BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0106.0068.p (256 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767807.1| signal peptidase [Bradyrhizobium japonicum USDA... 423 e-116 ref|YP_001208529.1| signal peptidase I [Bradyrhizobium sp. ORS 2... 406 e-111 ref|YP_001236992.1| signal peptidase I [Bradyrhizobium sp. BTAi1... 405 e-111 gb|AAC43986.2| signal peptidase SipS [Bradyrhizobium japonicum] 397 e-109 ref|YP_575612.1| peptidase S26A, signal peptidase I [Nitrobacter... 396 e-108 >ref|NP_767807.1| signal peptidase [Bradyrhizobium japonicum USDA 110] dbj|BAC46432.1| signal peptidase [Bradyrhizobium japonicum USDA 110] Length = 259 Score = 423 bits (1087), Expect = e-116, Method: Compositional matrix adjust. Identities = 205/246 (83%), Positives = 221/246 (89%) Query: 11 KPTSWRGQAVQLAAIVAVVFLAKGAIAEPFYVPSGSMEPTLLIGDALVASKYPYGYGAAS 70 K + W GQ VQLA IVA VF+AKGA+AEPFYVPSGSMEPTLLIGDAL+ASK+PYGYG +S Sbjct: 14 KSSGWGGQLVQLAGIVAAVFIAKGALAEPFYVPSGSMEPTLLIGDALLASKFPYGYGTSS 73 Query: 71 LPIQITLPETGRVFGETPKRGDVVVFRWPGDRSQAWVKRVVGLPGDRIQMRQGQLFINDH 130 LPIQI LPE+GRVF ETPK+GDVVVFRWPGDRSQAWVKRVVGLPGDRIQMRQGQLFIND Sbjct: 74 LPIQINLPESGRVFAETPKQGDVVVFRWPGDRSQAWVKRVVGLPGDRIQMRQGQLFINDR 133 Query: 131 AATLKPDGTGFAEDDRGGGEEAYRYIETLPNGVNHAIFKIRDNGRLDNTQEVTVPPGKLF 190 A LKPDG G AEDD GG E AYRY+ETLPNGV+H IFK+RDNG LDNT EVTVP G LF Sbjct: 134 PAELKPDGIGAAEDDNGGSEPAYRYVETLPNGVSHLIFKMRDNGPLDNTPEVTVPAGHLF 193 Query: 191 VLGDNRDNSADSRVPVRDGGVGLLPIDNLIGRADAVVGSWDLGIRSQPVWTWLSGFRLAR 250 VLGDNRDNSADSRVP+R GGVGLLPIDNL+GRADAV+GSWDLG+R QPVWTWLSGFRLAR Sbjct: 194 VLGDNRDNSADSRVPLRSGGVGLLPIDNLVGRADAVLGSWDLGMRGQPVWTWLSGFRLAR 253 Query: 251 FFTSVQ 256 FFT+V Sbjct: 254 FFTAVH 259 >ref|YP_001208529.1| signal peptidase I [Bradyrhizobium sp. ORS 278] emb|CAL80314.1| signal peptidase I [Bradyrhizobium sp. ORS 278] Length = 263 Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust. Identities = 209/246 (84%), Positives = 225/246 (91%) Query: 11 KPTSWRGQAVQLAAIVAVVFLAKGAIAEPFYVPSGSMEPTLLIGDALVASKYPYGYGAAS 70 K T+W GQ QLAA+VAVVFLAKGAIAEPFYVPSGSMEPTLLIGDAL+ASK+PYGYG +S Sbjct: 18 KETTWGGQIAQLAAVVAVVFLAKGAIAEPFYVPSGSMEPTLLIGDALLASKFPYGYGTSS 