BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0106.0032.p (142 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_01046775.1| putative chromate transport protein [Nitrobac... 216 9e-55 ref|NP_771692.1| chromate transport protein [Bradyrhizobium japo... 206 1e-51 ref|YP_001206410.1| putative chromate transporter (ChrA-like) [B... 194 3e-48 gb|AAF22878.1| putative polytopic integral membrane protein [Bra... 194 4e-48 ref|YP_001240599.1| putative chromate transporter [Bradyrhizobiu... 194 5e-48 >ref|ZP_01046775.1| putative chromate transport protein [Nitrobacter sp. Nb-311A] gb|EAQ35328.1| putative chromate transport protein [Nitrobacter sp. Nb-311A] Length = 463 Score = 216 bits (550), Expect = 9e-55, Method: Compositional matrix adjust. Identities = 103/128 (80%), Positives = 111/128 (86%) Query: 1 MTDVATTAKARGHEPAHGISFNEALLVWMRVAILSFGGPAGQIAVMHRILVEEKNWISEG 60 MTDVA K HGIS NEALLVW+RVA+LSFGGPAGQIAVMHR+LV+EKNWISE Sbjct: 1 MTDVAANQKTGAEALGHGISLNEALLVWIRVAVLSFGGPAGQIAVMHRVLVQEKNWISES 60 Query: 61 RFLHALNYCMLLPGPEAQQLATYIGWLLHRTLGGIVAGGLFILPGIFAIMGLSYIYATYG 120 RFLHALNYCMLLPGPEAQQLA YIGWLLHRT+GG+VAGGLFI+PG+ AIMGLSYIYA YG Sbjct: 61 RFLHALNYCMLLPGPEAQQLAIYIGWLLHRTVGGLVAGGLFIVPGVVAIMGLSYIYAIYG 120 Query: 121 NVGFVEAL 128 NV FVEA Sbjct: 121 NVRFVEAF 128 >ref|NP_771692.1| chromate transport protein [Bradyrhizobium japonicum USDA 110] dbj|BAC50317.1| blr5052 [Bradyrhizobium japonicum USDA 110] Length = 461 Score = 206 bits (523), Expect = 1e-51, Method: Compositional matrix adjust. Identities = 98/117 (83%), Positives = 105/117 (89%) Query: 12 GHEPAHGISFNEALLVWMRVAILSFGGPAGQIAVMHRILVEEKNWISEGRFLHALNYCML 71 G + HGISFNEA VW+RVA LSFGGPAGQIAVMHRILVEEK WISEGRFLHALNYCML Sbjct: 9 GADAGHGISFNEAFRVWLRVACLSFGGPAGQIAVMHRILVEEKKWISEGRFLHALNYCML 68 Query: 72 LPGPEAQQLATYIGWLLHRTLGGIVAGGLFILPGIFAIMGLSYIYATYGNVGFVEAL 128 LPGPEAQQLATY+GWL+HRT GG++AGGLFILPGI AIM LSYIYA +GNV FVEAL Sbjct: 69 LPGPEAQQLATYVGWLMHRTAGGLMAGGLFILPGIIAIMALSYIYAAFGNVSFVEAL 125 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 14/121 (11%) Query: 21 FNEALLVWMRVAILSFGGPAGQIAVMHRILVEEKNWISEGRFLHALNYCMLLPGPEAQQL 80 F++ L + ++A+++FGG +A + + VE +W+ L L PGP L Sbjct: 255 FSQIALFFSKMALVTFGGAYAVLAYVAQQAVEHYHWLKPHEMLDGLGMAETTPGPLIMVL 314 Query: 81 ATYIGW------------LLHRTLGGIVAGGLFILPGIFAI-MGLSYIYATYGNVGFVEA 127 ++G+ +L TLGG++A + P I +G YI GN G A Sbjct: 315 -QFVGFMAAYRDPSGLSPMLAATLGGLLATWVTFTPCFLWIFVGAPYIERLRGNTGLAGA 373 Query: 128 L 128 L Sbjct: 374 L 374 >ref|YP_001206410.1| putative chromate transporter (ChrA-like) [Bradyrhizobium sp. ORS 278] emb|CAL78189.1| putative chromate transporter (ChrA-like) [Bradyrhizobium sp. ORS 278] Length = 463 Score = 194 bits (493), Expect = 3e-48, Method: Compositional matrix adjust. Identities = 91/128 (71%), Positives = 108/128 (84%) Query: 1 MTDVATTAKARGHEPAHGISFNEALLVWMRVAILSFGGPAGQIAVMHRILVEEKNWISEG 60 MT++ ++ + HG+SF EA VW+RVA+LSFGGPAGQIAVMHRI+V+EK