BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0106.0031.p (272 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|ZP_01046776.1| superoxide dismutase SodM-like protein [Nitro... 485 e-135 ref|NP_771691.1| superoxide dismutase SodM-like protein [Bradyrh... 418 e-115 ref|YP_001206409.1| putative thiosulfate sulfurtransferase [Brad... 410 e-112 ref|YP_001240598.1| hypothetical protein BBta_4664 [Bradyrhizobi... 408 e-112 gb|AAF22879.1| superoxide dismutase SodM-like protein [Bradyrhiz... 399 e-109 >ref|ZP_01046776.1| superoxide dismutase SodM-like protein [Nitrobacter sp. Nb-311A] gb|EAQ35329.1| superoxide dismutase SodM-like protein [Nitrobacter sp. Nb-311A] Length = 286 Score = 485 bits (1249), Expect = e-135, Method: Compositional matrix adjust. Identities = 233/271 (85%), Positives = 251/271 (92%) Query: 2 SSYTSISSEKLSRLIGTAKAPTLVDVRLDEDFAADPRLIPGAVRYSHLDVQDWASRLTGQ 61 +SYTSISS+KLSRLIGTA APTL+DVRLDEDF+ DPRLIP AV+ SHLD+Q WA L GQ Sbjct: 16 ASYTSISSDKLSRLIGTAGAPTLIDVRLDEDFSGDPRLIPSAVKRSHLDLQQWAPSLNGQ 75 Query: 62 SVVVVCQKGQKLAEGTAAWLRCSNITAEILEGGHLGWREAELPTVPADKIPKRDGRGRTV 121 SVVV+ KGQKL+EGTAAWLRCSN+ AEILEGGHLG ++A+LPT+PADKIP+RDGRGRTV Sbjct: 76 SVVVIGNKGQKLSEGTAAWLRCSNVAAEILEGGHLGRKKAKLPTIPADKIPRRDGRGRTV 135 Query: 122 WVTRSRPKIDRIACPWLIRRFVDPAAVFLFVTSAEVEGVAERFDATPFDIENVFWSHRGE 181 WVTRSRPKIDRIACPWLIRRFVDP A FLFVT AEVE VAERFDATPFDIE+ FWSHRGE Sbjct: 136 WVTRSRPKIDRIACPWLIRRFVDPHAAFLFVTPAEVEAVAERFDATPFDIEDTFWSHRGE 195 Query: 182 LCTFDVMVKEFGLATPALERLATMVRAADTARLELSPEAPGLLAASLGLSRMFDDDLEQL 241 LCTFDVMVKEFGLATP LERLA MVRAADTAR +LSPEAPGLLAASLGLSRMFDDDLEQL Sbjct: 196 LCTFDVMVKEFGLATPPLERLAAMVRAADTARPDLSPEAPGLLAASLGLSRMFDDDLEQL 255 Query: 242 SAGLLLYDAFYRWCRDATKETHNWPTSKVKP 272 +AGLLLYDAFYRWCRDATKETHNWPT+KVKP Sbjct: 256 NAGLLLYDAFYRWCRDATKETHNWPTNKVKP 286 >ref|NP_771691.1| superoxide dismutase SodM-like protein [Bradyrhizobium japonicum USDA 110] dbj|BAC50316.1| superoxide dismutase SodM-like protein [Bradyrhizobium japonicum USDA 110] Length = 277 Score = 418 bits (1075), Expect = e-115, Method: Compositional matrix adjust. Identities = 197/271 (72%), Positives = 232/271 (85%) Query: 1 MSSYTSISSEKLSRLIGTAKAPTLVDVRLDEDFAADPRLIPGAVRYSHLDVQDWASRLTG 60 MS++T+ISS+KL+RLIGTA AP L+DVR +EDFAAD RLIPG++R SH +V DW + G Sbjct: 6 