77 Query: 71 LPIQITLPETGRVFGETPKRGDVVVFRWPGDRSQAWVKRVVGLPGDRIQMRQGQLFINDH 130 LP+QITLPETGR+FGETPKRGDVVVFRWPGD SQAWVKRVVGLPGDRIQMRQGQL+IN Sbjct: 78 LPMQITLPETGRLFGETPKRGDVVVFRWPGDTSQAWVKRVVGLPGDRIQMRQGQLYINGQ 137 Query: 131 AATLKPDGTGFAEDDRGGGEEAYRYIETLPNGVNHAIFKIRDNGRLDNTQEVTVPPGKLF 190 AA LKPDG G AEDD G E AYRYIETLPNGV+H IFK+RDNGRLDNT EVTVPPGKLF Sbjct: 138 AAQLKPDGIGDAEDDTGRNEPAYRYIETLPNGVSHLIFKMRDNGRLDNTPEVTVPPGKLF 197 Query: 191 VLGDNRDNSADSRVPVRDGGVGLLPIDNLIGRADAVVGSWDLGIRSQPVWTWLSGFRLAR 250 VLGDNRDNSADSRV +RDGGVGLLPIDNL+GRADAVVGSWDLG ++QPVW WLSGFRL R Sbjct: 198 VLGDNRDNSADSRVSLRDGGVGLLPIDNLVGRADAVVGSWDLGFKNQPVWAWLSGFRLDR 257 Query: 251 FFTSVQ 256 FFT+V+ Sbjct: 258 FFTAVR 263 >ref|YP_001236992.1| signal peptidase I [Bradyrhizobium sp. BTAi1] gb|ABQ33086.1| signal peptidase I, Serine peptidase, MEROPS family S26A [Bradyrhizobium sp. BTAi1] Length = 264 Score = 405 bits (1040), Expect = e-111, Method: Compositional matrix adjust. Identities = 205/244 (84%), Positives = 223/244 (91%) Query: 13 TSWRGQAVQLAAIVAVVFLAKGAIAEPFYVPSGSMEPTLLIGDALVASKYPYGYGAASLP 72 T+W GQ QLAA+V VVF+AKGAIAEPFYVPSGSMEPTLLIGDAL+ASK+PYGYG +SLP Sbjct: 21 TTWGGQLAQLAAVVLVVFVAKGAIAEPFYVPSGSMEPTLLIGDALLASKFPYGYGTSSLP 80 Query: 73 IQITLPETGRVFGETPKRGDVVVFRWPGDRSQAWVKRVVGLPGDRIQMRQGQLFINDHAA 132 +QITLPETGR+FGETPKRGDVVVFRWPGD SQAWVKRVVGLPGDRIQMRQGQL+IN AA Sbjct: 81 MQITLPETGRLFGETPKRGDVVVFRWPGDTSQAWVKRVVGLPGDRIQMRQGQLYINGEAA 140 Query: 133 TLKPDGTGFAEDDRGGGEEAYRYIETLPNGVNHAIFKIRDNGRLDNTQEVTVPPGKLFVL 192 LKPDG G AEDD G E AYRY+ETLPNGV+H IFK+RDNGRLDNT EVTVPPGKLFVL Sbjct: 141 ALKPDGIGDAEDDTGRNEPAYRYVETLPNGVSHLIFKMRDNGRLDNTPEVTVPPGKLFVL 200 Query: 193 GDNRDNSADSRVPVRDGGVGLLPIDNLIGRADAVVGSWDLGIRSQPVWTWLSGFRLARFF 252 GDNRDNSADSRV +RDGGVGLLPIDNL+GRADAVVGSWDLG ++QPVW WLSGFRL RFF Sbjct: 201 GDNRDNSADSRVSLRDGGVGLLPIDNLVGRADAVVGSWDLGFKNQPVWAWLSGFRLDRFF 260 Query: 253 TSVQ 256 T+V+ Sbjct: 261 TAVR 264 >gb|AAC43986.2| signal peptidase SipS [Bradyrhizobium japonicum] Length = 259 Score = 397 bits (1021), Expect = e-109, Method: Compositional matrix adjust. Identities = 202/246 (82%), Positives = 220/246 (89%) Query: 