BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0106.0083.p (251 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_004847741.1| NmrA family protein [Pseudogulbenkiania sp. ... 399 e-109 ref|YP_840925.1| nucleoside-diphosphate-sugar epimerase [Ralston... 396 e-108 ref|YP_004682228.1| hypothetical protein CNE_2c20450 [Cupriavidu... 396 e-108 ref|ZP_03697442.1| NmrA family protein [Lutiella nitroferrum 200... 392 e-107 ref|YP_001861698.1| NmrA family protein [Burkholderia phymatum S... 390 e-106 >ref|YP_004847741.1| NmrA family protein [Pseudogulbenkiania sp. NH8B] dbj|BAK77327.1| NmrA family protein [Pseudogulbenkiania sp. NH8B] Length = 251 Score = 399 bits (1024), Expect = e-109, Method: Compositional matrix adjust. Identities = 196/251 (78%), Positives = 226/251 (90%) Query: 1 MKIVVIGGTGLIGSKTVAILRQRGHEVVAASPKNGINAITSEGLKEALAGAAVVIDLANS 60 MKIVVIGGTGLIGSKTV ILRQ GHEVVAASPK+G+N IT EGL+E ++GA VVIDL+N+ Sbjct: 1 MKIVVIGGTGLIGSKTVPILRQAGHEVVAASPKSGVNTITGEGLQEVMSGAQVVIDLSNA 60 Query: 61 PSFEDKAVMEFFETSGRNLLAAEKPAGVRHHVALSIVGTDRTPENGYFRAKVAQEKLIEA 120 PS+ED+AV+EFF+TSGRN+ AAE AGV+HHVALSIVGTDR P NGYFRAKVAQEKLIEA Sbjct: 61 PSWEDQAVLEFFQTSGRNVHAAEAAAGVQHHVALSIVGTDRMPGNGYFRAKVAQEKLIEA 120 Query: 121 SGIAYTIIRATQFMEFVGAIADASAVGNTVRLSPGLFQPIAAEDVSALVADIALEPPRNG 180 SGI YTIIR+TQFMEF+G IAD+S GNTVRL+PGLFQPIA++DV+ALVAD+AL PRNG Sbjct: 121 SGIPYTIIRSTQFMEFLGGIADSSTDGNTVRLAPGLFQPIASDDVAALVADVALTAPRNG 180 Query: 181 IVEIAGPDRAPFNEIVARYLKAKGDPREVVKDPDALYWGGRVEQHSLVPLGEARLGGIDL 240 IVEIAGP+RAPF+EIVARYLKA GD REVV DP+A Y+GGRVE++SLVPLGEARLG I L Sbjct: 181 IVEIAGPERAPFSEIVARYLKAIGDRREVVSDPEARYFGGRVEEYSLVPLGEARLGSIGL 240 Query: 241 NEWLRRARPAA 251 +EWLRR++ A Sbjct: 241 DEWLRRSQAGA 251 >ref|YP_840925.1| nucleoside-diphosphate-sugar epimerase [Ralstonia eutropha H16] emb|CAJ96195.1| predicted nucleoside-diphosphate-sugar epimerase [Ralstonia eutropha H16] Length = 250 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 207/248 (83%), Positives = 229/248 (92%) Query: 1 MKIVVIGGTGLIGSKTVAILRQRGHEVVAASPKNGINAITSEGLKEALAGAAVVIDLANS 60 MKIVVIGGTGLIGSKTVAILRQ GHEVVAASP++G+N+IT EGL+EALAG VVIDLANS Sbjct: 1 