BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0106.0086.p (419 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002500799.1| TPR repeat-containing protein [Methylobacter... 542 e-152 ref|YP_001768844.1| hypothetical protein M446_1942 [Methylobacte... 520 e-145 ref|NP_841259.1| TPR repeat-containing protein [Nitrosomonas eur... 339 4e-91 ref|YP_548900.1| hypothetical protein Bpro_2073 [Polaromonas sp.... 334 2e-89 gb|AEH26524.1| tetratricopeptide [uncultured Acidobacteria bacte... 333 4e-89 >ref|YP_002500799.1| TPR repeat-containing protein [Methylobacterium nodulans ORS 2060] gb|ACL60496.1| tetratricopeptide TPR_4 [Methylobacterium nodulans ORS 2060] Length = 530 Score = 542 bits (1396), Expect = e-152, Method: Compositional matrix adjust. Identities = 266/417 (63%), Positives = 321/417 (76%), Gaps = 1/417 (0%) Query: 1 LGKVHFVTSCKPEAQELFDRAMLYQHSFWYSASRRTFEEVLEADPQCAIAYWGIALSYLY 60 LG VHF TSC AQ FDR M YQHS+WY A++ FEE L+ADP CA+A WGIAL+YL Sbjct: 33 LGSVHFKTSCNEVAQRRFDRGMRYQHSYWYLAAKEVFEEALKADPTCAMAEWGIALTYLD 92 Query: 61 NPHAPPPPENLPLGLAAAKKGQALNAGTPREREYIDAIAAMYVDYDKVDHRTRVQRFLAA 120 NPH P P NL GLAA ++ +ALN T RER+YIDA+A MY DYDK+ HR R++ F A Sbjct: 93 NPHNPIPQANLAPGLAAIERAKALNPKTERERDYIDALALMYTDYDKLSHRQRIRLFRDA 152 Query: 121 EEQVAAHYADDDEAQIAYAITLNVAASPADKTYANQLKGAALLEPIFKRQPEHPGIAHYL 180 +E++AA Y DDDEAQIAYAITLN +A DKTY QLKGAA+LEP+ KR P+HPG+ HYL Sbjct: 153 QEKMAAKYPDDDEAQIAYAITLNTSADLNDKTYTQQLKGAAILEPLSKRLPQHPGVTHYL 212 Query: 181 IHLYDYPALAAKGLPAAMRYAKIAEHAPHAQHMPSHIFTRVGYWKESIASNKESARIAKE 240 IHLYDYP LAAKGL AA RYA+IA APHAQHMPSHI+TRVGYWKESI SN S + A+ Sbjct: 213 IHLYDYPELAAKGLDAAHRYAQIAPAAPHAQHMPSHIYTRVGYWKESIDSNTASLKAARA 272 Query: 241 DGEQQDQAHAMDYLVYAYLQLGQDKEARAVIDELGK-LQFKLDRFAGPFAVAASQARYVF 299 + + HA DY+VYA+LQLGQD EARAV++++ + FK A +A+AAS ARY Sbjct: 273 EKSVGNYLHAQDYMVYAHLQLGQDNEARAVVEDMVRETDFKATVLAAHYALAASPARYAI 332 Query: 300 ERGDWKGAAALEVHPTKYAYADAITYFARAVGAARSGDPAAAKADVAKLVELRDKLKDAK 359 ERGDW A+ L V P+ +AYA A+T+FARA+GAARSG P AA D+AKL ELRD L++ K Sbjct: 333 ERGDWHAASQLTVRPSPFAYATAMTHFARALGAARSGQPEAAAPDIAKLAELRDTLRETK 392 Query: 360 DAYWSNIVDIQQQIASAWVLYAEGKYDEALGAMNAAAEAEDKTEKHPVTPGPLAPAR 416 D YWS IVDIQ+Q+A+AWVL+AEG++DEAL AM+AAA+AEDKT KH +TPGPLAPAR Sbjct: 393 DVYWSEIVDIQRQLAAAWVLHAEGRHDEALKAMSAAADAEDKTNKHVITPGPLAPAR 449 >ref|YP_001768844.1| hypothetical