BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0106.0071.p (173 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767805.1| hypothetical protein blr1165 [Bradyrhizobium ja... 258 2e-67 ref|YP_004107347.1| hypothetical protein Rpdx1_0987 [Rhodopseudo... 254 5e-66 ref|YP_530621.1| apple domain-containing protein [Rhodopseudomon... 251 3e-65 ref|YP_488190.1| apple PAN precursor [Rhodopseudomonas palustris... 246 6e-64 ref|YP_001208533.1| hypothetical protein BRADO6717 [Bradyrhizobi... 244 3e-63 >ref|NP_767805.1| hypothetical protein blr1165 [Bradyrhizobium japonicum USDA 110] dbj|BAC46430.1| blr1165 [Bradyrhizobium japonicum USDA 110] Length = 190 Score = 258 bits (659), Expect = 2e-67, Method: Compositional matrix adjust. Identities = 125/171 (73%), Positives = 143/171 (83%), Gaps = 1/171 (0%) Query: 3 AVLAAAVVARPALAQTNFDRPGGDYLNAPVTTGDPADCALTCERDRRCRAWSFNYPTDAN 62 A+L+ + + PA AQT FDRPGGDY + PVT+GDP DCAL CERDRRCR+WSF+YP Sbjct: 21 ALLSLVLASWPARAQTAFDRPGGDYFSTPVTSGDPEDCALLCERDRRCRSWSFSYPDIDG 80 Query: 63 NGAVCWLKSTVPPRVQNVCCVSGVRGAGVVEPRNGAIETSIDRLGGDYKNFELKGSDGGD 122 GAVCWLK+TVPPRV CC+SGVRGAGV+EPR +ETSIDR GGD +NFELK + G+ Sbjct: 81 AGAVCWLKNTVPPRVPGNCCISGVRGAGVIEPRVEGVETSIDRPGGDLRNFELKDGE-GE 139 Query: 123 EACQAACTADNKCRAWTYARPGYAGRDAHCFLKKEIKPPRRKAGFTSGVVR 173 EAC+AACTADNKCRA+TYARPGY GR+A CFLKKEIKPPRRKAGFTSGVVR Sbjct: 140 EACKAACTADNKCRAFTYARPGYTGREARCFLKKEIKPPRRKAGFTSGVVR 190 >ref|YP_004107347.1| hypothetical protein Rpdx1_0987 [Rhodopseudomonas palustris DX-1] gb|ADU42614.1| hypothetical protein Rpdx1_0987 [Rhodopseudomonas palustris DX-1] Length = 172 Score = 254 bits (648), Expect = 5e-66, Method: Compositional matrix adjust. Identities = 120/173 (69%), Positives = 139/173 (80%), Gaps = 1/173 (0%) Query: 1 MFAVLAAAVVARPALAQTNFDRPGGDYLNAPVTTGDPADCALTCERDRRCRAWSFNYPTD 60 M AV AAA+ + AQ N DR GGDYL PVT+GDPA+CAL CERD+RCR+W+F+YP Sbjct: 1 MLAVAAAALSPHASHAQANIDRIGGDYLRTPVTSGDPAECALMCERDKRCRSWTFSYPRS 60 Query: 61 ANNGAVCWLKSTVPPRVQNVCCVSGVRGAGVVEPRNGAIETSIDRLGGDYKNFELKGSDG 120 +GA+CWLKSTVPPR N CCVSGVRGAGV+EPRN + E SIDR GGDY+NFELK + Sbjct: 61 PEDGAMCWLKSTVPPRTPNSCCVSGVRGAGVLEPRNDSNEVSIDRFGGDYRNFELKSGE- 119 Query: 121 GDEACQAACTADNKCRAWTYARPGYAGRDAHCFLKKEIKPPRRKAGFTSGVVR 173 GDEAC+AAC ++KCRAWTYARPGY GR+A CFLK +IKPPRRK GF SGVVR Sbjct: 120 GDEACKAACVDEHKCRAWTYARPGYVGRNARCFLKSQIKPPRRKPGFISGVVR 172 >ref|YP_530621.1| apple domain-containing protein [Rhodopseudomonas palustris BisB18] gb|ABD86302.1| Apple [Rhodopseudomonas palustris BisB18] Length = 191 Score = 251 bits (641), Expect = 3e-65, Method: Compositional