BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0106.0036.p (314 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_774707.1| hypothetical protein bll8067 [Bradyrhizobium ja... 498 e-139 ref|ZP_01046774.1| hypothetical protein NB311A_13461 [Nitrobacte... 488 e-136 ref|NP_769723.1| hypothetical protein blr3083 [Bradyrhizobium ja... 486 e-135 ref|YP_001239639.1| hypothetical protein BBta_3649 [Bradyrhizobi... 486 e-135 ref|ZP_01048611.1| LpqO protein-like [Nitrobacter sp. Nb-311A] >... 470 e-130 >ref|NP_774707.1| hypothetical protein bll8067 [Bradyrhizobium japonicum USDA 110] dbj|BAC53332.1| bll8067 [Bradyrhizobium japonicum USDA 110] Length = 385 Score = 498 bits (1283), Expect = e-139, Method: Compositional matrix adjust. Identities = 239/281 (85%), Positives = 262/281 (93%) Query: 33 PFVSSAHAQAIDWQKVDDTLGRKPAVTGDVHRYGFPRSDLAVTLDGVTIKPALALGGWVA 92 PFV A AQAIDWQKVD+TLGRK AV+ DVHRYGFPRSDL+V+LDGVTIKP+LALGGWVA Sbjct: 104 PFVYMARAQAIDWQKVDETLGRKAAVSDDVHRYGFPRSDLSVSLDGVTIKPSLALGGWVA 163 Query: 93 FKPMHDGVMAMGDLVLLESEINPVMLKMISNGMQITAVHNHLLGASPATFYMHVAGHGDP 152 FKP H G M MGDLVLLE+EINPVM KMI+NG++ITAVHNHLL ASPATFYMHVAGHGDP Sbjct: 164 FKPGHGGAMVMGDLVLLETEINPVMAKMIANGLEITAVHNHLLRASPATFYMHVAGHGDP 223 Query: 153 VKIAAAIRDGLAESKTPLTAAAPAAPPPAIDLDTAQLDQIIGVKGQANGGVYQFNVPRRD 212 VK+++AI D LAESKTPLT APA+PPPA+DLDTA+LDQIIGVKGQANGGVYQFNV RRD Sbjct: 224 VKLSSAIHDALAESKTPLTVGAPASPPPAVDLDTAKLDQIIGVKGQANGGVYQFNVKRRD 283 Query: 213 PITEEGMALSPVGPLGVAIGINFQPTGGGKAAITGDFVLTNDEVNPVIMALRTHGIDVTA 272 PIT+EGM L+PVGP+GVAIGINFQPTGGG+AAITGDFVLT DEVNPVI+ALR HGI+VTA Sbjct: 284 PITQEGMPLTPVGPMGVAIGINFQPTGGGRAAITGDFVLTGDEVNPVILALRAHGIEVTA 343 Query: 273 LHSHMLDEQPRLFFMHFWANDDAVKLAKGLRAALDKTATTK 313 LHSHMLDEQPRLFFMHFWA+DDAVKLAKGLRAALDKTA+TK Sbjct: 344 LHSHMLDEQPRLFFMHFWASDDAVKLAKGLRAALDKTASTK 384 >ref|ZP_01046774.1| hypothetical protein NB311A_13461 [Nitrobacter sp. Nb-311A] gb|EAQ35327.1| hypothetical protein NB311A_13461 [Nitrobacter sp. Nb-311A] Length = 300 Score = 488 bits (1255), Expect = e-136, Method: Compositional matrix adjust. Identities = 238/314 (75%), Positives = 262/314 (83%), Gaps = 14/314 (4%) Query: 1 MRHTISALIGIGACLFATGGSAQKIDWQVFAEPFVSSAHAQAIDWQKVDDTLGRKPAVTG 60 MR+ +SALIGI AC A GSA D +DW KVD LGRKPAVT Sbjct: 1 MRNVLSALIGISACFMAVHGSAYAQD--------------HGVDWGKVDGILGRKPAVTE 46 Query: 61 DVHRYGFPRSDLAVTLDGVTIKPALALGGWVAFKPMHDGVMAMGDLVLLESEINPVMLKM 120 DVHRYGF R+DL VTLDGVTIKPALALGGW+AFK HDG