length = 734 Score = 634 bits (1636), Expect = e-180, Method: Compositional matrix adjust. Identities = 308/432 (71%), Positives = 351/432 (81%) Query: 1 VLLDVVYNHTAEGNERGPTLSFKGIDNASYYRLLPDKRRYYINDTGTGNTVNLSHPRVIQ 60 V+LDVVYNHTAEGNE GPTLSFKGIDNASYYRLLP+++RYYINDTGTGNTVNL+HPRVIQ Sbjct: 299 VILDVVYNHTAEGNELGPTLSFKGIDNASYYRLLPEQKRYYINDTGTGNTVNLTHPRVIQ 358 Query: 61 MVMDSLRYWAGHMHVDGFRFDLGTILAREVYGFDEQSGFLKAMNQDPLLATVKLIAEPWD 120 MV DSLRYWAG MH+DGFRFDLGTILARE YGFDEQSGFLK++ QDPLL++VKLIAEPWD Sbjct: 359 MVNDSLRYWAGEMHIDGFRFDLGTILAREHYGFDEQSGFLKSVMQDPLLSSVKLIAEPWD 418 Query: 121 CGPGGYQVGGFPAGWAEWNDKYRNVVRDFWRGEAAPGSLAPRLLGSHDVFNREGRRTWAS 180 CGPGGYQVGGFP GWAEWNDK+R+ VRD+WRGEA +LAPRL S DVFNR+GRR WAS Sbjct: 419 CGPGGYQVGGFPPGWAEWNDKFRDTVRDYWRGEAPAAALAPRLSASGDVFNRQGRRAWAS 478 Query: 181 VNFITAHDGFTLNDWASYNNKHNEANGERNNDGSSDNHSWNCGAEGPTDNPDIRTLRERQ 240 VNFITAHDGFTLNDWASYN+KHN ANGE N DG SDN SWNCGAEGPTD+ I LRERQ Sbjct: 479 VNFITAHDGFTLNDWASYNDKHNAANGEDNRDGHSDNRSWNCGAEGPTDDETIVALRERQ 538 Query: 241 KRNMLATLLASQGTPMLLGGDEFGRTQRGNNNAYCQDNDISWFDWNFSDDAGKLLAFTRR 300 KRNMLATLL +QGTPMLL GDEFGRTQ GNNNAYCQDN+ISW W+ + A LLAFT+R Sbjct: 539 KRNMLATLLLAQGTPMLLAGDEFGRTQNGNNNAYCQDNEISWVHWDHDEAAQHLLAFTQR 598 Query: 301 MIKLRRDYPILRRSRFLSGDRDSQLEIRDVVWISTAGAEMTQADWTTGWIKCFGVVLDGR 360 +++LRR P LRRSRFL+G D +L++RDV WI+ G EM Q W +KCFG++LDGR Sbjct: 599 LLELRRTTPTLRRSRFLTGQYDEELDVRDVTWINANGGEMQQEHWDDPNVKCFGMLLDGR 658 Query: 361 ARKTAIARAGEDDTVLVILNSYEDEVDFKLPPTSAGPHWSLLLDTNAPEQPAGAQFAFDG 420 A+ T I + GE TVL+++NS++ VDF LP G WSLL+DTN P QFA Sbjct: 659 AQTTGIHKHGEHATVLLVMNSFDGVVDFTLPEVPHGSTWSLLIDTNLPSGLPDEQFACGA 718 Query: 421 TYKAVGRSFVLL 432 Y+ RS +L Sbjct: 719 VYQVTARSVLLF 730 >ref|NP_948650.1| glycosyl hydrolase [Rhodopseudomonas palustris CGA009] emb|CAE28752.1| glycosyl hydrolase [Rhodopseudomonas palustris CGA009] Length = 733 Score = 629 bits (1621), Expect = e-178, Method: Compositional matrix adjust. Identities = 305/432 (70%), Positives = 349/432 (80%) Query: 1 VLLDVVYNHTAEGNERGPTLSFKGIDNASYYRLLPDKRRYYINDTGTGNTVNLSHPRVIQ 60 V+LDVVYNHTAEGNE GPTLSFKGIDNASYYRLLP+++RYYINDTGTGNTVNL+HPRVIQ Sbjct: 298 VILDVVYNHTAEGNELGPTLSFKGIDNASYYRLLPEQKRYYINDTGTGNTVNLTHPRVIQ 357 Query: 61 MVMDSLRYWAGHMHVDGFRFDLGTILAREVYGFDEQSGFLKAMNQDPLLATVKLIAEPWD 120 MV DSLRYWAG MH+DGFRFDLGTILARE YGFDEQSGFLK++ QDPLL++VKLIAEPWD Sbjct: 358 MVNDSLRYWAGEMHIDGFRFDLGTILAREHYGFDEQSGFLKSVMQDPLLSSVKLIAEPWD 417 Query: 121 CGPGGYQVGGFPAGWAEWNDKYRNVVRDFWRGEAAPGSLAPRLLGSHDVFNREGRRTWAS 180 CGPGGYQVGGFP GWAEWNDK+R+ RD+WRGEA +LAPRL S DVFNR+GRR WAS Sbjct: 418 CGPGGYQVGGFPPGWAEWNDKFRDTARDYWRGEAPAAALAPRLSASGDVFNRQGRRAWAS 477 Query: 181 VNFITAHDGFTLNDWASYNNKHNEANGERNNDGSSDNHSWNCGAEGPTDNPDIRTLRERQ 240 VNFITAHDGFTLNDWASYN+KHNEANGE N DG SDN SWNCGAEGPTD+ I +LRERQ Sbjct: 478 VNFITAHDGFTLNDWASYNDKHNEANGEDNRDGHSDNRSWNCGAEGPTDDETILSLRERQ 537 Query: 241 KRNMLATLLASQGTPMLLGGDEFGRTQRGNNNAYCQDNDISWFDWNFSDDAGKLLAFTRR 300 KRNMLATLL +QGTPMLL GDEFGRTQ GNNNAYCQDN+ISW W+ + A L AFT+R Sbjct: 538 KRNMLATLLLAQGTPMLLAGDEFGRTQNGNNNAYCQDNEISWVHWDHDEAAQHLRAFTQR 597 Query: 301 MIKLRRDYPILRRSRFLSGDRDSQLEIRDVVWISTAGAEMTQADWTTGWIKCFGVVLDGR 360 +++LRR P LRRSRFL+G D L++RDV WI+ G EM Q W +KCFG++LDGR Sbjct: 598 LLELRRTTPTLRRSRFLTGQYDETLDVRDVTWINANGGEMQQEHWDDSNVKCFGMLLDGR 657 Query: 361 ARKTAIARAGEDDTVLVILNSYEDEVDFKLPPTSAGPHWSLLLDTNAPEQPAGAQFAFDG 420 A+ T I R GE+ TVL++LN ++ V+F LP G WSLL+DTN P +F Sbjct: 658 AQTTGIRRLGEEATVLLVLNGFDGMVEFTLPEVPHGTKWSLLIDTNLPHGVPDEEFECGA 717 Query: 421 TYKAVGRSFVLL 432 Y+ RS +L Sbjct: 718 AYQVTARSVLLF 729