matrix adjust. Identities = 118/162 (72%), Positives = 136/162 (83%), Gaps = 1/162 (0%) Query: 12 RPALAQTNFDRPGGDYLNAPVTTGDPADCALTCERDRRCRAWSFNYPTDANNGAVCWLKS 71 +PA AQ NFDRPGGDY +++GDPADCA+ CERDRRCR+WSF YPT GA CWLK+ Sbjct: 31 QPASAQANFDRPGGDYSRTAISSGDPADCAIVCERDRRCRSWSFAYPTAPEAGASCWLKN 90 Query: 72 TVPPRVQNVCCVSGVRGAGVVEPRNGAIETSIDRLGGDYKNFELKGSDGGDEACQAACTA 131 +VPPRV++ CCVSGVRGAGV+EPRN A+E +IDR GGDYKNF+LK + GDEAC+AAC Sbjct: 91 SVPPRVESGCCVSGVRGAGVLEPRNSAMEAAIDRYGGDYKNFDLKRGE-GDEACKAACAD 149 Query: 132 DNKCRAWTYARPGYAGRDAHCFLKKEIKPPRRKAGFTSGVVR 173 DN CRAWTYARPGY GRDAHCFLKK+IKPPRRK GF SGV+R Sbjct: 150 DNNCRAWTYARPGYVGRDAHCFLKKDIKPPRRKPGFISGVLR 191 >ref|YP_488190.1| apple PAN precursor [Rhodopseudomonas palustris HaA2] gb|ABD09279.1| apple PAN precursor [Rhodopseudomonas palustris HaA2] Length = 172 Score = 246 bits (629), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 118/162 (72%), Positives = 132/162 (81%), Gaps = 1/162 (0%) Query: 12 RPALAQTNFDRPGGDYLNAPVTTGDPADCALTCERDRRCRAWSFNYPTDANNGAVCWLKS 71 R A AQ NFDRPG DYL APV + DPADCAL CERDRRCR+W+F YP +GAVCWLK Sbjct: 12 RVAQAQANFDRPGADYLRAPVASNDPADCALMCERDRRCRSWTFAYPQAPEDGAVCWLKG 71 Query: 72 TVPPRVQNVCCVSGVRGAGVVEPRNGAIETSIDRLGGDYKNFELKGSDGGDEACQAACTA 131 +VP R N CCVSGVRGAGV+EPR GAIE SIDR GGDY+NFELK ++ GDEAC+AAC Sbjct: 72 SVPQRTPNNCCVSGVRGAGVLEPRTGAIEASIDRFGGDYRNFELKHNE-GDEACKAACEQ 130 Query: 132 DNKCRAWTYARPGYAGRDAHCFLKKEIKPPRRKAGFTSGVVR 173 DNKCRAWTYARPGY GR+A CFLK ++KPP+RK GF SGVVR Sbjct: 131 DNKCRAWTYARPGYVGRNARCFLKSQVKPPQRKPGFFSGVVR 172 >ref|YP_001208533.1| hypothetical protein BRADO6717 [Bradyrhizobium sp. ORS 278] emb|CAL80318.1| conserved hypothetical protein; putative secreted protein [Bradyrhizobium sp. ORS 278] Length = 212 Score = 244 bits (624), Expect = 3e-63, Method: Compositional matrix adjust. Identities = 123/201 (61%), Positives = 143/201 (71%), Gaps = 32/201 (15%) Query: 5 LAAAVVARPALAQTNFDRPGGDYLNAPVTTGDPADCALTCERDRRCRAWSFNYPTDANNG 64 L AA+ P AQT DRPGGDY++AP+ +GDPADCAL CE DRRCRAWSFNYPT G Sbjct: 12 LLAALCLTPVSAQTYSDRPGGDYMSAPIESGDPADCALLCEHDRRCRAWSFNYPTVMEAG 71 Query: 65 AVCWLKSTVPPRVQNVCCVSGVRGAGVVEPRNGAIETSIDRLGGDYKNFELKGSD----- 119 AVCWLK++VP RV + CCVSGVRGAGVVE RN A+ETSIDR GGDY++F++K +D Sbjct: 72 AVCWLKNSVPARVPDNCCVSGVRGAGVVEIRNDAVETSIDRPGGDYRSFDIKTTDLKAND 131 Query: 120 ---------------------------GGDEACQAACTADNKCRAWTYARPGYAGRDAHC 152 +E C+AACT DNKCRAWT+ARPGYAG++AHC Sbjct: 132 KIEKPAEKAADKAADTKAPDKKDEKAADAEEICKAACTGDNKCRAWTFARPGYAGKEAHC 191 Query: 153 FLKKEIKPPRRKAGFTSGVVR 173 FLKKEIKPPRR+AGFTSGVVR Sbjct: 192 FLKKEIKPPRRRAGFTSGVVR 212