W+SE Sbjct: 1 MTELVSSTAPTEADAGHGVSFAEAFKVWLRVALLSFGGPAGQIAVMHRIIVDEKRWVSES 60 Query: 61 RFLHALNYCMLLPGPEAQQLATYIGWLLHRTLGGIVAGGLFILPGIFAIMGLSYIYATYG 120 RFLHALNYCMLLPGPEAQQLATYIGWL+HRT GG++AGGLFILPGI AIM LS+IY +G Sbjct: 61 RFLHALNYCMLLPGPEAQQLATYIGWLMHRTAGGLMAGGLFILPGILAIMALSWIYVAFG 120 Query: 121 NVGFVEAL 128 +V FVEAL Sbjct: 121 HVWFVEAL 128 Score = 38.5 bits (88), Expect = 0.35, Method: Compositional matrix adjust. Identities = 39/141 (27%), Positives = 63/141 (44%), Gaps = 18/141 (12%) Query: 1 MTDVATTAKARGHEPAHGISFNEALLVWMRVAILSFGGPAGQIAVMHRILVEEKNWISEG 60 + VAT A G G +F++ L + ++A+++FGG +A + + VE +W++ Sbjct: 241 LVPVATIVAATGS----GSTFSQIALFFSKMAMVTFGGAYAVLAYVGQQAVEHYHWLTPP 296 Query: 61 RFLHALNYCMLLPGPEAQQLATYIGW------------LLHRTLGGIVAGGLFILPGIFA 108 L L PGP L ++G+ L+ TLGG++A + P Sbjct: 297 EMLDGLGMAETTPGPLIMVL-QFVGFVAAARDPGSLSPLIAGTLGGLLATWVTFAPCFLW 355 Query: 109 I-MGLSYIYATYGNVGFVEAL 128 I +G YI GN G AL Sbjct: 356 IFVGAPYIERLRGNKGLAGAL 376 >gb|AAF22878.1| putative polytopic integral membrane protein [Bradyrhizobium japonicum] Length = 461 Score = 194 bits (493), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 93/117 (79%), Positives = 100/117 (85%) Query: 12 GHEPAHGISFNEALLVWMRVAILSFGGPAGQIAVMHRILVEEKNWISEGRFLHALNYCML 71 G + HGIS NEA VW+RVA LSFGGPAGQIAVMHRILVEEK WISEGRFLHALNYCML Sbjct: 9 GADAGHGISVNEAFRVWLRVACLSFGGPAGQIAVMHRILVEEKKWISEGRFLHALNYCML 68 Query: 72 LPGPEAQQLATYIGWLLHRTLGGIVAGGLFILPGIFAIMGLSYIYATYGNVGFVEAL 128 LPGPE L TY+GWL+HRT GG++AGGLFILPGI AIM LSYIYA +GNV FVEAL Sbjct: 69 LPGPERSSLRTYVGWLMHRTAGGLMAGGLFILPGIIAIMALSYIYAAFGNVSFVEAL 125 >ref|YP_001240599.1| putative chromate transporter [Bradyrhizobium sp. BTAi1] gb|ABQ36693.1| putative chromate transporter [Bradyrhizobium sp. BTAi1] Length = 463 Score = 194 bits (492), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 90/128 (70%), Positives = 109/128 (85%) Query: 1 MTDVATTAKARGHEPAHGISFNEALLVWMRVAILSFGGPAGQIAVMHRILVEEKNWISEG 60 MT++ ++ + + HG+SF EA VW+RVA+LSFGGPAGQIA+MHRI+V+EK W+SE Sbjct: 1 MTELVSSTASTKVDAGHGVSFAEAFRVWLRVALLSFGGPAGQIAMMHRIIVDEKRWVSES 60 Query: 61 RFLHALNYCMLLPGPEAQQLATYIGWLLHRTLGGIVAGGLFILPGIFAIMGLSYIYATYG 120 RFLHALNYCMLLPGPEAQQLATYIGWL+HRT GG++AGGLFILPGI AIM LS+IY +G Sbjct: 61 RFLHALNYCMLLPGPEAQQLATYIGWLMHRTAGGLMAGGLFILPGIIAIMALSWIYVAFG 120 Query: 121 NVGFVEAL 128 +V FVEAL Sbjct: 121 HVWFVEAL 128 Score = 36.2 bits (82), Expect = 1.5, Method: Compositional matrix adjust. Identities = 33/122 (27%), Positives = 56/122 (45%), Gaps = 14/122 (11%) Query: 20 SFNEALLVWMRVAILSFGGPAGQIAVMHRILVEEKNWISEGRFLHALNYCMLLPGPEAQQ 79 +F++ L + ++A+++FGG +A + + VE +W++ L L PGP Sbjct: 256 TFSQIALFFSKMAMVTFGGAYAVLAYVGQQAVEHYHWLAPAEMLDGLGMAETTPGPLIMV 315 Query: 80 LATYIGW------------LLHRTLGGIVAGGLFILPGIFAI-MGLSYIYATYGNVGFVE 126 L ++G+ L+ TLGG++A + P I +G YI GN G Sbjct: 316 L-QFVGFIAAARDPGSLSPLIAGTLGGLLATWVTFTPCFLWIFVGAPYIERLRGNKGLAG 374 Query: 127 AL 128 AL Sbjct: 375 AL 376