BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0106.0047.p (424 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001207033.1| HlyD family multidrug resistance protein [Br... 511 e-143 ref|YP_001241454.1| HlyD family multidrug resistance protein pro... 469 e-130 ref|YP_002495659.1| secretion protein HlyD family protein [Methy... 406 e-111 ref|YP_001756272.1| secretion protein HlyD family protein [Methy... 375 e-102 ref|YP_004677304.1| Secretion protein HlyD family protein [Hypho... 357 3e-96 >ref|YP_001207033.1| HlyD family multidrug resistance protein [Bradyrhizobium sp. ORS 278] emb|CAL78816.1| putative Multidrug resistance protein (hlyD family), emrA-like [Bradyrhizobium sp. ORS 278] Length = 423 Score = 511 bits (1316), Expect = e-143, Method: Compositional matrix adjust. Identities = 267/375 (71%), Positives = 310/375 (82%), Gaps = 3/375 (0%) Query: 43 EHPAGKQPAPPAAVPPEVTGTAPKRGFLRRRPVISAIGAVLLTAAIGGGYLYMDYSGHFE 102 + P K PAP G P+RG LRR PV +A+G V+L AA GGY+Y D + HFE Sbjct: 49 QEPDQKAPAPEER---SEQGEKPRRGLLRRHPVGAAVGLVVLLAAAAGGYVYFDAASHFE 105 Query: 103 STDDAFIAARQSALAPKISGYITAVPVTDNQHVAAGDVIAQLDDRDYRVALAQAEAQVAA 162 STDDAFIAARQ ++APK+SGYIT+VPVTDNQHV AGDVIA++DDRDY+ ALAQAEAQV + Sbjct: 106 STDDAFIAARQFSIAPKVSGYITSVPVTDNQHVKAGDVIARIDDRDYKTALAQAEAQVRS 165 Query: 163 ARASIENVDAQLDVQQAQISANQAQVDQAQAALVFAQQQATRYQHLEQSGYGTVQNSEQF 222 A A+I N+DAQ+ VQQAQI+A QAQVDQ+QA L FAQQQA RYQ L ++G GTVQ+ +Q+ Sbjct: 166 AEAAIHNIDAQIAVQQAQITAGQAQVDQSQAGLTFAQQQADRYQQLARTGSGTVQSEQQY 225 Query: 223 TSQLHQQQAALLSAQATLNLAQRQVESLKAQRKSAVANLAQAEAQRDQAKLNLSYTTVTA 282 TSQL Q +AAL S+QA L +AQRQ+ESLKAQR+SA ANLAQA+AQRDQA+LNLSYT VTA Sbjct: 226 TSQLQQAKAALTSSQANLQVAQRQLESLKAQRESADANLAQAQAQRDQAQLNLSYTVVTA 285 Query: 283 AQPGRVVNLSAAVGQFAQAGTNLTMFVPDQTWVTANFKEIQLNKMRPGEKVTMKIDAYPG 342 AQPGRVVNLSAA GQFA GT L+MFVPD+ WVTANFKE QL++MRPG+ VT++IDAYP Sbjct: 286 AQPGRVVNLSAADGQFAAQGTALSMFVPDEVWVTANFKETQLDQMRPGQPVTLEIDAYPE 345 Query: 343 RTIQGHVESVQPGSGTAFSLLPAQNATGNYVKIVQRVPVKIVMDNPPADVALGPGMSVVP 402 R I+GHV SVQ GSG AFSLLP QNATGNYVKIVQRVPVKI MD+PP DVALGPGMSVVP Sbjct: 346 