BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0106.0070.p         (146 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_767806.1| hypothetical protein bll1166 [Bradyrhizobium ja...   233   6e-60
ref|YP_001236990.1| hypothetical protein BBta_0822 [Bradyrhizobi...   214   3e-54
gb|AAC43987.2| unknown [Bradyrhizobium japonicum]                     203   6e-51
ref|YP_001208530.1| hypothetical protein BRADO6714 [Bradyrhizobi...   188   2e-46
ref|YP_001411972.1| hypothetical protein Plav_0692 [Parvibaculum...   170   6e-41

>ref|NP_767806.1| hypothetical protein bll1166 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC46431.1| bll1166 [Bradyrhizobium japonicum USDA 110]
          Length = 188

 Score =  233 bits (595), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 108/140 (77%), Positives = 125/140 (89%)

Query: 7   RPLDYGISDHDIFYFDPDTSWEAEDAVIRELKARLGHLGVAIEVRNQARVHLWYPEKHGL 66
           R +D+GI+D+D+FYFDPDTSWEAEDAVIR+L+ARL HLGV +E+RNQARVHLWYP+KHGL
Sbjct: 49  RAVDHGIADYDVFYFDPDTSWEAEDAVIRKLQARLAHLGVKVEIRNQARVHLWYPDKHGL 108

Query: 67  PYPALSRSTDGIDRFLTENTQIGIRRTTRGYDVYAPNGFDDVAGMIVRPNRTPNFSPANY 126
           PYP L+RSTDGIDRFLTENTQ+GI+     +DVYAP+GFDDVA +IVRPNR  NFS ANY
Sbjct: 109 PYPPLTRSTDGIDRFLTENTQLGIQPAGGSFDVYAPHGFDDVARLIVRPNRAQNFSIANY 168

Query: 127 ATKAERWKALWPELTVLAAE 146
           A KA RWKALWPELTV+AAE
Sbjct: 169 AAKAARWKALWPELTVIAAE 188


>ref|YP_001236990.1| hypothetical protein BBta_0822 [Bradyrhizobium sp. BTAi1]
 gb|ABQ33084.1| hypothetical protein BBta_0822 [Bradyrhizobium sp. BTAi1]
          Length = 189

 Score =  214 bits (545), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 99/140 (70%), Positives = 115/140 (82%)

Query: 7   RPLDYGISDHDIFYFDPDTSWEAEDAVIRELKARLGHLGVAIEVRNQARVHLWYPEKHGL 66
           RP+D+GI D+D+FY DPDTSWEAEDAVI+ + + L  +   +EVRNQARVHLWYP KHG 
Sbjct: 49  RPVDHGILDYDVFYSDPDTSWEAEDAVIKLVASLLAGIDAKVEVRNQARVHLWYPAKHGR 108

Query: 67  PYPALSRSTDGIDRFLTENTQIGIRRTTRGYDVYAPNGFDDVAGMIVRPNRTPNFSPANY 126
           PYP L+RSTDGIDRFLT NTQ+G+R    GY+VYAP GFDD+A MIVRPN T NFS ANY
Sbjct: 109 PYPPLTRSTDGIDRFLTTNTQVGLRPVAGGYEVYAPKGFDDIAQMIVRPNITANFSAANY 168

Query: 127 ATKAERWKALWPELTVLAAE 146
           A KA RWKALWPE+TV+AAE
Sbjct: 169 AAKASRWKALWPEITVIAAE 188


>gb|AAC43987.2| unknown [Bradyrhizobium japonicum]
          Length = 375

 Score =  203 bits (517), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 93/124 (75%), Positives = 109/124 (87%)

Query: 7   RPLDYGISDHDIFYFDPDTSWEAEDAVIRELKARLGHLGVAIEVRNQARVHLWYPEKHGL 66
           R +D+GI+D+D+FYFDPDTSWEAEDAVIR+L+ARL HLGV +E+RNQARVHLWYP+KHGL
Sbjct: 90  RAVDHGIADYDVFYFDPDTSWEAEDAVIRKLQARLAHLGVKVEIRNQARVHLWYPDKHGL 149

Query: 67  PYPALSRSTDGIDRFLTENTQIGIRRTTRGYDVYAPNGFDDVAGMIVRPNRTPNFSPANY 126
           PYP L+RSTDGIDRFLTENTQ+GI+     +DVYAP+GFDDVA +IVRPNR  NFS ANY
Sbjct: 150 PYPPLTRSTDGIDRFLTENTQLGIQPAGGSFDVYAPHGFDDVARLIVRPNRAQNFSIANY 209

Query: 127 ATKA 130
           A K 
Sbjct: 210 AAKG 213


>ref|YP_001208530.1| hypothetical protein BRADO6714 [Bradyrhizobium sp. ORS 278]
 emb|CAL80315.1| conserved hypothetical protein [Bradyrhizobium sp. ORS 278]
          Length = 189

 Score =  188 bits (478), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 92/140 (65%), Positives = 112/140 (80%)

Query: 7   RPLDYGISDHDIFYFDPDTSWEAEDAVIRELKARLGHLGVAIEVRNQARVHLWYPEKHGL 66
           RP+D+GI D+D+FY DPDT+WEAEDAVI+ + A+L  +   +EVRNQARVHLWYP KHG 
Sbjct: 49  RPVDHGILDYDVFYSDPDTTWEAEDAVIKRVAAQLTGVDAKVEVRNQARVHLWYPAKHGR 108

Query: 67  PYPALSRSTDGIDRFLTENTQIGIRRTTRGYDVYAPNGFDDVAGMIVRPNRTPNFSPANY 126
           PYPAL+ STDGIDRFLT NTQ+G+R    GY++YAP G  D+  MIVRPN T NF+ ANY
Sbjct: 109 PYPALTCSTDGIDRFLTANTQVGLRLVLDGYELYAPKGLSDIEKMIVRPNYTANFTAANY 168

Query: 127 ATKAERWKALWPELTVLAAE 146
           A KA RWKALWPE+TV+A +
Sbjct: 169 AAKAARWKALWPEITVIAPD 188


>ref|YP_001411972.1| hypothetical protein Plav_0692 [Parvibaculum lavamentivorans DS-1]
 gb|ABS62315.1| protein of unknown function DUF925 [Parvibaculum lavamentivorans
           DS-1]
          Length = 187

 Score =  170 bits (431), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 78/139 (56%), Positives = 95/139 (68%)

Query: 7   RPLDYGISDHDIFYFDPDTSWEAEDAVIRELKARLGHLGVAIEVRNQARVHLWYPEKHGL 66
           RP ++GI D+D+FYFDPDT W+AEDA IR  +      G+ +E+RNQARVH+WY EK G 
Sbjct: 49  RPPEHGIKDYDVFYFDPDTGWDAEDAAIRRCREMFLPHGIDVELRNQARVHIWYEEKFGT 108

Query: 67  PYPALSRSTDGIDRFLTENTQIGIRRTTRGYDVYAPNGFDDVAGMIVRPNRTPNFSPANY 126
           PYP L  S +GIDRFL     +GI       D+YAP GF D+A M +RPNR PNFS A Y
Sbjct: 109 PYPPLRSSAEGIDRFLAPACMVGISPGCGELDIYAPCGFGDIANMTIRPNRMPNFSAARY 168

Query: 127 ATKAERWKALWPELTVLAA 145
           A KA RWK  WPELT++ A
Sbjct: 169 AEKAARWKERWPELTIVEA 187