BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0106.0026.p (422 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_567961.1| threonine synthase [Rhodopseudomonas palustris ... 687 0.0 ref|YP_575622.1| threonine synthase [Nitrobacter hamburgensis X1... 684 0.0 ref|YP_001208512.1| threonine synthase [Bradyrhizobium sp. ORS 2... 682 0.0 ref|YP_001237007.1| threonine synthase [Bradyrhizobium sp. BTAi1... 682 0.0 ref|YP_488172.1| threonine synthase [Rhodopseudomonas palustris ... 679 0.0 >ref|YP_567961.1| threonine synthase [Rhodopseudomonas palustris BisB5] gb|ABE38060.1| L-threonine synthase [Rhodopseudomonas palustris BisB5] Length = 472 Score = 687 bits (1774), Expect = 0.0, Method: Compositional matrix adjust. Identities = 336/407 (82%), Positives = 360/407 (88%), Gaps = 6/407 (1%) Query: 2 LGFCDVMLTGLARDGGLYVPETWPQLSPETIATFFGRPYWEVAVEIIRPFVAGEISDAEL 61 LGFCDVMLTGLARDGGLY+PE WPQLSPETIA FGRPYWEVAVE+IRPFVAGEISDAEL Sbjct: 14 LGFCDVMLTGLARDGGLYLPEVWPQLSPETIAGLFGRPYWEVAVEVIRPFVAGEISDAEL 73 Query: 62 GRMANEAYATFRHPAVVPLDQAGPNQFLLELFHGPTLAFKDVAMQLISRLMDHVLAKRAQ 121 GRMANEAYATFRHPAVVPL Q GP+QF+LELFHGPTLAFKDVAMQL+SRLMDHVL KR Q Sbjct: 74 GRMANEAYATFRHPAVVPLRQTGPSQFVLELFHGPTLAFKDVAMQLLSRLMDHVLEKRKQ 133 Query: 122 RTTIVVATSGDTGGAAVEAFANLDNVDLVVLFPNGRISEVQRRMMTTTGAANVHALAIEG 181 RTTIVVATSGDTGGAAV+AFANL+NVDLVVLFP+GRIS+VQR MMTT+ A NVHALAIEG Sbjct: 134 RTTIVVATSGDTGGAAVDAFANLNNVDLVVLFPHGRISDVQRMMMTTSAAPNVHALAIEG 193 Query: 182 TFDDCQALVKAMFNNHRFRDTVALSGVNSINWARIVAQVVYYFTSAVALGSPQRTVDFTV 241 FDDCQA+VK +FN+H FRD VALSGVNSINWARIVAQVVYYFTSAVALG+P R VDFTV Sbjct: 194 HFDDCQAIVKGLFNHHAFRDKVALSGVNSINWARIVAQVVYYFTSAVALGAPNRQVDFTV 253 Query: 242 PTGNFGDIFAGYVAKRMGLPIRNLRIAANVNDILARTLKTGIYEVREVHATTSPSMDIQV 301 PTGNFGDIFAGYVAK+MGLP+R L+IAANVNDILARTLKTGIYEVREVHATTSPSMDIQV Sbjct: 254 PTGNFGDIFAGYVAKKMGLPVRRLKIAANVNDILARTLKTGIYEVREVHATTSPSMDIQV 313 Query: 302 SSNFERLLFEASGRDADQVRRLMASLKQSGRFVLPDATLAAVRRDFDAGRADETETAAAI 361 SSNFERLLFEA+GRDA QVR LM SL QSGRFVLPDA LAA+R +FDAGRADETET AAI Sbjct: 314 SSNFERLLFEATGRDAAQVRALMGSLAQSGRFVLPDAVLAAIREEFDAGRADETETEAAI 373 Query: 362 RAAWREAGDLVDPHTXRS------PTATPPIPGFPTSCCRPRTRPNS 402 RAAWREAGDLVDPHT + T P +P S P++ Sbjct: 374 