BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0106.0044.p (238 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_002494969.1| putative 5-amino-6-(5-phosphoribosylamino)ur... 282 3e-74 ref|YP_002501263.1| putative 5-amino-6-(5-phosphoribosylamino)ur... 272 3e-71 ref|NP_103564.1| riboflavin-specific deaminase [Mesorhizobium lo... 199 3e-49 ref|YP_004353263.1| hypothetical protein PSEBR_a2016 [Pseudomona... 199 3e-49 ref|YP_004141939.1| bifunctional deaminase-reductase domain-cont... 196 3e-48 >ref|YP_002494969.1| putative 5-amino-6-(5-phosphoribosylamino)uracil reductase [Methylobacterium nodulans ORS 2060] gb|ACL62477.1| putative 5-amino-6-(5-phosphoribosylamino)uracil reductase [Methylobacterium nodulans ORS 2060] Length = 240 Score = 282 bits (721), Expect = 3e-74, Method: Compositional matrix adjust. Identities = 146/237 (61%), Positives = 167/237 (70%) Query: 1 MRPHIICHMGTSIDGRLHPSRFTKAAAGIPADVLRSHYERIHDGFDADGWIIGRVTMNEM 60 MRP IICHM +SIDGRLHPSRFT AAG+ D LR HY+ + F A GW++GR TM E+ Sbjct: 1 MRPKIICHMVSSIDGRLHPSRFTVPAAGVDGDRLRRHYDEVAARFGAQGWMVGRKTMQEI 60 Query: 61 AKGTERHIANPPKLPREAHRGNRNGRKLAIGIDPSGRVHFGKDNVGGDHAVAVLGKQVSD 120 AKG R A RE GNR GR LA+ IDP GRVH+G+D+V GDH VAVL + VSD Sbjct: 61 AKGAARTPAGAGVSSREPFVGNRKGRDLAVAIDPHGRVHYGQDHVLGDHVVAVLSEAVSD 120 Query: 121 SHLAELREDGASYLFAGAKGDDLPGAMAQLASLFGARTLLLEGGGGINGAFLKHGLIDEF 180 ++LAELREDG SYLFAG G DL AM L FG T+LL+GG INGAFLK LIDE Sbjct: 121 AYLAELREDGVSYLFAGPDGTDLRRAMDALGQTFGVETILLQGGASINGAFLKQRLIDEI 180 Query: 181 STLIFPAVDGVAGSQSIVDYHGPDGDRPGAGQSLRLTHCETLEGGMVWLRHTVERAP 237 S LI PA+DG+AG SI Y G +RPGAGQ+LR H ETLEGGMVWLR+ VE AP Sbjct: 181 SLLIQPAIDGLAGVPSIFGYEGSADERPGAGQALRHLHTETLEGGMVWLRYRVEDAP 237 >ref|YP_002501263.1| putative 5-amino-6-(5-phosphoribosylamino)uracil reductase [Methylobacterium nodulans ORS 2060] gb|ACL60960.1| putative 5-amino-6-(5-phosphoribosylamino)uracil reductase [Methylobacterium nodulans ORS 2060] Length = 239 Score = 272 bits (696), Expect = 3e-71, Method: Compositional matrix adjust. Identities = 139/237 (58%), Positives = 169/237 (71%) Query: 1 MRPHIICHMGTSIDGRLHPSRFTKAAAGIPADVLRSHYERIHDGFDADGWIIGRVTMNEM 60 MRP IICHM +S+DGRL R+T A GI A +L HYE + + +GWI+GR TM E+ Sbjct: 1 MRPKIICHMVSSVDGRLLVGRWTPPAKGIEAGLLHRHYEEVAGCLNGEGWIVGRTTMAEI 60 Query: 61 AKGTERHIANPPKLPREAHRGNRNGRKLAIGIDPSGRVHFGKDNVGGDHAVAVLGKQVSD 120 AKG R +A P R H +R GR LA+ IDP G+VH+G+D+VGGDH VAVLG+ V+D Sbjct: 61 AKGKPRTLAAIPAELRGTHVADRKGRDLAVAIDPHGKVHYGQDDVGGDHVVAVLGEGVTD 120 Query: 121 SHLAELREDGASYLFAGAKGDDLPGAMAQLASLFGARTLLLEGGGGINGAFLKHGLIDEF 180 ++LAELREDG SYLFAG G DL GAMA L +FG TLLLEGGG INGAFLK GLIDE Sbjct: 121 AYLAELREDGVSYLFAGPDGHDLAGAMATLGEVFGVGTLLLEGGGAINGAFLKAGLIDEV 180 Query: 181 STLIFPAVDGVAGSQSIVDYHGPDGDRPGAGQSLRLTHCETLEGGMVWLRHTVERAP 237 S L+ PA+DG+AG SI DY G ++P AG++LR ETL+GG VWLR+ VE AP Sbjct: 181 SLLVHPAIDGLAGVPSIFDYRGAPDEKPAAGRALRHFRTETLDGGTVWLRYRVEDAP 237 >ref|NP_103564.1| riboflavin-specific deaminase [Mesorhizobium loti MAFF303099] dbj|BAB49350.1| probable riboflavin-specific deaminase [Mesorhizobium loti MAFF303099] Length = 232 Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 109/234 (46%), Positives = 144/234 (61%), Gaps = 6/234 (2%) Query: 1 MRPHIICHMGTSIDGRLHPSRFTKAAAGIPADVLRSHYERIHDGFDADGWIIGRVTMNEM 60 M+PHIICHM S+DG LHPSR+T + G A+ YE+IH DGWI+GRVTM EM Sbjct: 1 MKPHIICHMLASLDGGLHPSRYTASPDGTRAE-WSGLYEQIHGDLQGDGWIVGRVTMAEM 59 Query: 61 AKGTERHIANPPKLPREAHRGNRNGRKLAIGIDPSGRVHFGKDNVGGDHAVAVLGKQVSD 120 ++ A+ K+ R H R+ A+ +D SG++HF K +VGGDH V +LG+ V+D Sbjct: 60 SRAGAHPAAHTGKVERPHHFARRDAGTYAVALDASGKLHFAKPDVGGDHVVVLLGRDVAD 119 Query: 121 SHLAELREDGASYLFAGAKGDDLPGAMAQLASLFGARTLLLEGGGGINGAFLKHGLIDEF 180 SHLAEL DG SY+ + DL + L G R LLLEGG GING+F GL+DE Sbjct: 120 SHLAELAADGVSYIVSETAEIDLAAMLDVLGRELGIRRLLLEGGAGINGSFFAAGLVDEL 179 Query: 181 STLIFPAVDGVAGSQSIVDYHGPDGDRPGAGQ-SLRLTHCETLEGGMVWLRHTV 233 S L+ PA+D AG+Q V++ G+ AG+ L LT CETL G++ LR+ V Sbjct: 180 SLLVAPALDARAGNQGFVEF----GESGLAGKMQLSLTSCETLAHGLIHLRYAV 229 >ref|YP_004353263.1| hypothetical protein PSEBR_a2016 [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gb|AEA68259.1| conserved hypothetical protein [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length = 243 Score = 199 bits (506), Expect = 3e-49, Method: Compositional matrix adjust. Identities = 109/242 (45%), Positives = 148/242 (61%), Gaps = 11/242 (4%) Query: 1 MRPHIICHMGTSIDGRLHPSRFTKAAAGIPADVLRSHYERIHDGFDADGWIIGRVTMNEM 60 M P IICHM +S+DGRL SR+T G + +HYERI DG+IIGR TM Sbjct: 1 MPPRIICHMISSVDGRLVSSRWTSLPNGDSEQTISNHYERIAARLGGDGFIIGRKTMEAF 60 Query: 61 AKGTERHIANPPKL------PREAHRGNRNGRKLAIGIDPSGRVHFGKDNVGGDH-AVAV 113 + R PP + R+ + + G +AI IDPSG++H+ + + G H +++ Sbjct: 61 DGISSR----PPFVGEHSGGLRDHNIAHEPGDPVAIVIDPSGKLHYQTNTIDGGHRIISI 116 Query: 114 LGKQVSDSHLAELREDGASYLFAGAKGDDLPGAMAQLASLFGARTLLLEGGGGINGAFLK 173 LG VSD++L LR G SYLFAG ++L A+A L + FG +TLLLEGGG ING FLK Sbjct: 117 LGDSVSDAYLQALRNQGISYLFAGPHCENLKQALAMLGARFGLKTLLLEGGGVINGTFLK 176 Query: 174 HGLIDEFSTLIFPAVDGVAGSQSIVDYHGPDGDRPGAGQSLRLTHCETLEGGMVWLRHTV 233 GLIDE S LI+P +DG++G SI +YHG +RP +GQSLR +T+E G +W R+ V Sbjct: 177 AGLIDEISLLIYPGIDGLSGVPSIFEYHGQSDERPASGQSLRHISTQTIEDGFIWARYLV 236 Query: 234 ER 235 + Sbjct: 237 AK 238 >ref|YP_004141939.1| bifunctional deaminase-reductase domain-containing protein [Mesorhizobium ciceri biovar biserrulae WSM1271] gb|ADV11889.1| bifunctional deaminase-reductase domain protein [Mesorhizobium ciceri biovar biserrulae WSM1271] Length = 233 Score = 196 bits (498), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 108/235 (45%), Positives = 140/235 (59%), Gaps = 6/235 (2%) Query: 1 MRPHIICHMGTSIDGRLHPSRFTKAAAGIPADVLRSHYERIHDGFDADGWIIGRVTMNEM 60 M+P IICHM S+DG LHPSR+T + G A+ S YE IH+ AD WI+GRVTM EM Sbjct: 1 MKPQIICHMLASLDGSLHPSRYTSSPDGTRAE-WSSLYEHIHNDLAADAWIVGRVTMAEM 59 Query: 61 AKGTERHIANPPKLPREAHRGNRNGRKLAIGIDPSGRVHFGKDNVGGDHAVAVLGKQVSD 120 +K AN K+ R H A+ +D SG++HF K ++GGDH V +LG+ V+D Sbjct: 60 SKAGAHPPANAGKVDRPYHFAQIGAGSYAVALDASGKLHFSKPDIGGDHVVVLLGRDVAD 119 Query: 121 SHLAELREDGASYLFAGAKGDDLPGAMAQLASLFGARTLLLEGGGGINGAFLKHGLIDEF 180 SHLAEL DG SY+ A DL + L G LLLEGG ING+FL GL+DE Sbjct: 120 SHLAELAADGVSYIVAETGDIDLAAMLEVLGRELGISRLLLEGGASINGSFLAAGLVDEL 179 Query: 181 STLIFPAVDGVAGSQSIVDYHGPDGDRPGAGQS-LRLTHCETLEGGMVWLRHTVE 234 S L+ PA+DG A +Q V++ G+ AG++ L L CE L G+V LR+ V Sbjct: 180 SLLVAPAIDGRAANQGFVEF----GESGLAGKTQLSLKSCEALAHGLVHLRYAVS 230