protein M446_1942 [Methylobacterium sp. 4-46] gb|ACA16410.1| Tetratricopeptide TPR_4 [Methylobacterium sp. 4-46] Length = 530 Score = 520 bits (1339), Expect = e-145, Method: Compositional matrix adjust. Identities = 257/417 (61%), Positives = 316/417 (75%), Gaps = 1/417 (0%) Query: 1 LGKVHFVTSCKPEAQELFDRAMLYQHSFWYSASRRTFEEVLEADPQCAIAYWGIALSYLY 60 LG VHF TSC AQ FDR M YQHS+WYSA+R FEE L+ADP CAIA WGIAL+YL Sbjct: 33 LGSVHFETSCNEVAQRRFDRGMRYQHSYWYSAAREVFEEALKADPACAIAEWGIALTYLD 92 Query: 61 NPHAPPPPENLPLGLAAAKKGQALNAGTPREREYIDAIAAMYVDYDKVDHRTRVQRFLAA 120 NPH P P NL GLAA ++ +AL+ T RER+YIDA+A MY D+DK+ H R++ F A Sbjct: 93 NPHNPIPQPNLAPGLAAIQRAKALDPRTERERDYIDALALMYTDFDKLSHGHRIRLFRDA 152 Query: 121 EEQVAAHYADDDEAQIAYAITLNVAASPADKTYANQLKGAALLEPIFKRQPEHPGIAHYL 180 +E++AA Y DDEAQIAYAITLN +A DKTYA QLKG ++L+P+ KR P HPG+ HYL Sbjct: 153 QEKMAAKYMHDDEAQIAYAITLNTSADLNDKTYAQQLKGISILDPLSKRLPRHPGVTHYL 212 Query: 181 IHLYDYPALAAKGLPAAMRYAKIAEHAPHAQHMPSHIFTRVGYWKESIASNKESARIAKE 240 IHLYDYP LAA+GL AA RYA+IA APHAQHMPSHI+TRVG+WK+SI SN S + A+ Sbjct: 213 IHLYDYPELAARGLEAAHRYAQIAPAAPHAQHMPSHIYTRVGHWKDSIDSNTASWKAARA 272 Query: 241 DGEQQDQAHAMDYLVYAYLQLGQDKEARAVI-DELGKLQFKLDRFAGPFAVAASQARYVF 299 + + HA DY+VYAYLQLGQD +ARAV+ D + + +FK A +A+AAS ARY Sbjct: 273 EKSIGNYLHAQDYMVYAYLQLGQDDQARAVVEDMMHETEFKATVLAAHYALAASPARYAV 332 Query: 300 ERGDWKGAAALEVHPTKYAYADAITYFARAVGAARSGDPAAAKADVAKLVELRDKLKDAK 359 ERG+W A+ L V P+ +AY AIT+FARA+GAARSG P AA D+A L LRD L+DAK Sbjct: 333 ERGEWSAASQLSVRPSPFAYVTAITHFARALGAARSGQPEAAAPDIATLAGLRDNLRDAK 392 Query: 360 DAYWSNIVDIQQQIASAWVLYAEGKYDEALGAMNAAAEAEDKTEKHPVTPGPLAPAR 416 D YW+ IVDIQ+Q+A+AWVL+A+G++DEAL AM+AAA+ ED+T KH VTPGPLAPAR Sbjct: 393 DVYWAEIVDIQRQVAAAWVLHAQGRHDEALKAMSAAADLEDRTNKHVVTPGPLAPAR 449 >ref|NP_841259.1| TPR repeat-containing protein [Nitrosomonas europaea ATCC 19718] emb|CAD85115.1| TPR repeat [Nitrosomonas europaea ATCC 19718] Length = 537 Score = 339 bits (870), Expect = 4e-91, Method: Compositional matrix adjust. Identities = 189/431 (43%), Positives = 261/431 (60%), Gaps = 17/431 (3%) Query: 1 LGKVHFVTSCKPEAQELFDRAMLYQHSFWYSASRRTFEEVLEADPQCAIAYWGIALSYLY 60 +G VHF C AQ F+ A+ Y HSF + T ++VL+ DP C +A+W AL+ L Sbjct: 35 IGDVHFKVECNATAQAKFNVAVAYYHSFQWQRVIATADDVLKVDPTCGMAHWVKALAMLD 94 Query: 61 NPHAPPPPENL------PLGLAAAKKGQALNAGTPREREYIDAIAAMYVDYDKVDHRTRV 114 NP A P + P+ L