BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0106.0054.p (209 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_767814.1| cytochrome C oxidase assembly protein [Bradyrhi... 318 3e-85 ref|YP_001208521.1| cytochrome C oxidase assembly protein [Brady... 313 9e-84 ref|YP_001237000.1| cytochrome C oxidase assembly protein [Brady... 312 2e-83 ref|ZP_08628249.1| cytochrome oxidase biogenesis protein [Bradyr... 308 4e-82 ref|YP_534632.1| cytochrome C oxidase assembly protein [Rhodopse... 305 2e-81 >ref|NP_767814.1| cytochrome C oxidase assembly protein [Bradyrhizobium japonicum USDA 110] sp|P56939.1|COXZ_BRAJA RecName: Full=Cytochrome c oxidase assembly protein CtaG emb|CAB56822.1| putative heme A synthase or assembly protein [Bradyrhizobium japonicum] gb|AAF78812.1| CoxG [Bradyrhizobium japonicum] dbj|BAC46439.1| coxG [Bradyrhizobium japonicum USDA 110] Length = 214 Score = 318 bits (815), Expect = 3e-85, Method: Compositional matrix adjust. Identities = 151/202 (74%), Positives = 170/202 (84%) Query: 7 QQGEAAKVTRRTLTRDAVVASICGFVVVLMVGASYAAVPFYNWFCRTTGFNGTTQVATSV 66 Q A K + L RD +VASICG VV LMVGASYAAVPFYNWFCR TGFNGTTQVAT+ Sbjct: 11 QSRTARKGVGKGLGRDVLVASICGGVVALMVGASYAAVPFYNWFCRATGFNGTTQVATAA 70 Query: 67 PSDAPLDRTIAVSFDSNVAPGLPWKFEPEQNTIDVKIGQVVTVYYTVTNQSARTTTGQAS 126 P+ P+ R IAV FDSNVAPGLPWKFEPEQ+ I+V IGQV TV+YTVTNQ+ARTT GQA+ Sbjct: 71 PATGPIARKIAVRFDSNVAPGLPWKFEPEQSEIEVNIGQVTTVFYTVTNQAARTTAGQAA 130 Query: 127 YNVAPLTVGAYFQKINCFCFTEQTMAPGEKREMAVVFYVDPALARDSENDTLKTITLSYT 186 YNVAPLTVG+YFQKINCFCFTEQTMAPGEKREM VVFYVDP++A D END L TITLSYT Sbjct: 131 YNVAPLTVGSYFQKINCFCFTEQTMAPGEKREMPVVFYVDPSIADDHENDGLSTITLSYT 190 Query: 187 FFPVRDATPKPVAAGEAEQRKG 208 F+PV+D KP+A+GE ++RKG Sbjct: 191 FYPVKDPVVKPLASGEGDKRKG 212 >ref|YP_001208521.1| cytochrome C oxidase assembly protein [Bradyrhizobium sp. ORS 278] sp|A4Z2D0.1|COXZ_BRASO RecName: Full=Cytochrome c oxidase assembly protein CtaG emb|CAL80306.1| cytochrome c oxidase assembly protein [Bradyrhizobium sp. ORS 278] Length = 219 Score = 313 bits (803), Expect = 9e-84, Method: Compositional matrix adjust. Identities = 149/193 (77%), Positives = 163/193 (84%) Query: 16 RRTLTRDAVVASICGFVVVLMVGASYAAVPFYNWFCRTTGFNGTTQVATSVPSDAPLDRT 75 RR + RDA+V ICG VVVLM+GASYAAVPFYNWFCR TGFNGTTQVAT+ PS APL R Sbjct: 25 RRGIGRDALVGGICGAVVVLMIGASYAAVPFYNWFCRATGFNGTTQVATAAPSAAPLARR 84 Query: 76 IAVSFDSNVAPGLPWKFEPEQNTIDVKIGQVVTVYYTVTNQSARTTTGQASYNVAPLTVG 135 I V FD+NVA GLPWKFEPE+ I+V IG+VVTVYYTVTNQSARTT QA+YNV PLT G Sbjct: 85 IGVRFDANVAGGLPWKFEPEKTEIEVAIGEVVTVYYTVTNQSARTTMAQAAYNVTPLTSG 144 Query: 136 AYFQKINCFCFTEQTMAPGEKREMAVVFYVDPALARDSENDTLKTITLSYTFFPVRDATP 195 AYFQKINCFCFTEQTMAPGE REM VVFYVDPA+ D END L TITLSYTF+PVRDA P Sbjct: 145 AYFQKINCFCFTEQTMAPGETREMPVVFYVDPAITADHENDGLNTITLSYTFYPVRDAAP 204 Query: 196 KPVAAGEAEQRKG 208 KPVAAGE ++ +G Sbjct: 205 KPVAAGEPDKPRG 217 >ref|YP_001237000.1| cytochrome C oxidase assembly protein [Bradyrhizobium sp. BTAi1] sp|A5EAA0.1|COXZ_BRASB RecName: Full=Cytochrome c oxidase assembly protein CtaG gb|ABQ33094.1| cytochrome c oxidase assembly protein [Bradyrhizobium sp. BTAi1] Length = 216 Score = 312 bits (799), Expect = 2e-83, Method: Compositional matrix adjust. Identities = 153/203 (75%), Positives = 168/203 (82%), Gaps = 1/203 (0%) Query: 6 PQQGEAAKVTRRTLTRDAVVASICGFVVVLMVGASYAAVPFYNWFCRTTGFNGTTQVATS 65 P + AA RR + RDAVV ICG VVVLMVGASYAAVPFYNWFCR TGFNGTTQVATS Sbjct: 13 PAEQAAAPALRRGVGRDAVVGGICGTVVVLMVGASYAAVPFYNWFCRATGFNGTTQVATS 72 Query: 66 VPSDAPLDRTIAVSFDSNVAPGLPWKFEPEQNTIDVKIGQVVTVYYTVTNQSARTTTGQA 125 P+ APL R IAV FD+NVA GLPWKFE E+ I+V IG+VVTVYYTVTNQSARTT QA Sbjct: 73 APTSAPLARRIAVRFDTNVAGGLPWKFEAEKTEIEVAIGEVVTVYYTVTNQSARTTMAQA 132 Query: 126 SYNVAPLTVGAYFQKINCFCFTEQTMAPGEKREMAVVFYVDPALARDSENDTLKTITLSY 185 +YNV PLT G YFQKINCFCFTEQTMAPGE REM VVFYVDPA+ D END+LKTITLSY Sbjct: 133 AYNVTPLTSGVYFQKINCFCFTEQTMAPGETREMPVVFYVDPAITADHENDSLKTITLSY 192 Query: 186 TFFPVRDATPKPVAAGEAEQRKG 208 TF+PVR+A PKPVAAGE ++ +G Sbjct: 193 TFYPVREA-PKPVAAGEPDKPRG 214 >ref|ZP_08628249.1| cytochrome oxidase biogenesis protein [Bradyrhizobiaceae bacterium SG-6C] gb|EGP09158.1| cytochrome oxidase biogenesis protein [Bradyrhizobiaceae bacterium SG-6C] Length = 202 Score = 308 bits (788), Expect = 4e-82, Method: Compositional matrix adjust. Identities = 151/201 (75%), Positives = 168/201 (83%), Gaps = 3/201 (1%) Query: 8 QGEAAKVTRRTLTRDAVVASICGFVVVLMVGASYAAVPFYNWFCRTTGFNGTTQVATSVP 67 Q A+K R ++RD ++ASICGFVV MVGASYAAVPFYNWFCRTTGFNGTTQVATS P Sbjct: 3 QQPASKKPR--ISRDVMIASICGFVVAFMVGASYAAVPFYNWFCRTTGFNGTTQVATSTP 60 Query: 68 SDAPLDRTIAVSFDSNVAPGLPWKFEPEQNTIDVKIGQVVTVYYTVTNQSARTTTGQASY 127 + L+R I V FDSNV+ GLPWKF+PEQN I VKIG+VVTVYYTVTNQSAR TTG A+Y Sbjct: 61 EKS-LERRINVRFDSNVSGGLPWKFQPEQNEISVKIGEVVTVYYTVTNQSARATTGVAAY 119 Query: 128 NVAPLTVGAYFQKINCFCFTEQTMAPGEKREMAVVFYVDPALARDSENDTLKTITLSYTF 187 NVAPLTVGA+FQKINCFCFTEQ PGEKREMAVVFYVDPALA D E D L TITLSYTF Sbjct: 120 NVAPLTVGAFFQKINCFCFTEQAFGPGEKREMAVVFYVDPALAADREYDDLNTITLSYTF 179 Query: 188 FPVRDATPKPVAAGEAEQRKG 208 +PV+D PKP+AA E ++RKG Sbjct: 180 YPVKDPAPKPLAATETDKRKG 200 >ref|YP_534632.1| cytochrome C oxidase assembly protein [Rhodopseudomonas palustris BisB18] sp|Q20X23.1|COXZ_RHOPB RecName: Full=Cytochrome c oxidase assembly protein CtaG gb|ABD90313.1| cytochrome c oxidase assembly protein CtaG/Cox11 [Rhodopseudomonas palustris BisB18] Length = 206 Score = 305 bits (781), Expect = 2e-81, Method: Compositional matrix adjust. Identities = 152/195 (77%), Positives = 160/195 (82%), Gaps = 1/195 (0%) Query: 14 VTRRTLTRDAVVASICGFVVVLMVGASYAAVPFYNWFCRTTGFNGTTQVATSVPSDAPLD 73 V RR L RDA VASICG VV LMVGASYAAVPFYNWFCR TGFNGTTQVAT+ P APL Sbjct: 11 VPRRGLGRDATVASICGLVVALMVGASYAAVPFYNWFCRATGFNGTTQVATAAPIAAPLP 70 Query: 74 RTIAVSFDSNVAPGLPWKFEPEQNTIDVKIGQVVTVYYTVTNQSARTTTGQASYNVAPLT 133 R I V FDSNV GLPWKF PEQ I++ IGQVVTV+YTVTN SA TTGQA+YNVAPLT Sbjct: 71 RKITVRFDSNVN-GLPWKFTPEQTEIEIPIGQVVTVFYTVTNLSAHETTGQAAYNVAPLT 129 Query: 134 VGAYFQKINCFCFTEQTMAPGEKREMAVVFYVDPALARDSENDTLKTITLSYTFFPVRDA 193 VGAYFQKINCFCFTEQT A GE REM VVFYVDPALA D END L +ITLSYTF+PVR Sbjct: 130 VGAYFQKINCFCFTEQTFAAGETREMPVVFYVDPALAADPENDGLNSITLSYTFYPVRAP 189 Query: 194 TPKPVAAGEAEQRKG 208 TPKPVAAGE + RKG Sbjct: 190 TPKPVAAGEPDSRKG 204