RAAWREAGDLVDPHTAVALAVADRDTTDPTVPNIVLSTAHAAKFPDA 420 >ref|YP_575622.1| threonine synthase [Nitrobacter hamburgensis X14] gb|ABE61162.1| L-threonine synthase [Nitrobacter hamburgensis X14] Length = 472 Score = 684 bits (1766), Expect = 0.0, Method: Compositional matrix adjust. Identities = 329/375 (87%), Positives = 353/375 (94%) Query: 2 LGFCDVMLTGLARDGGLYVPETWPQLSPETIATFFGRPYWEVAVEIIRPFVAGEISDAEL 61 L FCDVML GLARDGGLYVPE WPQL+P+TIA FFGRPYWEVAVE+IRPFVAG+ISDA+L Sbjct: 14 LRFCDVMLAGLARDGGLYVPEVWPQLTPDTIAGFFGRPYWEVAVEVIRPFVAGDISDADL 73 Query: 62 GRMANEAYATFRHPAVVPLDQAGPNQFLLELFHGPTLAFKDVAMQLISRLMDHVLAKRAQ 121 GRMANEAYATFRHPAVVPLDQ GPNQF+LELFHGPTLAFKDVAMQL+SRLMDHVLA+R + Sbjct: 74 GRMANEAYATFRHPAVVPLDQIGPNQFMLELFHGPTLAFKDVAMQLLSRLMDHVLAQRGR 133 Query: 122 RTTIVVATSGDTGGAAVEAFANLDNVDLVVLFPNGRISEVQRRMMTTTGAANVHALAIEG 181 RTTIVVATSGDTGGAAV+AFAN NVDL+VLFP+GRISEVQRRMMTTTGA+NVHALA++G Sbjct: 134 RTTIVVATSGDTGGAAVDAFANRANVDLIVLFPDGRISEVQRRMMTTTGASNVHALAVKG 193 Query: 182 TFDDCQALVKAMFNNHRFRDTVALSGVNSINWARIVAQVVYYFTSAVALGSPQRTVDFTV 241 TFDDCQA+VK +FNNHRFRD V+LSGVNSINWARIVAQVVYYFTSAVALG+P RTVDFTV Sbjct: 194 TFDDCQAIVKGLFNNHRFRDEVSLSGVNSINWARIVAQVVYYFTSAVALGAPARTVDFTV 253 Query: 242 PTGNFGDIFAGYVAKRMGLPIRNLRIAANVNDILARTLKTGIYEVREVHATTSPSMDIQV 301 PTGNFGDIFAGYVAK+MGLP+R LRIAANVNDIL RTLKTGIYEVREV AT SPSMDIQV Sbjct: 254 PTGNFGDIFAGYVAKKMGLPVRCLRIAANVNDILVRTLKTGIYEVREVRATASPSMDIQV 313 Query: 302 SSNFERLLFEASGRDADQVRRLMASLKQSGRFVLPDATLAAVRRDFDAGRADETETAAAI 361 SSNFERLLFEA+GRDA QVR LMASL QSGRFVLPD LA +RRDFD GR+DETETAAAI Sbjct: 314 SSNFERLLFEATGRDAAQVRALMASLAQSGRFVLPDPVLAEIRRDFDVGRSDETETAAAI 373 Query: 362 RAAWREAGDLVDPHT 376 RAAWREAGDLVDPHT Sbjct: 374 RAAWREAGDLVDPHT 388 >ref|YP_001208512.1| threonine synthase [Bradyrhizobium sp. ORS 278] emb|CAL80297.1| threonine synthase [Bradyrhizobium sp. ORS 278] Length = 471 Score = 682 bits (1761), Expect = 0.0, Method: Compositional matrix adjust. Identities = 328/375 (87%), Positives = 350/375 (93%) Query: 2 LGFCDVMLTGLARDGGLYVPETWPQLSPETIATFFGRPYWEVAVEIIRPFVAGEISDAEL 61 L FCDVMLTGLARDGGLYVPETWPQL+P TIA+FFGRPYWEVAVE+I+PFVAGEISDAEL Sbjct: 14 LTFCDVMLTGLARDGGLYVPETWPQLTPATIASFFGRPYWEVAVEVIKPFVAGEISDAEL 73 Query: 62 GRMANEAYATFRHPAVVPLDQAGPNQFLLELFHGPTLAFKDVAMQLISRLMDHVLAKRAQ 