AA+K T RER+Y+DA+A + D + ++R R Sbjct: 95 NPFAWPVTLSEKAIAEGPVLLDAARKA---GLKTQRERDYVDALAIFFKDLNTTNYRERA 151 Query: 115 QRFLAAEEQVAAHYADDDEAQIAYAITLNVAASPADKTYANQLKGAALLEPIFKRQPEHP 174 + F A Q+A ADD EA + YA+ L+ P DKTY NQL A LLEPIF R+P HP Sbjct: 152 ESFEKAMAQLAQQNADDSEATVLYALILSRNFDPTDKTYRNQLHAAELLEPIFAREPNHP 211 Query: 175 GIAHYLIHLYDYPALAAKGLPAAMRYAKIAEHAPHAQHMPSHIFTRVGYWKESIASNKES 234 G+AHYLIH YDYP LA +G+ AA +YAKIA PH+ HMPSHIFT G+W+ESI +N+ + Sbjct: 212 GVAHYLIHSYDYPPLAKRGIDAARKYAKIAPDTPHSLHMPSHIFTLTGFWQESIDTNRRA 271 Query: 235 ARIAKEDGEQQDQAHAMDYLVYAYLQLGQDKEARAVIDELGKLQFKLDRFAGPFAVAASQ 294 A +A +D D HA DY+VYA+LQLGQD AR ++++ +++ +D + AA Sbjct: 272 AEMA-DDSITHDGHHASDYMVYAHLQLGQDLAARKIMEQ-EQVRHGIDMIGVAYPYAAIP 329 Query: 295 ARYVFERGDWKGAAAL-----EVHP-TKYAYADAITYFARAVGAARSGDPAAAKADVAKL 348 AR ER W+ AA L + +P KY A+A+ FAR VG+A SG+PA A + +L Sbjct: 330 ARIALERRAWREAADLPLYARDTYPWKKYPQAEAVNAFARGVGSAMSGEPAKANFEAKRL 389 Query: 349 VELRDKLKDAKDAYWSNIVDIQQQIASAWVLYAEGKYDEALGAMNAAAEAEDKTEKHPVT 408 ++LRD K YW++ +DIQ ++ +AEGK DE + ++ AAE ED + K+ VT Sbjct: 390 IKLRDAATAMKLNYWADQIDIQAEVVRGLADFAEGKRDEGIAILHRAAEREDASAKNVVT 449 Query: 409 PGPLAPARXRL 419 PGP+ PAR L Sbjct: 450 PGPVVPAREML 460 >ref|YP_548900.1| hypothetical protein Bpro_2073 [Polaromonas sp. JS666] gb|ABE44002.1| TPR repeat [Polaromonas sp. JS666] Length = 532 Score = 334 bits (856), Expect = 2e-89, Method: Compositional matrix adjust. Identities = 206/423 (48%), Positives = 273/423 (64%), Gaps = 4/423 (0%) Query: 1 LGKVHFVTSCKPEAQELFDRAMLYQHSFWYSASRRTFEEVLEADPQCAIAYWGIALSYLY 60 LGKV F SC + Q+ RA+ HSFW+SA + F VLE DP C +A +GIA + Sbjct: 32 LGKVAFANSCDAKVQKELQRAVAMLHSFWFSAGEKAFRHVLEDDPACGVATFGIAAILMN 91 Query: 61 NPHAP--PPPENLPLGLAAAKKGQALNAGTPREREYIDAIAAMYVDYDKVDHRTRVQRFL 118 NP A P+ AA ++G+ + A T RER+YI+A+A+ Y D+ R R Sbjct: 92 NPLAGQGASPKAAETAAAAIEQGRRVGAKTQRERDYIEAVASYYADFANKPERARQAARA 151 Query: 119 AAEEQVAAHYADDDEAQIAYAITLNVAASPADKTYANQLKGAALLEPIFKRQPEHPGIAH 178 A E +AA Y DDDEAQI A+ + S AD+TYA LK A +LE + P+HPG+AH Sbjct: 152 QAFEALAAKYPDDDEAQIFAALYIAGTQSQADQTYAAYLKAATVLEKQLVKYPDHPGVAH 211 Query: 179 YLIHLYDYPALAAKGLPAAMRYAKIAEHAPHAQHMPSHIFTRVGYWKESIASNKESARIA 238 YLIH YD P +AAKGLPAA RYA IA APHA HMPSHIFTRVG W +S+++N+ SA +A Sbjct: 212 YLIHSYDAPPIAAKGLPAARRYAGIAPDAPHALHMPSHIFTRVGAWTDSVSTNRRSADVA 271 Query: 239 