BLASTP 2.2.21 [Jun-14-2009]

Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 0106.0027.p         (184 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects 
           15,459,386 sequences; 5,307,515,862 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_769721.1| hypothetical protein bll3081 [Bradyrhizobium ja...   211   5e-53
ref|NP_774709.1| hypothetical protein blr8069 [Bradyrhizobium ja...   185   2e-45
ref|YP_766786.1| hypothetical protein RL1180 [Rhizobium legumino...   162   2e-38
ref|YP_001772861.1| hypothetical protein M446_6157 [Methylobacte...   135   3e-30
ref|YP_002490154.1| hypothetical protein Mnod_7988 [Methylobacte...   132   2e-29

>ref|NP_769721.1| hypothetical protein bll3081 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC48346.1| bll3081 [Bradyrhizobium japonicum USDA 110]
          Length = 402

 Score =  211 bits (536), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 116/148 (78%), Positives = 124/148 (83%), Gaps = 8/148 (5%)

Query: 1   MDTEPHTLLRSENRRCKIAILSRGDATSRREATAQNSRFVRVFEALAATGIEAVPVVYDE 60
           MDTE H  LRS      +AILSRGDA +R +AT QNSRFVRVFEALAA GIEA PV+YDE
Sbjct: 44  MDTEQHFPLRS-----TVAILSRGDAAARADATPQNSRFVRVFEALAAAGIEARPVIYDE 98

Query: 61  TFVDTVRDQLLTMDGVLVWVDPIHQGKTRAALDPLLRDVAAKGPWVSAHPDVILKMGVKD 120
           TF D VRDQLL +DGVLVWVDPIHQGKTRA LDPLLRDVAA+GPWVSAHPDVILKMGVK+
Sbjct: 99  TFADAVRDQLLAVDGVLVWVDPIHQGKTRADLDPLLRDVAARGPWVSAHPDVILKMGVKE 158

Query: 121 VLYRTRHLGWGADTHRY---ATARPGFP 145
           VLYRTRHLGWGADTHRY   A+ R  FP
Sbjct: 159 VLYRTRHLGWGADTHRYDTTASFRAEFP 186


>ref|NP_774709.1| hypothetical protein blr8069 [Bradyrhizobium japonicum USDA 110]
 dbj|BAC53334.1| blr8069 [Bradyrhizobium japonicum USDA 110]
          Length = 344

 Score =  185 bits (470), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 91/139 (65%), Positives = 109/139 (78%), Gaps = 5/139 (3%)

Query: 1   MDTEPHTLLRSENRRCKIAILSRGDATSRREATAQNSRFVRVFEALAATGIEAVPVVYDE 60
           MDTE     R  + R  +AILSRGDA +RR+AT++NSRFV VFEALAA G+E  P +YDE
Sbjct: 1   MDTE-----RQPSPRRTVAILSRGDAVARRDATSKNSRFVDVFEALAAVGVEGRPAIYDE 55

Query: 61  TFVDTVRDQLLTMDGVLVWVDPIHQGKTRAALDPLLRDVAAKGPWVSAHPDVILKMGVKD 120
           +F D VR+QLL +DGVLVWV+P+  G+ RA LD LLRDVAA+G WVSAHPDVILKMG K+
Sbjct: 56  SFADAVREQLLAVDGVLVWVNPVQDGRNRAGLDALLRDVAAQGVWVSAHPDVILKMGTKE 115

Query: 121 VLYRTRHLGWGADTHRYAT 139
           VLYRTR +GWG+DT  Y T
Sbjct: 116 VLYRTRSMGWGSDTALYQT 134


>ref|YP_766786.1| hypothetical protein RL1180 [Rhizobium leguminosarum bv. viciae
           3841]
 emb|CAK06677.1| conserved hypothetical protein [Rhizobium leguminosarum bv. viciae
           3841]
          Length = 351

 Score =  162 bits (410), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 80/129 (62%), Positives = 95/129 (73%)