REIRGHVASVQSGSGPAFSLLPPQNATGNYVKIVQRVPVKIDMDDPPTDVALGPGMSVVP 405 Query: 403 TVRIDATPSLVERLE 417 TVR+D PSL ERL+ Sbjct: 406 TVRVDPKPSLYERLK 420 >ref|YP_001241454.1| HlyD family multidrug resistance protein protein [Bradyrhizobium sp. BTAi1] gb|ABQ37548.1| putative Multidrug resistance protein (hlyD family), emrA-like protein [Bradyrhizobium sp. BTAi1] Length = 346 Score = 469 bits (1206), Expect = e-130, Method: Compositional matrix adjust. Identities = 245/328 (74%), Positives = 282/328 (85%) Query: 92 YLYMDYSGHFESTDDAFIAARQSALAPKISGYITAVPVTDNQHVAAGDVIAQLDDRDYRV 151 Y+Y D + FESTDDAFIAARQ ++APK+SGYIT+VPVTDNQHV AGDVIA++D+RDYR Sbjct: 18 YVYYDAARRFESTDDAFIAARQFSIAPKVSGYITSVPVTDNQHVRAGDVIARIDERDYRT 77 Query: 152 ALAQAEAQVAAARASIENVDAQLDVQQAQISANQAQVDQAQAALVFAQQQATRYQHLEQS 211 ALAQAEAQV +A A+I N+DAQ+ VQQAQI A QAQV+QAQAAL FA+QQA RYQ L ++ Sbjct: 78 ALAQAEAQVRSAEAAIHNIDAQIAVQQAQIRAGQAQVEQAQAALTFAEQQAKRYQDLART 137 Query: 212 GYGTVQNSEQFTSQLHQQQAALLSAQATLNLAQRQVESLKAQRKSAVANLAQAEAQRDQA 271 G GTVQ+ +Q+TSQL QQ+AAL SAQA L +AQRQ+ESL AQR+SA ANLAQ +AQRDQA Sbjct: 138 GSGTVQSEQQYTSQLEQQKAALTSAQANLQVAQRQLESLNAQRESADANLAQVQAQRDQA 197 Query: 272 KLNLSYTTVTAAQPGRVVNLSAAVGQFAQAGTNLTMFVPDQTWVTANFKEIQLNKMRPGE 331 +LNLSYTTVTAAQPGR+VNLSAA GQFA GT L+MFVPD WVTANFKE QL++MRPG+ Sbjct: 198 QLNLSYTTVTAAQPGRIVNLSAADGQFAAQGTALSMFVPDDVWVTANFKETQLDQMRPGQ 257 Query: 332 KVTMKIDAYPGRTIQGHVESVQPGSGTAFSLLPAQNATGNYVKIVQRVPVKIVMDNPPAD 391 VT++IDAYP R I+GHV SVQ GSG AFSLLP QNATGNYVKIVQRVPVKI MD+PPAD Sbjct: 258 PVTLQIDAYPEREIRGHVASVQSGSGPAFSLLPPQNATGNYVKIVQRVPVKIEMDDPPAD 317 Query: 392 VALGPGMSVVPTVRIDATPSLVERLEKS 419 VALGPGMSVVPTVR++ PSL ERL S Sbjct: 318 VALGPGMSVVPTVRVNPKPSLYERLRAS 345 >ref|YP_002495659.1| secretion protein HlyD family protein [Methylobacterium nodulans ORS 2060] gb|ACL55356.1| secretion protein HlyD family protein [Methylobacterium nodulans ORS 2060] Length = 400 Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust. Identities = 229/391 (58%), Positives = 285/391 (72%), Gaps = 27/391 (6%) Query: 43 EHPAGKQPAPPAA-----VP------------PEVTGTAPK-RGF--------LRRRPVI 76 EH G+ P PAA +P PE TG++ RG +RR PV Sbjct: 9 