BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0106.0084.p         (134 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_002500062.1| hypothetical protein Mnod_4902 [Methylobacte...    40   0.12 
ref|XP_759507.1| hypothetical protein UM03360.1 [Ustilago maydis...    36   2.4  
ref|YP_004814610.1| fumarate reductase/succinate dehydrogenase f...    35   3.4  
gb|EFW99897.1| hypothetical protein CMQ_215 [Grosmannia claviger...    35   5.3  
ref|ZP_08882797.1| fumarate reductase/succinate dehydrogenase fl...    34   9.2  

>ref|YP_002500062.1| hypothetical protein Mnod_4902 [Methylobacterium nodulans ORS 2060]
 gb|ACL59759.1| hypothetical protein Mnod_4902 [Methylobacterium nodulans ORS 2060]
          Length = 129

 Score = 40.0 bits (92), Expect = 0.12,   Method: Compositional matrix adjust.
 Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 3/81 (3%)

Query: 30  MEILGQAGVLGEWELTGHLTESPPGAPRQF-SGPLKMKHVGICT-QDGPDERAGEIKLQI 87
           + ++G+ G LGEW +   L  +   AP     GPL +KH G+C+   G +E+ GE+ L  
Sbjct: 23  VRLVGRTGFLGEWAIAASLDPAAGQAPGGLLKGPLTLKHTGMCSPGGGAEEKNGEMTL-T 81

Query: 88  TGTDSQVTAELVLDGAPCTYS 108
            G   +V   L      C++ 
Sbjct: 82  PGRGGRVAVRLRAGDQDCSFD 102


>ref|XP_759507.1| hypothetical protein UM03360.1 [Ustilago maydis 521]
 gb|EAK84228.1| hypothetical protein UM03360.1 [Ustilago maydis 521]
          Length = 1716

 Score = 35.8 bits (81), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 4/46 (8%)

Query: 1    MPRTTWRSGGAALLGAVALSLCQVPPVGAMEILGQAGVLGEWELTG 46
            +PRT W   G A+  + AL   + PPVG   I     V+  W  TG
Sbjct: 1609 LPRTVWNDAGDAIFVSDALPSSKTPPVGVFRI----HVIASWRRTG 1650


>ref|YP_004814610.1| fumarate reductase/succinate dehydrogenase flavoprotein
           domain-containing protein [Streptomyces violaceusniger
           Tu 4113]
 gb|AEM84330.1| fumarate reductase/succinate dehydrogenase flavoprotein domain
           protein [Streptomyces violaceusniger Tu 4113]
          Length = 422

 Score = 35.0 bits (79), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 31/114 (27%), Positives = 46/114 (40%), Gaps = 14/114 (12%)

Query: 5   TWRSGGAALLGAVALSLCQVPPVGAMEILGQAGVLGEWELTGHLTESPPGAPRQFSGPLK 64
            W  G  ALLG    ++      GA + +  A VL E EL         GA R++    +
Sbjct: 298 VWLDGRVALLGDACHAMLPYQAQGASQAMEDAAVLAE-ELGAVTASGIEGALRRYVDR-R 355

Query: 65  MKHVGICTQ------------DGPDERAGEIKLQITGTDSQVTAELVLDGAPCT 106
            KH G+               DGP++RA + KL     +S V+ + +  G P  
Sbjct: 356 AKHAGMVQDASLANKTFYHLADGPEQRARDEKLTNFDGESDVSYDWLWSGTPLN 409


>gb|EFW99897.1| hypothetical protein CMQ_215 [Grosmannia clavigera kw1407]
          Length = 284

 Score = 34.7 bits (78), Expect = 5.3,   Method: Compositional matrix adjust.
 Identities = 28/97 (28%), Positives = 44/97 (45%), Gaps = 5/97 (5%)

Query: 35  QAGVLGEWELTGHLTESPPGAPRQFSGPLKMKHVGICTQDGPDERAGEIKLQITGTDSQV 94
           Q GV+ E  L G L  +PPG  +     L +  VG+  +DG ++    +  ++   D  +
Sbjct: 40  QGGVVAEEHLRGVLDGAPPGIDKLLDKDLSVDAVGLLAEDGAEDNGDAVVARLD-VDGLL 98

Query: 95  TAELVLDGAPCTYSARKTRNYEGTLSCEGRPPVPLLV 131
            A  V+DG   T  A   R   G +   GR  + L+V
Sbjct: 99  LA--VVDGHDLTTLADALRRLFGRVL--GRLFLELVV 131


>ref|ZP_08882797.1| fumarate reductase/succinate dehydrogenase flavoprotein
           domain-containing protein [Saccharopolyspora spinosa
           NRRL 18395]
          Length = 423

 Score = 33.9 bits (76), Expect = 9.2,   Method: Compositional matrix adjust.
 Identities = 32/124 (25%), Positives = 53/124 (42%), Gaps = 14/124 (11%)

Query: 5   TWRSGGAALLGAVALSLCQVPPVGAMEILGQAGVLGEWELTGHLTESPPGAPRQFSGPLK 64
            W  G  ALLG    ++      GA + +  A VL E EL G +T     A        +
Sbjct: 299 VWVDGRVALLGDACHAMLPYQAQGASQAMEDAAVLAE-EL-GRVTRDGIEAALVRYVDRR 356

Query: 65  MKHVGICTQ------------DGPDERAGEIKLQITGTDSQVTAELVLDGAPCTYSARKT 112
            KH G+               DGP++R  + KL+    +S V+ + + +G+P T    ++
Sbjct: 357 AKHAGMVQDASLQNMSFYHLPDGPEQRERDEKLRRFDGESDVSYDWLWNGSPLTDLDTES 416

Query: 113 RNYE 116
            +Y+
Sbjct: 417 IHYQ 420