MAMGDLVLLESEINPVMLKM Sbjct: 47 DVHRYGFSRTDLTVTLDGVTIKPALALGGWIAFKQAHDGAMAMGDLVLLESEINPVMLKM 106 Query: 121 ISNGMQITAVHNHLLGASPATFYMHVAGHGDPVKIAAAIRDGLAESKTPLTAAAPAAPPP 180 I+ G++ITA+HNHLL A+PATFYMHVAGHGDP K+A + D LAESKTPL A + PPP Sbjct: 107 IAGGLEITAIHNHLLRATPATFYMHVAGHGDPAKLATVLHDALAESKTPLQATPSSNPPP 166 Query: 181 AIDLDTAQLDQIIGVKGQANGGVYQFNVPRRDPITEEGMALSPVGPLGVAIGINFQPTGG 240 A+DLDTAQLDQIIGVKG+ NGGVYQFNVPRRDP++E GM L+P GP+GVAIGINFQPTGG Sbjct: 167 AVDLDTAQLDQIIGVKGKTNGGVYQFNVPRRDPVSEGGMTLTPAGPMGVAIGINFQPTGG 226 Query: 241 GKAAITGDFVLTNDEVNPVIMALRTHGIDVTALHSHMLDEQPRLFFMHFWANDDAVKLAK 300 GKAAITGDFVLT DEVNPV+ ALRTHGI+VTALHSHMLDEQPRLFFMHFWANDDA+KLAK Sbjct: 227 GKAAITGDFVLTGDEVNPVVAALRTHGIEVTALHSHMLDEQPRLFFMHFWANDDAIKLAK 286 Query: 301 GLRAALDKTATTKS 314 GLRAALDKTA+TK+ Sbjct: 287 GLRAALDKTASTKN 300 >ref|NP_769723.1| hypothetical protein blr3083 [Bradyrhizobium japonicum USDA 110] dbj|BAC48348.1| blr3083 [Bradyrhizobium japonicum USDA 110] Length = 317 Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust. Identities = 246/314 (78%), Positives = 269/314 (85%), Gaps = 19/314 (6%) Query: 1 MRHTISALIGIGACLFATGGSAQKIDWQVFAEPFVSSAHAQAIDWQKVDDTLGRKPAVTG 60 MR I L+GIGAC F+++AHAQ +DWQKVDD LGRKPAV G Sbjct: 23 MRSAILPLMGIGAC-------------------FIATAHAQDVDWQKVDDALGRKPAVAG 63 Query: 61 DVHRYGFPRSDLAVTLDGVTIKPALALGGWVAFKPMHDGVMAMGDLVLLESEINPVMLKM 120 DVHRYGFPR+DL VTLDGVTIKP+LALGGWVAFKP H VMAMGDLVLLESEINPVM KM Sbjct: 64 DVHRYGFPRTDLTVTLDGVTIKPSLALGGWVAFKPAHGAVMAMGDLVLLESEINPVMQKM 123 Query: 121 ISNGMQITAVHNHLLGASPATFYMHVAGHGDPVKIAAAIRDGLAESKTPLTAAAPAAPPP 180 I +G++ITAVHNHLLGA PATFYMHVAGHGDP+KIA AI+ LAESKTP++A APA PPP Sbjct: 124 IESGLEITAVHNHLLGAVPATFYMHVAGHGDPLKIATAIKTALAESKTPMSAPAPAVPPP 183 Query: 181 AIDLDTAQLDQIIGVKGQANGGVYQFNVPRRDPITEEGMALSPVGPLGVAIGINFQPTGG 240 AIDLDTA+LDQIIGVKGQANGGVYQFNVPRRDPITE GM LSPVGP+GVA G+NFQPTGG Sbjct: 184 AIDLDTAKLDQIIGVKGQANGGVYQFNVPRRDPITEHGMQLSPVGPMGVATGVNFQPTGG 243 Query: 241 GKAAITGDFVLTNDEVNPVIMALRTHGIDVTALHSHMLDEQPRLFFMHFWANDDAVKLAK 300 G+AAITGDFVL DEVNPVIMALR+HGI VTALHSHMLDEQPRLFFMHFWANDDA+KLA Sbjct: 244 GRAAITGDFVLIGDEVNPVIMALRSHGISVTALHSHMLDEQPRLFFMHFWANDDAIKLAN 303 Query: 301 GLRAALDKTATTKS 314 G+RAALDKTA+TK+ Sbjct: 304 GVRAALDKTASTKN 317 >ref|YP_001239639.1| hypothetical protein BBta_3649 [Bradyrhizobium sp. BTAi1] gb|ABQ35733.1| putative exported protein of unknown function [Bradyrhizobium sp. BTAi1] Length = 303 Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust. Identities = 238/314 (75%), Positives = 268/314 (85%), Gaps = 11/314 (3%) Query: 1 MRHTISALIGIGACLFATGGSAQKIDWQVFAEPFVSSAHAQAIDWQKVDDTLGRKPAVTG 60 MR I ALIGIGAC+ A +E S+AHAQ +DWQKVD+TLGRKPAV+ Sbjct: 1 MRKAILALIGIGACVLAPA-----------SEWLASAAHAQDVDWQKVDETLGRKPAVSD 49 Query: 61 DVHRYGFPRSDLAVTLDGVTIKPALALGGWVAFKPMHDGVMAMGDLVLLESEINPVMLKM 120 DVHRY FPR+DLAVTLDGV IKPALALGGW+AFKP H G M MGDLVLLE+EINPVM KM Sbjct: 50 DVHRYSFPRTDLAVTLDGVPIKPALALGGWIAFKPAHGGAMVMGDLVLLETEINPVMAKM 109 Query: 121 ISNGMQITAVHNHLLGASPATFYMHVAGHGDPVKIAAAIRDGLAESKTPLTAAAPAAPPP 180 I++G++ITAVHNHLL A+PATFYMHVAGHG+PV++A+AI D LAESKTPL AP P P Sbjct: 110 IASGLEITAVHNHLLRANPATFYMHVAGHGEPVRLASAIHDALAESKTPLVVPAPTGPSP 169 Query: 181 AIDLDTAQLDQIIGVKGQANGGVYQFNVPRRDPITEEGMALSPVGPLGVAIGINFQPTGG 240 A+DLDTA+LDQIIGVKGQANGGVYQ++V RRD IT++G L+PVG +GVAIGINFQPTG Sbjct: 170 AVDLDTAKLDQIIGVKGQANGGVYQYSVKRRDAITQDGTPLTPVGAMGVAIGINFQPTGA 229 Query: 241 GKAAITGDFVLTNDEVNPVIMALRTHGIDVTALHSHMLDEQPRLFFMHFWANDDAVKLAK 300 GKAAITGDFVLT DEVNPVI+ALR HGI+VTALHSHMLDEQPRLFFMHFWANDDAVKLA+ Sbjct: 230 GKAAITGDFVLTGDEVNPVILALRAHGIEVTALHSHMLDEQPRLFFMHFWANDDAVKLAE 289 Query: 301 GLRAALDKTATTKS 314 GLRAALDKTA+TKS Sbjct: 290 GLRAALDKTASTKS 303 >ref|ZP_01048611.1| LpqO protein-like [Nitrobacter sp. Nb-311A] gb|EAQ33418.1| LpqO protein-like [Nitrobacter sp. Nb-311A] Length = 285 Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust. Identities = 224/279 (80%), Positives = 247/279 (88%) Query: 36 SSAHAQAIDWQKVDDTLGRKPAVTGDVHRYGFPRSDLAVTLDGVTIKPALALGGWVAFKP 95 + A +DW KVD LGR PAVT DVHRYGFPR+DL VTLDGVTIKPALALGGW+AFK Sbjct: 7 TYAQDHGVDWGKVDGILGRNPAVTEDVHRYGFPRTDLTVTLDGVTIKPALALGGWIAFKQ 66 Query: 96 MHDGVMAMGDLVLLESEINPVMLKMISNGMQITAVHNHLLGASPATFYMHVAGHGDPVKI 155 H+G MAMGDLVLLESEINPVMLKMI+ G++ITA+HNHLL ASPATFYMHVAGHGDP K+ Sbjct: 67 AHEGAMAMGDLVLLESEINPVMLKMIAGGLEITAIHNHLLRASPATFYMHVAGHGDPAKL 126 Query: 156 AAAIRDGLAESKTPLTAAAPAAPPPAIDLDTAQLDQIIGVKGQANGGVYQFNVPRRDPIT 215 A A+ D LAESKTPL A + PPPA+DLDTAQLDQIIGVKG+ NGGVYQFNVPRRDP++ Sbjct: 127 ATALHDALAESKTPLQATPSSNPPPAVDLDTAQLDQIIGVKGKTNGGVYQFNVPRRDPVS 186 Query: 216 EEGMALSPVGPLGVAIGINFQPTGGGKAAITGDFVLTNDEVNPVIMALRTHGIDVTALHS 275 E GM L+P GP+GVAIGINFQPTGGGKAA TGDFVLT DEVNPV+ ALRTHGI+VTALHS Sbjct: 187 EGGMTLTPAGPMGVAIGINFQPTGGGKAATTGDFVLTGDEVNPVVAALRTHGIEVTALHS 246 Query: 276 HMLDEQPRLFFMHFWANDDAVKLAKGLRAALDKTATTKS 314 HMLDEQPRLFFMHFWANDDA+KLAKGLRAALDKTA+TK+ Sbjct: 247 HMLDEQPRLFFMHFWANDDAIKLAKGLRAALDKTASTKN 285