EHRDGRSPDAPAARNRADLPRSHDATPSPDREPERTGSSRDGRGGRGEKTPSPIRRHPVW 68 Query: 77 SAIGAVLLTAAIGGGYLYMDYSGH-FESTDDAFIAARQSALAPKISGYITAVPVTDNQHV 135 A+GA+LL A G+ Y H +ESTDDAF+AARQ ++APK+SGY+ AVPVTDNQHV Sbjct: 69 FALGAILLVATGAAGFWYWLVFVHPYESTDDAFVAARQFSVAPKVSGYVVAVPVTDNQHV 128 Query: 136 AAGDVIAQLDDRDYRVALAQAEAQVAAARASIENVDAQLDVQQAQISANQAQVDQAQAAL 195 AG V+ Q+D RDY AL +A+AQVA+A A+I N+DAQ++ Q+ I+ +AQV+QA AAL Sbjct: 129 EAGSVLFQIDRRDYAAALREAQAQVASAEAAIRNIDAQIEAQRGSIAEAEAQVEQADAAL 188 Query: 196 VFAQQQATRYQHLEQSGYGTVQNSEQFTSQLHQQQAALLSAQATLNLAQRQVESLKAQRK 255 FA+Q+A RYQ L Q G G++Q S+Q TS L QQQA L A+A + +AQ+QV SL+AQR Sbjct: 189 AFARQEAARYQDLAQRGAGSIQQSQQSTSNLQQQQANLSRARAAVTVAQKQVGSLQAQRA 248 Query: 256 SAVANLAQAEAQRDQAKLNLSYTTVTAAQPGRVVNLSAAVGQFAQAGTNLTMFVPDQTWV 315 A A+LAQA AQ +QA+LNL YTTVTAAQ GRVV L+ AVGQ+AQAG L MFVPD W+ Sbjct: 249 GAEASLAQARAQEEQARLNLGYTTVTAAQAGRVVRLTGAVGQYAQAGQALGMFVPDDIWI 308 Query: 316 TANFKEIQLNKMRPGEKVTMKIDAYPGRTIQGHVESVQPGSGTAFSLLPAQNATGNYVKI 375 TANFKE Q+ MRPG+ V ++IDAYP RTI+G VESVQPGSGTAFSLLPA+NATGN+VK+ Sbjct: 309 TANFKETQITDMRPGQDVDVEIDAYPDRTIKGRVESVQPGSGTAFSLLPAENATGNFVKV 368 Query: 376 VQRVPVKIVMDNPPADVALGPGMSVVPTVRI 406 VQRVPVKIV+D+ P DVA+GPG+SVVPTVR+ Sbjct: 369 VQRVPVKIVVDHWPEDVAIGPGLSVVPTVRV 399 >ref|YP_001756272.1| secretion protein HlyD family protein [Methylobacterium radiotolerans JCM 2831] gb|ACB25589.1| secretion protein HlyD family protein [Methylobacterium radiotolerans JCM 2831] Length = 422 Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust. Identities = 194/338 (57%), Positives = 243/338 (71%), Gaps = 1/338 (0%) Query: 70 LRRRPVISAIGAVLLTAAIGGGYLYMDYSGH-FESTDDAFIAARQSALAPKISGYITAVP 128 LRR PV +G + + A G + Y H +ESTDDAF+ AR ++ PK+ GY+ VP Sbjct: 84 LRRHPVAFLLGGLAVVALCVGVFFYWLLYMHPYESTDDAFVDARSISIQPKVGGYLVDVP 143 Query: 129 VTDNQHVAAGDVIAQLDDRDYRVALAQAEAQVAAARASIENVDAQLDVQQAQISANQAQV 188 VTDNQHV AG ++ Q+ RDY +AL QA+AQVAA A I+N+DAQ+ Q A I ++AQV Sbjct: 144 VTDNQHVEAGQILFQVFQRDYDIALDQAKAQVAADEAGIKNIDAQIQAQYANIDVSKAQV 203 Query: 189 DQAQAALVFAQQQATRYQHLEQSGYGTVQNSEQFTSQLHQQQAALLSAQATLNLAQRQVE 248 A+AAL FAQ+ A RY+ L + G G+VQ S+ TS L