BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0106.0064.p         (159 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|ZP_07025924.1| protein of unknown function DUF1791 [Afipia s...   127   7e-28
ref|YP_001242708.1| YchN-like domain-containing protein [Bradyrh...   121   4e-26
ref|YP_001203281.1| YchN-like [Bradyrhizobium sp. ORS 278] >gi|1...   119   1e-25
ref|NP_949812.1| hypothetical protein RPA4476 [Rhodopseudomonas ...   119   2e-25
ref|ZP_07027979.1| protein of unknown function DUF1791 [Afipia s...   118   4e-25

>ref|ZP_07025924.1| protein of unknown function DUF1791 [Afipia sp. 1NLS2]
 gb|EFI53066.1| protein of unknown function DUF1791 [Afipia sp. 1NLS2]
          Length = 140

 Score =  127 bits (318), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 58/123 (47%), Positives = 84/123 (68%)

Query: 36  EPRMHRLVLPINSDDPTTMRALISTALNLPKYYRERNEPFEIEVVAYNAGVHMLRADTSP 95
            PR H++V  IN+DD   M+ ++S ++NL + +R+  EP EIE+VAY AG+ M R D SP
Sbjct: 17  HPRAHQVVFQINADDVAPMKHVVSNSVNLVRNFRDTREPVEIEIVAYGAGIAMFREDKSP 76

Query: 96  VKDLLRVVRGLTPDIRFVVCEATKLGMERAEGHPLVLLDNVDLVPNGPGRIIELQEAGWS 155
           V D+L  +    P+I F VC ++K  +E+ EGHP+ L++   +VP G  RI+EL+EAGWS
Sbjct: 77  VGDVLEYIHTNFPEIAFTVCGSSKTIIEQREGHPMPLIEGTRIVPFGIVRIVELEEAGWS 136

Query: 156 YIR 158
           YIR
Sbjct: 137 YIR 139


>ref|YP_001242708.1| YchN-like domain-containing protein [Bradyrhizobium sp. BTAi1]
 gb|ABQ38802.1| putative exported protein of unknown function with YchN-like domain
           [Bradyrhizobium sp. BTAi1]
          Length = 151

 Score =  121 bits (303), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 60/151 (39%), Positives = 91/151 (60%), Gaps = 12/151 (7%)

Query: 10  AATMLLTGSVAAVSKPEPKKPESSKPEPRMHRLVLPINSDDPTTMRALISTALNLPKYYR 69
           AA  LL  S  A          S   E ++HR+ + ++ +DP  M   ++ A N+ + ++
Sbjct: 10  AACALLIASAGA----------SLSAEVKIHRVAIQVDQNDPAIMNLALNNASNIMETFK 59

Query: 70  ERNEPFEIEVVAYNAGVHMLRADTSPVKDLLRVVRGLT--PDIRFVVCEATKLGMERAEG 127
           E+ E  EIE+V Y  G++MLR DTSPVKD L+ +  L+    I+F  C  TK GME+ EG
Sbjct: 60  EKGEEVEIELVTYGPGLNMLREDTSPVKDRLKQIAELSFPAKIKFSACNITKRGMEKREG 119

Query: 128 HPLVLLDNVDLVPNGPGRIIELQEAGWSYIR 158
           HP+ ++    LVP+G  R++ELQE+GWSY++
Sbjct: 120 HPIAIVAEASLVPSGAVRLMELQESGWSYLK 150


>ref|YP_001203281.1| YchN-like [Bradyrhizobium sp. ORS 278]
 emb|CAL75044.1| conserved hypothetical protein; putative signal peptide; YchN-like
           [Bradyrhizobium sp. ORS 278]
          Length = 151

 Score =  119 bits (299), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 59/151 (39%), Positives = 92/151 (60%), Gaps = 12/151 (7%)