MKIVVIGGTGLIGSKTVAILRQGGHEVVAASPRSGVNSITGEGLQEALAGTQVVIDLANS 60 Query: 61 PSFEDKAVMEFFETSGRNLLAAEKPAGVRHHVALSIVGTDRTPENGYFRAKVAQEKLIEA 120 PSFEDKAV+EFFETSGRNL AAE AGV+HHVALSIVGTDRTPENGYFRAKVAQEKLIEA Sbjct: 61 PSFEDKAVLEFFETSGRNLHAAETKAGVQHHVALSIVGTDRTPENGYFRAKVAQEKLIEA 120 Query: 121 SGIAYTIIRATQFMEFVGAIADASAVGNTVRLSPGLFQPIAAEDVSALVADIALEPPRNG 180 S I YTIIR+TQFMEF+G IAD+SA GN V LSPGLFQPIAA+DV+A+VAD+AL PPRNG Sbjct: 121 SSIPYTIIRSTQFMEFIGGIADSSAQGNIVSLSPGLFQPIAADDVAAIVADVALAPPRNG 180 Query: 181 IVEIAGPDRAPFNEIVARYLKAKGDPREVVKDPDALYWGGRVEQHSLVPLGEARLGGIDL 240 IVEIAGP+RAPFNEIVARYLKA GDPREVV+DP+A Y+GGRVE+HSLVPLGEARLG I L Sbjct: 181 IVEIAGPERAPFNEIVARYLKAVGDPREVVRDPEARYFGGRVEEHSLVPLGEARLGRIGL 240 Query: 241 NEWLRRAR 248 EWLR+++ Sbjct: 241 EEWLRQSQ 248 >ref|YP_004682228.1| hypothetical protein CNE_2c20450 [Cupriavidus necator N-1] gb|AEI80996.1| nucleoside-diphosphate-sugar epimerase [Cupriavidus necator N-1] Length = 250 Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust. Identities = 207/248 (83%), Positives = 229/248 (92%) Query: 1 MKIVVIGGTGLIGSKTVAILRQRGHEVVAASPKNGINAITSEGLKEALAGAAVVIDLANS 60 MKIV+IGGTGLIGSKTVAILRQ GHEVVAASPK+G+N+IT EGL+EALAG VVIDLANS Sbjct: 1 MKIVIIGGTGLIGSKTVAILRQGGHEVVAASPKSGVNSITGEGLQEALAGTQVVIDLANS 60 Query: 61 PSFEDKAVMEFFETSGRNLLAAEKPAGVRHHVALSIVGTDRTPENGYFRAKVAQEKLIEA 120 PSFEDKAV+EFFETSGRNL AAE AGV+HHVALSIVGTDRTPENGYFRAKVAQEKLIEA Sbjct: 61 PSFEDKAVLEFFETSGRNLHAAETKAGVQHHVALSIVGTDRTPENGYFRAKVAQEKLIEA 120 Query: 121 SGIAYTIIRATQFMEFVGAIADASAVGNTVRLSPGLFQPIAAEDVSALVADIALEPPRNG 180 SGI YTIIR+TQFMEF+G IAD+SA GN V LS GLFQPIAA+DV+A+VAD+AL PPRNG Sbjct: 121 SGIPYTIIRSTQFMEFIGGIADSSAQGNVVHLSRGLFQPIAADDVAAIVADVALAPPRNG 180 Query: 181 IVEIAGPDRAPFNEIVARYLKAKGDPREVVKDPDALYWGGRVEQHSLVPLGEARLGGIDL 240 IVEIAGP+RAPFNEIVARYLKA GDPREVV+DP+A Y+GGRVE+HSLVPLGEARLG I L Sbjct: 181 IVEIAGPERAPFNEIVARYLKAVGDPREVVRDPEARYFGGRVEEHSLVPLGEARLGRIGL 240 Query: 241 NEWLRRAR 248 EWLR+++ Sbjct: 241 EEWLRQSQ 248 >ref|ZP_03697442.1| NmrA family protein [Lutiella nitroferrum 2002] gb|EEG09928.1| NmrA family protein [Lutiella nitroferrum 2002] Length = 251 Score = 392 bits (1006), Expect = e-107, Method: Compositional matrix