Query: 12  ENRRCKIAILSRGDATSRREATAQNSRFVRVFEALAATGIEAVPVVYDETFVDTVRDQLL 71
           +N   +IAI+ RGD  +RR AT QN+RF R+FE LAA G+   P V+DE F D V +QLL
Sbjct: 2   KNSPPRIAIVWRGDRQARRAATPQNNRFHRIFEELAAVGLAPEPAVFDEEFADEVLEQLL 61

Query: 72  TMDGVLVWVDPIHQGKTRAALDPLLRDVAAKGPWVSAHPDVILKMGVKDVLYRTRHLGWG 131
            +D VLVWV+P+  GKTR  LDPLLR VA  G +VSAHPDVILKMGVK+VLY TRH+GWG
Sbjct: 62  AVDAVLVWVNPLDDGKTRKILDPLLRQVAEAGRFVSAHPDVILKMGVKEVLYETRHIGWG 121

Query: 132 ADTHRYATA 140
            DT  Y TA
Sbjct: 122 VDTRLYRTA 130


>ref|YP_001772861.1| hypothetical protein M446_6157 [Methylobacterium sp. 4-46]
 gb|ACA20427.1| conserved hypothetical protein [Methylobacterium sp. 4-46]
          Length = 352

 Score =  135 bits (340), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 74/138 (53%), Positives = 90/138 (65%), Gaps = 5/138 (3%)

Query: 13  NRRCKIAILSRGDATSRREATAQNSRFVRVFEALAATGIEAVPVVYDETFVDTVRDQLLT 72
            RR K+A++S GDA +R EA     R   +F ALA  GI A P V+ +   D VR QL+ 
Sbjct: 6   QRRFKVAVVSHGDAQARAEARPDTGRLSAIFAALAQQGIAAEPAVWSDALSDEVRAQLMG 65

Query: 73  MDGVLVWVDPIH--QGKTRAALDPLLRDVAAKGPWVSAHPDVILKMGVKDVLYRTRHLGW 130
           +DGVLVWV+PI    G  R  LD LLR+VAA G +VSAHPDVI KMG K+VL+RTR LGW
Sbjct: 66  VDGVLVWVNPITTPDGDGRGRLDDLLREVAAAGIFVSAHPDVIAKMGTKEVLFRTRELGW 125

Query: 131 GADTHRY---ATARPGFP 145
           G DT+ Y   A+ R  FP
Sbjct: 126 GTDTYVYPEPASFRAAFP 143


>ref|YP_002490154.1| hypothetical protein Mnod_7988 [Methylobacterium nodulans ORS 2060]
 gb|ACL62987.1| conserved hypothetical protein [Methylobacterium nodulans ORS 2060]
          Length = 356

 Score =  132 bits (333), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 72/140 (51%), Positives = 89/140 (63%), Gaps = 10/140 (7%)

Query: 2   DTEPHTLLRSENRRCKIAILSRGDATSRREATAQNSRFVRVFEALAATGIEAVPVVYDET 61
           DT PH          K+AI+  GDA  R  A  + SR   +F AL   GI A P V+ + 
Sbjct: 3   DTNPHPF--------KMAIVWWGDAEERAAARPETSRLKAIFAALERHGITAEPAVWSDA 54

Query: 62  FVDTVRDQLLTMDGVLVWVDPIHQ--GKTRAALDPLLRDVAAKGPWVSAHPDVILKMGVK 119
             D VR QL+++DGVLVWV+PI    G+ R  LD LLR+VAA G +VS+HPD+I +MGVK
Sbjct: 55  LTDKVRAQLMSVDGVLVWVNPITTPGGEGRGVLDDLLREVAAAGIFVSSHPDIIARMGVK 114

Query: 120 DVLYRTRHLGWGADTHRYAT 139
           +VLYRTR LGWG DTH Y T
Sbjct: 115 EVLYRTRKLGWGTDTHVYGT 134