MSTFTTISSDKLARLIGTANAPVLIDVRTEEDFAADRRLIPGSIRLSHENVPDWGAAFAG 65 Query: 61 QSVVVVCQKGQKLAEGTAAWLRCSNITAEILEGGHLGWREAELPTVPADKIPKRDGRGRT 120 +SV+V C +G KLA+GTAAWLR + AE L+GG GW+EA+LP + K+P RD +GRT Sbjct: 66 RSVIVSCLRGAKLAQGTAAWLRQLGVQAETLDGGFEGWKEAKLPLLDTRKLPPRDAKGRT 125 Query: 121 VWVTRSRPKIDRIACPWLIRRFVDPAAVFLFVTSAEVEGVAERFDATPFDIENVFWSHRG 180 VWVTR+RPK+DRIACPWLIRRFVDP AVFL+V +EV V ERF+A PFDIENVFWSHRG Sbjct: 126 VWVTRARPKVDRIACPWLIRRFVDPNAVFLYVAPSEVVAVGERFNAAPFDIENVFWSHRG 185 Query: 181 ELCTFDVMVKEFGLATPALERLATMVRAADTARLELSPEAPGLLAASLGLSRMFDDDLEQ 240 ELCTFDVM++EFG+ATPAL RLAT+VR ADTAR +L+PEAPGLLAASLGLSRM+DDDLEQ Sbjct: 186 ELCTFDVMIEEFGIATPALLRLATLVRGADTARPDLAPEAPGLLAASLGLSRMYDDDLEQ 245 Query: 241 LSAGLLLYDAFYRWCRDATKETHNWPTSKVK 271 L AGLLLYDAFYRWCRDAT ETHNWPT+KVK Sbjct: 246 LEAGLLLYDAFYRWCRDATAETHNWPTNKVK 276 >ref|YP_001206409.1| putative thiosulfate sulfurtransferase [Bradyrhizobium sp. ORS 278] emb|CAL78188.1| conserved hypothetical protein; putative thiosulfate sulfurtransferase (ChrB/GlpE-like) [Bradyrhizobium sp. ORS 278] Length = 272 Score = 410 bits (1053), Expect = e-112, Method: Compositional matrix adjust. Identities = 195/272 (71%), Positives = 223/272 (81%) Query: 1 MSSYTSISSEKLSRLIGTAKAPTLVDVRLDEDFAADPRLIPGAVRYSHLDVQDWASRLTG 60 MSS+ SIS +KL RLIGT +AP L+DVR EDFAADPRL+PGA++ L+ W++ G Sbjct: 1 MSSFASISPDKLIRLIGTPQAPLLIDVRTVEDFAADPRLVPGAIQRPALEAPQWSTEFAG 60 Query: 61 QSVVVVCQKGQKLAEGTAAWLRCSNITAEILEGGHLGWREAELPTVPADKIPKRDGRGRT 120 +SVVV+CQ+G KL+ G AAWLR + TAE LEGG W A P VPAD++P RD GRT Sbjct: 61 RSVVVICQRGAKLSHGAAAWLRVAKATAENLEGGFEAWNAAGFPLVPADRLPPRDADGRT 120 Query: 121 VWVTRSRPKIDRIACPWLIRRFVDPAAVFLFVTSAEVEGVAERFDATPFDIENVFWSHRG 180 VWVTR+RPKIDRIACPWLIRRFVDP AVFL+V +EV VAERF A PFD+EN FWSHRG Sbjct: 121 VWVTRARPKIDRIACPWLIRRFVDPQAVFLYVAPSEVMAVAERFQAAPFDVENTFWSHRG 180 Query: 181 ELCTFDVMVKEFGLATPALERLATMVRAADTARLELSPEAPGLLAASLGLSRMFDDDLEQ 240 ELCTFDVMV+EFGL TPAL+RLA +VRAADTARL+LS EAPGLLAASLGLSRM+DDDL Q Sbjct: 181 ELCTFDVMVEEFGLTTPALQRLAVIVRAADTARLDLSQEAPGLLAASLGLSRMYDDDLSQ 240 Query: 241 LSAGLLLYDAFYRWCRDATKETHNWPTSKVKP 272 L AGL LYDAFYRWCRDAT E+HNWPT+KVKP Sbjct: 241 LDAGLGLYDAFYRWCRDATSESHNWPTNKVKP 272 >ref|YP_001240598.1| hypothetical protein BBta_4664 [Bradyrhizobium sp. BTAi1] gb|ABQ36692.1| hypothetical protein BBta_4664 [Bradyrhizobium sp. BTAi1] Length = 272 Score = 