Query: 10  AATMLLTGSVAAVSKPEPKKPESSKPEPRMHRLVLPINSDDPTTMRALISTALNLPKYYR 69
           A+  LL  S+AA          S   + + HR+ + ++ +DP  M   ++ A N+ + ++
Sbjct: 10  ASCALLIASMAA----------SPAADVKTHRVAIQVDQNDPAVMNLALNNAANIMETFK 59

Query: 70  ERNEPFEIEVVAYNAGVHMLRADTSPVKDLLRVVRGLT--PDIRFVVCEATKLGMERAEG 127
           E+ E  EIE+V Y  G++MLR DTSPVKD L+ +  L+    I+F  C  TK GME+ EG
Sbjct: 60  EKGEEVEIEIVTYGPGLNMLREDTSPVKDRLKQIVELSFPAKIKFSACNITKRGMEKREG 119

Query: 128 HPLVLLDNVDLVPNGPGRIIELQEAGWSYIR 158
           HP+ ++    LVP+G  R++ELQE+GWSY++
Sbjct: 120 HPIEIVAQASLVPSGAVRLMELQESGWSYLK 150


>ref|NP_949812.1| hypothetical protein RPA4476 [Rhodopseudomonas palustris CGA009]
 emb|CAE29917.1| conserved unknown protein [Rhodopseudomonas palustris CGA009]
          Length = 170

 Score =  119 bits (297), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 51/121 (42%), Positives = 80/121 (66%), Gaps = 2/121 (1%)

Query: 40  HRLVLPINSDDPTTMRALISTALNLPKYYRERNEPFEIEVVAYNAGVHMLRADTSPVKDL 99
           HR+ + ++ +DP  M   ++ A N+ +YY+ +NE  ++EVV +  G+HMLR D+SPVKD 
Sbjct: 49  HRVAIQVDQNDPAVMNLALNNAANIIEYYKAKNEDVQVEVVTFGPGLHMLRTDSSPVKDR 108

Query: 100 LR-VVRGLTP-DIRFVVCEATKLGMERAEGHPLVLLDNVDLVPNGPGRIIELQEAGWSYI 157
           ++ +  G  P  I+F  CE TK GME+ EGH + L+     VP+G  R++ELQ+ GW+Y+
Sbjct: 109 IKQIADGAFPSSIKFAACENTKTGMEKHEGHAVSLIPQASAVPSGAVRLMELQDDGWAYL 168

Query: 158 R 158
           R
Sbjct: 169 R 169


>ref|ZP_07027979.1| protein of unknown function DUF1791 [Afipia sp. 1NLS2]
 gb|EFI50800.1| protein of unknown function DUF1791 [Afipia sp. 1NLS2]
          Length = 150

 Score =  118 bits (295), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 60/160 (37%), Positives = 93/160 (58%), Gaps = 19/160 (11%)

Query: 1   MVLAFAVPFAATMLLTGSVAAVSKPEPKKPESSKPEPRMHRLVLPINSDDPTTMRALIST 60
           +V AFAV F+   + + + AA +KP              HR+ + ++ +DP TM   ++ 
Sbjct: 7   LVAAFAVVFS---ISSAAFAADAKP--------------HRIAIQVDQNDPATMNLALNN 49

Query: 61  ALNLPKYYRERNEPFEIEVVAYNAGVHMLRADTSPVKDLLRVVRGLT--PDIRFVVCEAT 118
             N+ K+Y ++ E  E+EVVAY  G++M R D SPVKD L+ +  +     ++F  C  T
Sbjct: 50  VTNIMKHYGDKGETVEVEVVAYGPGLNMYRDDKSPVKDRLKQISEMAFPSKVKFSACNNT 109

Query: 119 KLGMERAEGHPLVLLDNVDLVPNGPGRIIELQEAGWSYIR 158
           K GME+ EGHP+ ++    LVP+G  R+ ELQE GW+YI+
Sbjct: 110 KQGMEKKEGHPITIVPEASLVPSGVVRLSELQEQGWTYIK 149