11 KPTSWRGQAVQLAAIVAVVFLAKGAIAEPFYVPSGSMEPTLLIGDALVASKYPYGYGAAS 70 K + W GQ VQLA IVA VF+AKGA+AEPFYVPSGSMEPTLLIGDAL+ASK+PYGYG +S Sbjct: 14 KSSGWGGQLVQLAGIVAAVFIAKGALAEPFYVPSGSMEPTLLIGDALLASKFPYGYGTSS 73 Query: 71 LPIQITLPETGRVFGETPKRGDVVVFRWPGDRSQAWVKRVVGLPGDRIQMRQGQLFINDH 130 LPIQI LPE+GRVF E PK+GDVVVFRWPGDRSQAWVKRVVGLPGDRIQMRQGQLFIND Sbjct: 74 LPIQINLPESGRVFAEAPKQGDVVVFRWPGDRSQAWVKRVVGLPGDRIQMRQGQLFINDR 133 Query: 131 AATLKPDGTGFAEDDRGGGEEAYRYIETLPNGVNHAIFKIRDNGRLDNTQEVTVPPGKLF 190 A LKPDG G AEDD GG E AYRY+ETLPNGV+H IFK+RDNG LDNT EVTVP G LF Sbjct: 134 PAELKPDGIGAAEDDNGGSEPAYRYVETLPNGVSHLIFKMRDNGPLDNTPEVTVPAGHLF 193 Query: 191 VLGDNRDNSADSRVPVRDGGVGLLPIDNLIGRADAVVGSWDLGIRSQPVWTWLSGFRLAR 250 VLGD+RD+SADSRVP+R GGVGLLPIDNL+GRADAV+GSWDLG+R QPVWTWLSGFRLAR Sbjct: 194 VLGDDRDDSADSRVPLRSGGVGLLPIDNLVGRADAVLGSWDLGMRGQPVWTWLSGFRLAR 253 Query: 251 FFTSVQ 256 FFT+V Sbjct: 254 FFTAVH 259 >ref|YP_575612.1| peptidase S26A, signal peptidase I [Nitrobacter hamburgensis X14] gb|ABE61152.1| signal peptidase I, Serine peptidase, MEROPS family S26A [Nitrobacter hamburgensis X14] Length = 255 Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust. Identities = 192/251 (76%), Positives = 213/251 (84%), Gaps = 3/251 (1%) Query: 9 TAKPTS---WRGQAVQLAAIVAVVFLAKGAIAEPFYVPSGSMEPTLLIGDALVASKYPYG 65 T+ P++ W GQ VQ+AAIV VV +AKGA+AEPFYVPS SMEPTLLIGDAL+ASKYPYG Sbjct: 5 TSTPSTVRRWGGQIVQIAAIVLVVLVAKGALAEPFYVPSASMEPTLLIGDALLASKYPYG 64 Query: 66 YGAASLPIQITLPETGRVFGETPKRGDVVVFRWPGDRSQAWVKRVVGLPGDRIQMRQGQL 125 Y ASLPI ++ PET RVFGE PKRGDVVVFRWPGDRSQ WVKRV+GLPGDRIQMR GQ+ Sbjct: 65 YSTASLPIHVSFPETSRVFGELPKRGDVVVFRWPGDRSQVWVKRVIGLPGDRIQMRGGQV 124 Query: 126 FINDHAATLKPDGTGFAEDDRGGGEEAYRYIETLPNGVNHAIFKIRDNGRLDNTQEVTVP 185 +IN A LKPDG G AEDD G E A RY+ETLP G++H IFKI DNGRLD+T EVTVP Sbjct: 125 WINGQATALKPDGLGEAEDDNGSSEPARRYVETLPGGISHPIFKIHDNGRLDDTVEVTVP 184 Query: 186 PGKLFVLGDNRDNSADSRVPVRDGGVGLLPIDNLIGRADAVVGSWDLGIRSQPVWTWLSG 245 PG LFV+GDNRDNSADSRVPV GGVGLLP DNL+GR DA+VGSWD+GIRSQPVWTWLSG Sbjct: 185 PGHLFVMGDNRDNSADSRVPVSQGGVGLLPTDNLVGRVDAIVGSWDMGIRSQPVWTWLSG 244 Query: 246 FRLARFFTSVQ 256 FRLARFFT+V Sbjct: 245 FRLARFFTAVH 255