121 GRMANEAYATFRHPAVVPLDQ P+QF+LELFHGPTLAFKDVAMQLISRLMDHVLAKR + Sbjct: 74 GRMANEAYATFRHPAVVPLDQTAPHQFVLELFHGPTLAFKDVAMQLISRLMDHVLAKRGE 133 Query: 122 RTTIVVATSGDTGGAAVEAFANLDNVDLVVLFPNGRISEVQRRMMTTTGAANVHALAIEG 181 RTTIVVATSGDTGGAAV+AFA DN DL+VL+P+GRISEVQRRMMTT+GAANVHALAIEG Sbjct: 134 RTTIVVATSGDTGGAAVDAFAGRDNADLIVLYPHGRISEVQRRMMTTSGAANVHALAIEG 193 Query: 182 TFDDCQALVKAMFNNHRFRDTVALSGVNSINWARIVAQVVYYFTSAVALGSPQRTVDFTV 241 FDDCQA+VK +FN+H FRD V+LSGVNSINWARIVAQVVYYFTSAVA+G+P R VDFTV Sbjct: 194 HFDDCQAIVKGLFNHHAFRDAVSLSGVNSINWARIVAQVVYYFTSAVAVGAPHRAVDFTV 253 Query: 242 PTGNFGDIFAGYVAKRMGLPIRNLRIAANVNDILARTLKTGIYEVREVHATTSPSMDIQV 301 PTGNFGDIFAGYVAKRMGLP+R LR+A NVNDILARTL TGIYEVREVHAT SPSMDIQV Sbjct: 254 PTGNFGDIFAGYVAKRMGLPVRKLRVATNVNDILARTLATGIYEVREVHATASPSMDIQV 313 Query: 302 SSNFERLLFEASGRDADQVRRLMASLKQSGRFVLPDATLAAVRRDFDAGRADETETAAAI 361 SSNFERLLFEA GRDA VRRLM SLKQSGRFVLPDA LAA+ DFDAGRADETETAAAI Sbjct: 314 SSNFERLLFEAGGRDAGTVRRLMESLKQSGRFVLPDAMLAAISADFDAGRADETETAAAI 373 Query: 362 RAAWREAGDLVDPHT 376 RAA+REAGDLVDPHT Sbjct: 374 RAAFREAGDLVDPHT 388 >ref|YP_001237007.1| threonine synthase [Bradyrhizobium sp. BTAi1] gb|ABQ33101.1| L-threonine synthase [Bradyrhizobium sp. BTAi1] Length = 471 Score = 682 bits (1760), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/375 (88%), Positives = 350/375 (93%) Query: 2 LGFCDVMLTGLARDGGLYVPETWPQLSPETIATFFGRPYWEVAVEIIRPFVAGEISDAEL 61 L FCDVMLTGLARDGGLYVPETWPQLS ETIA FFGRPYWEVAVE+I+PFVAGEISDAEL Sbjct: 14 LTFCDVMLTGLARDGGLYVPETWPQLSAETIAGFFGRPYWEVAVEVIKPFVAGEISDAEL 73 Query: 62 GRMANEAYATFRHPAVVPLDQAGPNQFLLELFHGPTLAFKDVAMQLISRLMDHVLAKRAQ 121 GRMANEAYATFRHPAVVPLDQ P+QF+LELFHGPTLAFKDVAMQLISRLMDHVLAKR + Sbjct: 74 GRMANEAYATFRHPAVVPLDQIAPHQFVLELFHGPTLAFKDVAMQLISRLMDHVLAKRGE 133 Query: 122 RTTIVVATSGDTGGAAVEAFANLDNVDLVVLFPNGRISEVQRRMMTTTGAANVHALAIEG 181 RTTIVVATSGDTGGAAV+AFA DN DL+VLFP+GRISEVQRRMMTT+GAANVHALAIEG Sbjct: 134 RTTIVVATSGDTGGAAVDAFAGRDNADLIVLFPHGRISEVQRRMMTTSGAANVHALAIEG 193 Query: 182 TFDDCQALVKAMFNNHRFRDTVALSGVNSINWARIVAQVVYYFTSAVALGSPQRTVDFTV 241 FDDCQA+VK +FN+H FRD+VALSGVNSINWAR+VAQVVYYFTSAVA+G+P R VDFTV Sbjct: 194 HFDDCQAIVKGLFNHHGFRDSVALSGVNSINWARVVAQVVYYFTSAVAVGAPHRAVDFTV 253 Query: 242 