adjust. Identities = 194/251 (77%), Positives = 223/251 (88%) Query: 1 MKIVVIGGTGLIGSKTVAILRQRGHEVVAASPKNGINAITSEGLKEALAGAAVVIDLANS 60 MKIVVIGGTGLIGSKTV ILRQ GHEVVAASPK+G+N IT GL+EA++GA VVIDL+N+ Sbjct: 1 MKIVVIGGTGLIGSKTVPILRQAGHEVVAASPKSGVNTITGVGLQEAMSGAQVVIDLSNA 60 Query: 61 PSFEDKAVMEFFETSGRNLLAAEKPAGVRHHVALSIVGTDRTPENGYFRAKVAQEKLIEA 120 PS+ED+AV+EFF+TSGRN+ AAE AGV+HHVALSIVGTDR P NGYFRAKVAQEKL EA Sbjct: 61 PSWEDQAVLEFFQTSGRNVHAAEAAAGVQHHVALSIVGTDRMPGNGYFRAKVAQEKLTEA 120 Query: 121 SGIAYTIIRATQFMEFVGAIADASAVGNTVRLSPGLFQPIAAEDVSALVADIALEPPRNG 180 SGI YTIIR+TQFMEF+G IAD+S GNTVRL+PGLFQ IA++DV+ALVAD+AL PR+G Sbjct: 121 SGIPYTIIRSTQFMEFLGGIADSSTDGNTVRLAPGLFQAIASDDVAALVADVALTAPRSG 180 Query: 181 IVEIAGPDRAPFNEIVARYLKAKGDPREVVKDPDALYWGGRVEQHSLVPLGEARLGGIDL 240 IVEIAGP RAPFNEIVARYLKA GD REVV DP+A Y+GGRVE++SLVPLGEARLG I L Sbjct: 181 IVEIAGPGRAPFNEIVARYLKAIGDRREVVSDPEARYFGGRVEEYSLVPLGEARLGSIGL 240 Query: 241 NEWLRRARPAA 251 +EWLRR++ A Sbjct: 241 DEWLRRSQAGA 251 >ref|YP_001861698.1| NmrA family protein [Burkholderia phymatum STM815] gb|ACC74652.1| NmrA family protein [Burkholderia phymatum STM815] Length = 251 Score = 390 bits (1002), Expect = e-106, Method: Compositional matrix adjust. Identities = 190/247 (76%), Positives = 221/247 (89%) Query: 1 MKIVVIGGTGLIGSKTVAILRQRGHEVVAASPKNGINAITSEGLKEALAGAAVVIDLANS 60 MKIV+IGGTGLIGSKT AILRQ GH+V +ASP++G+N IT EGLKEALAGA V+IDL+NS Sbjct: 1 MKIVIIGGTGLIGSKTAAILRQAGHDVASASPRSGVNTITGEGLKEALAGADVLIDLSNS 60 Query: 61 PSFEDKAVMEFFETSGRNLLAAEKPAGVRHHVALSIVGTDRTPENGYFRAKVAQEKLIEA 120 PSFEDKAV+EFFETSGRNL AAE AGVRHHVALSIVGTDRTPENGYFRAKVAQEKLI A Sbjct: 61 PSFEDKAVLEFFETSGRNLRAAETEAGVRHHVALSIVGTDRTPENGYFRAKVAQEKLIAA 120 Query: 121 SGIAYTIIRATQFMEFVGAIADASAVGNTVRLSPGLFQPIAAEDVSALVADIALEPPRNG 180 SGI YTI+R+TQF EF+G IAD+S VG+TVRLSPGLFQPIAA+DV++ VAD AL PRNG Sbjct: 121 SGIPYTIVRSTQFYEFLGGIADSSVVGDTVRLSPGLFQPIAADDVASFVADAALAAPRNG 180 Query: 181 IVEIAGPDRAPFNEIVARYLKAKGDPREVVKDPDALYWGGRVEQHSLVPLGEARLGGIDL 240 IV+IAGP+RAPF+EI+ARYLK GD R+VV+DP+A Y+GG V++HSLVPLG+A +G I L Sbjct: 181 IVDIAGPERAPFDEIIARYLKTVGDRRKVVRDPEARYFGGLVDEHSLVPLGDALIGRIGL 240 Query: 241 NEWLRRA 247 +EWLRR+ Sbjct: 241 DEWLRRS 247