Q+QAA+ SA A++ AQ+QV Sbjct: 204 ATAEAALKFAQEDAARYKDLAERGSGSVQQSQSATSTLQQRQAAVQSANASVVAAQKQVG 263 Query: 249 SLKAQRKSAVANLAQAEAQRDQAKLNLSYTTVTAAQPGRVVNLSAAVGQFAQAGTNLTMF 308 SL+AQ+ S A L + AQ +QA+LNL YTTV A Q GR+V L+ VGQ AQAG L MF Sbjct: 264 SLQAQKASTQAQLGRDRAQVEQAELNLGYTTVRAVQGGRIVRLTGGVGQLAQAGQTLAMF 323 Query: 309 VPDQTWVTANFKEIQLNKMRPGEKVTMKIDAYPGRTIQGHVESVQPGSGTAFSLLPAQNA 368 VPD WVTANFKE Q+ MR G+ V ++IDAYPGR IQG V SVQPGSGTAFSLLPAQNA Sbjct: 324 VPDDIWVTANFKETQITDMRQGQPVDIEIDAYPGRKIQGTVASVQPGSGTAFSLLPAQNA 383 Query: 369 TGNYVKIVQRVPVKIVMDNPPADVALGPGMSVVPTVRI 406 TGNYVK+ QR+PVKIV+ N P DV++GPGMS+VPTV + Sbjct: 384 TGNYVKVTQRIPVKIVVKNWPTDVSIGPGMSIVPTVTV 421 >ref|YP_004677304.1| Secretion protein HlyD family protein [Hyphomicrobium sp. MC1] emb|CCB66738.1| Secretion protein HlyD family protein [Hyphomicrobium sp. MC1] Length = 368 Score = 357 bits (915), Expect = 3e-96, Method: Compositional matrix adjust. Identities = 178/317 (56%), Positives = 238/317 (75%) Query: 90 GGYLYMDYSGHFESTDDAFIAARQSALAPKISGYITAVPVTDNQHVAAGDVIAQLDDRDY 149 G ++ + H+E TDDAFI ARQ A++ K++GYI AV VTDNQ V+AGD++ Q+D RDY Sbjct: 51 GVLVWWLNARHYEWTDDAFIDARQFAVSSKVAGYIDAVKVTDNQRVSAGDLLVQIDPRDY 110 Query: 150 RVALAQAEAQVAAARASIENVDAQLDVQQAQISANQAQVDQAQAALVFAQQQATRYQHLE 209 +LAQA+A+V+ A A++ N DAQ++ Q+AQ++A + Q +A AALVFA+Q+ R Q L Sbjct: 111 EASLAQAKARVSQAVATVGNEDAQIEAQKAQVTAAEQQKKEADAALVFAKQENDRAQALV 170 Query: 210 QSGYGTVQNSEQFTSQLHQQQAALLSAQATLNLAQRQVESLKAQRKSAVANLAQAEAQRD 269 +S GTV+ ++Q SQL Q QA A A++ ++Q+ +L AQ+ SA AN+ A+A Sbjct: 171 KSAVGTVERAQQTRSQLQQAQATSARAMASVEATKKQLTALLAQKVSAEANVEAAKADEA 230 Query: 270 QAKLNLSYTTVTAAQPGRVVNLSAAVGQFAQAGTNLTMFVPDQTWVTANFKEIQLNKMRP 329 A+LNLSYT VT+AQ G++V L+AA GQ+ Q G NL MFVP WVTANFKE Q+ MRP Sbjct: 231 LAELNLSYTHVTSAQSGKIVQLTAARGQYVQVGQNLMMFVPSHIWVTANFKETQITDMRP 290 Query: 330 GEKVTMKIDAYPGRTIQGHVESVQPGSGTAFSLLPAQNATGNYVKIVQRVPVKIVMDNPP 389 G+ V+++IDAYP R +GHV+S+Q GSGTAFSLLPA+NATGNYVK+VQRVPVKI +DNPP Sbjct: 291 GQPVSIEIDAYPNREFKGHVDSIQVGSGTAFSLLPAENATGNYVKVVQRVPVKIEIDNPP 350 Query: 390 ADVALGPGMSVVPTVRI 406 +DV LGPGMSVVP V++ Sbjct: 351 SDVTLGPGMSVVPEVKV 367