PTGNFGDIFAGYVAKRMGLPIRNLRIAANVNDILARTLKTGIYEVREVHATTSPSMDIQV 301 PTGNFGDIFAGYVAKRMGLP+R LR+A NVNDILARTL TGIYEVREVHAT SPSMDIQV Sbjct: 254 PTGNFGDIFAGYVAKRMGLPVRTLRVATNVNDILARTLATGIYEVREVHATASPSMDIQV 313 Query: 302 SSNFERLLFEASGRDADQVRRLMASLKQSGRFVLPDATLAAVRRDFDAGRADETETAAAI 361 SSNFERLLFEA GRDA VRRLM LKQSGRFVLPDA LAAVR DF+AGRADETETAAAI Sbjct: 314 SSNFERLLFEAGGRDAGTVRRLMEGLKQSGRFVLPDAMLAAVRADFEAGRADETETAAAI 373 Query: 362 RAAWREAGDLVDPHT 376 RAA+REAGDLVDPHT Sbjct: 374 RAAFREAGDLVDPHT 388 >ref|YP_488172.1| threonine synthase [Rhodopseudomonas palustris HaA2] gb|ABD09261.1| L-threonine synthase [Rhodopseudomonas palustris HaA2] Length = 472 Score = 679 bits (1752), Expect = 0.0, Method: Compositional matrix adjust. Identities = 330/407 (81%), Positives = 358/407 (87%), Gaps = 6/407 (1%) Query: 2 LGFCDVMLTGLARDGGLYVPETWPQLSPETIATFFGRPYWEVAVEIIRPFVAGEISDAEL 61 LGFCDVMLTGLARDGGLY+P+ WPQLSP+ IA FGRPYWEVAVE+IRPFVAGEISDAEL Sbjct: 14 LGFCDVMLTGLARDGGLYIPDVWPQLSPDAIAALFGRPYWEVAVEVIRPFVAGEISDAEL 73 Query: 62 GRMANEAYATFRHPAVVPLDQAGPNQFLLELFHGPTLAFKDVAMQLISRLMDHVLAKRAQ 121 GRMANEAYATFRHPAVVPL Q+G +QF+LELFHGPTLAFKDVAMQL+SRLMDHVL KR Q Sbjct: 74 GRMANEAYATFRHPAVVPLRQSGSSQFVLELFHGPTLAFKDVAMQLLSRLMDHVLEKRRQ 133 Query: 122 RTTIVVATSGDTGGAAVEAFANLDNVDLVVLFPNGRISEVQRRMMTTTGAANVHALAIEG 181 RTTIVVATSGDTGGAAV+AFANL+NVDLVVLFP+GRIS+VQR MMTT+GA NVHALAIEG Sbjct: 134 RTTIVVATSGDTGGAAVDAFANLNNVDLVVLFPHGRISDVQRMMMTTSGAPNVHALAIEG 193 Query: 182 TFDDCQALVKAMFNNHRFRDTVALSGVNSINWARIVAQVVYYFTSAVALGSPQRTVDFTV 241 FDDCQA+VK +FN+H FRD VALSGVNSINWARIVAQVVYYFTSAVALG+P R VDFTV Sbjct: 194 HFDDCQAIVKGLFNHHAFRDKVALSGVNSINWARIVAQVVYYFTSAVALGAPNRVVDFTV 253 Query: 242 PTGNFGDIFAGYVAKRMGLPIRNLRIAANVNDILARTLKTGIYEVREVHATTSPSMDIQV 301 PTGNFGDIFAGYVAK+MGLP+R L+IAAN NDILARTLKTGIYEVREVH+TTSPSMDIQV Sbjct: 254 PTGNFGDIFAGYVAKKMGLPVRRLKIAANTNDILARTLKTGIYEVREVHSTTSPSMDIQV 313 Query: 302 SSNFERLLFEASGRDADQVRRLMASLKQSGRFVLPDATLAAVRRDFDAGRADETETAAAI 361 SSNFERLLFEA+GRDA QVR LM SL QSGRFVLPDA LAA+R +FDAGRADETET AAI Sbjct: 314 SSNFERLLFEATGRDAAQVRALMGSLHQSGRFVLPDAVLAAIREEFDAGRADETETEAAI 373 Query: 362 RAAWREAGDLVDPHTXRS------PTATPPIPGFPTSCCRPRTRPNS 402 R AWREAGDLVDPHT + T P +P S P++ Sbjct: 374 RTAWREAGDLVDPHTAVALAVADRDTTDPTVPNIVLSTAHAAKFPDA 420