KED-GEQQDQAHAMDYLVYAYLQLGQDKEARAVIDELGKLQF-KLDRFAGPFAVAASQAR 296 K+D + + HA DY+VYA LQLG+D+EAR V++E K+ +FAGP+A AA AR Sbjct: 272 KKDPADAANAYHAADYMVYAQLQLGRDQEARRVMEEFKSADGAKVAQFAGPYAAAAMPAR 331 Query: 297 YVFERGDWKGAAALEVHPTKYAYADAITYFARAVGAARSGDPAAAKADVAKLVELRDKLK 356 ERGDW AA L T +A+ +AIT F+RA+GAAR GD AAA+ + +L L Sbjct: 332 LALERGDWAAAAQLVPQGTAFAHCEAITSFSRALGAARMGDVAAAEQEAQRLEAQHKALV 391 Query: 357 DAKDAYWSNIVDIQQQIASAWVLYAEGKYDEALGAMNAAAEAEDKTEKHPVTPGPLAPAR 416 +AK+ YW+ V++Q+ A+AW+ A+G++DEAL M AAA+ ED++EKH VTPG + PAR Sbjct: 392 EAKNNYWATEVEVQRIAAAAWIAKAKGQHDEALRLMRAAADMEDRSEKHIVTPGRVVPAR 451 Query: 417 XRL 419 L Sbjct: 452 ELL 454 >gb|AEH26524.1| tetratricopeptide [uncultured Acidobacteria bacterium A12] Length = 526 Score = 333 bits (854), Expect = 4e-89, Method: Compositional matrix adjust. Identities = 199/428 (46%), Positives = 265/428 (61%), Gaps = 9/428 (2%) Query: 1 LGKVHFVTSCKPEAQELFDRAMLYQHSFWYSASRRTFEEVLEADPQCAIAYWGIALSYLY 60 +G V F TSC P + F+ A+ HSFW++ SR FE VL+ DP CA+AYWGIAL++ Sbjct: 23 IGTVDFATSCNPATKTKFNEAVALLHSFWFAESRAVFESVLKDDPACAMAYWGIALTHWG 82 Query: 61 NPHAP-PPPENLPLGLAAAKKGQALNAGTPREREYIDAIAAMYVDYDKVDHRTRVQRFLA 119 NP A P+ + G AA KG + T RE+ Y+DA+A ++ D R RV + Sbjct: 83 NPFAGLRQPQTIANGKAAIDKGLSTGTPTAREKGYLDAVAILFSSADVTTQRQRVLDYER 142 Query: 120 AEEQVAAHYADDDEAQIAYAITLNVAASPADKTYANQLKGAALLEPIFKRQPEHPGIAHY 179 A + + DD EA+I +A+ + AASP DKTYA QL+ A +LEP++ + P HPG+AHY Sbjct: 143 ATLRTSQANKDDVEARIFWALAVAQAASPTDKTYARQLQAAEILEPMYAKLPNHPGLAHY 202 Query: 180 LIHLYDYPALAAKGLPAAMRYAKIAEHAPHAQHMPSHIFTRVGYWKESIASNKESARIAK 239 +IH YD P LA K L AA YA IA PHA HMPSH FTRVGYW++S+ SN +S+ IA+ Sbjct: 203 IIHAYDVPVLAPKALKAANAYAGIAPAVPHALHMPSHTFTRVGYWQQSVDSNIKSSEIAE 262 Query: 240 EDGEQQDQAHAMDYLVYAYLQLGQDKEARAVID---ELGKLQFKLDRFA----GPFAVAA 292 + + HA DY+ YAYLQ+G D +A+ ++ LG + A FA+AA Sbjct: 263 KTNGIGEAMHARDYMTYAYLQMGMDAQAKVNLEHAMRLGTMTGGAQGAAGAGPNTFAMAA 322 Query: 293 SQARYVFERGDWKGAAALEVHPTKYA-YADAITYFARAVGAARSGDPAAAKADVAKLVEL 351 ARY ER W A L +P A Y +AIT+FARA+GAAR+G P AA AD+A+L + Sbjct: 323 IPARYAMERQQWSDAMTLTPNPAPTAPYTEAITHFARAIGAARAGKPDAAAADIARLAAI 382 Query: 352 RDKLKDAKDAYWSNIVDIQQQIASAWVLYAEGKYDEALGAMNAAAEAEDKTEKHPVTPGP 411 RD+ + KD YW+ VDIQ++ A AWV++A+G A+ AM A ED T+K VTPGP Sbjct: 383 RDREIEMKDEYWAQQVDIQRRGAEAWVMFAKGDKAGAIAAMKETAALEDATDKSAVTPGP 442 Query: 412 LAPARXRL 419 LAPAR L Sbjct: 443 LAPARELL 450