408 bits (1048), Expect = e-112, Method: Compositional matrix adjust. Identities = 193/272 (70%), Positives = 224/272 (82%) Query: 1 MSSYTSISSEKLSRLIGTAKAPTLVDVRLDEDFAADPRLIPGAVRYSHLDVQDWASRLTG 60 MSS+ SIS +KLSRLIGT +AP L+DVR DEDFAADPRLIPGA+R ++ W++ G Sbjct: 1 MSSFASISPDKLSRLIGTPQAPILIDVRTDEDFAADPRLIPGAIRRPAVEAPQWSAAFAG 60 Query: 61 QSVVVVCQKGQKLAEGTAAWLRCSNITAEILEGGHLGWREAELPTVPADKIPKRDGRGRT 120 +SV+V+CQ+G KL+ G AAWLR + +AE L+GG W+ A LP VP K+P RDG GRT Sbjct: 61 RSVIVICQRGAKLSHGAAAWLRVAKASAENLDGGFEAWKAAGLPLVPVAKLPPRDGEGRT 120 Query: 121 VWVTRSRPKIDRIACPWLIRRFVDPAAVFLFVTSAEVEGVAERFDATPFDIENVFWSHRG 180 VWVTR+RPKIDRIACPWLIRRFVDP AVFLFV +EV V ERF A PFD+E+ FWSHRG Sbjct: 121 VWVTRARPKIDRIACPWLIRRFVDPQAVFLFVAPSEVMAVGERFKAAPFDVESTFWSHRG 180 Query: 181 ELCTFDVMVKEFGLATPALERLATMVRAADTARLELSPEAPGLLAASLGLSRMFDDDLEQ 240 E CTFDVM++EFGL TPAL+RLA +VRAADTARL+LS EAPGLLAASLGLSR++DDDL Q Sbjct: 181 EFCTFDVMIEEFGLTTPALQRLARIVRAADTARLDLSAEAPGLLAASLGLSRIYDDDLAQ 240 Query: 241 LSAGLLLYDAFYRWCRDATKETHNWPTSKVKP 272 L AGL LYDAFYRWCRDAT E+HNWPTSKVKP Sbjct: 241 LDAGLGLYDAFYRWCRDATGESHNWPTSKVKP 272 >gb|AAF22879.1| superoxide dismutase SodM-like protein [Bradyrhizobium japonicum] Length = 276 Score = 399 bits (1025), Expect = e-109, Method: Compositional matrix adjust. Identities = 194/273 (71%), Positives = 229/273 (83%), Gaps = 5/273 (1%) Query: 1 MSSYTSISSEKLSRLIGTAKAPTLVDVRLDEDFAADPRLIPGAVRYSHLDVQDWASRLTG 60 MS++T+ISS+KL+RLIGTA AP L+DVR +EDFAAD RLIPG++R SH +V DW + G Sbjct: 6 MSTFTTISSDKLARLIGTANAPVLIDVRTEEDFAADRRLIPGSIRLSHENVPDWGAAFAG 65 Query: 61 QSVVVVCQKGQKLAEGTAAWLRCSNITA--EILEGGHLGWREAELPTVPADKIPKRDGRG 118 +SV+V C +G KLA+GTAA CS A L+GG GW+EA+LP + K+P RD +G Sbjct: 66 RSVIVSCLRGAKLAQGTAA---CSASLAFRPRLDGGFEGWKEAKLPLLDTRKLPPRDAKG 122 Query: 119 RTVWVTRSRPKIDRIACPWLIRRFVDPAAVFLFVTSAEVEGVAERFDATPFDIENVFWSH 178 RTVWVTR+RPK+DRIACPWLIRRFVDP AVFL+V +EV V ERF+A PFDIENVFWSH Sbjct: 123 RTVWVTRARPKVDRIACPWLIRRFVDPNAVFLYVAPSEVVAVGERFNAAPFDIENVFWSH 182 Query: 179 RGELCTFDVMVKEFGLATPALERLATMVRAADTARLELSPEAPGLLAASLGLSRMFDDDL 238 RGELCTFDVM++EFG+ATPAL RLAT+VR ADTAR +L+PEAPGLLAASLGLSRM+DDDL Sbjct: 183 RGELCTFDVMIEEFGIATPALLRLATLVRGADTARPDLAPEAPGLLAASLGLSRMYDDDL 242 Query: 239 EQLSAGLLLYDAFYRWCRDATKETHNWPTSKVK 271 EQL AGLLLYDAFYRWCRDAT ETH+WPT+KVK Sbjct: 243 EQLEAGLLLYDAFYRWCRDATAETHDWPTNKVK 275