BLASTP 2.2.21 [Jun-14-2009] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Altschul, Stephen F., John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. Query= 0106.0001.p (189 letters) Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 15,459,386 sequences; 5,307,515,862 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|YP_001208488.1| putative outer-membrane immunogenic protein ... 257 5e-67 ref|YP_001237033.1| putative outer-membrane immunogenic protein ... 247 6e-64 ref|NP_767844.1| outer-membrane immunogenic protein [Bradyrhizob... 234 3e-60 ref|YP_576943.1| OmpA-like transmembrane region [Nitrobacter ham... 194 4e-48 ref|YP_485815.1| putative outer membrane protein [Rhodopseudomon... 194 5e-48 >ref|YP_001208488.1| putative outer-membrane immunogenic protein [Bradyrhizobium sp. ORS 278] emb|CAL80273.1| conserved hypothetical protein; putative outer-membrane immunogenic protein precursor; putative secreted protein [Bradyrhizobium sp. ORS 278] Length = 242 Score = 257 bits (657), Expect = 5e-67, Method: Compositional matrix adjust. Identities = 127/180 (70%), Positives = 146/180 (81%), Gaps = 2/180 (1%) Query: 1 VFSQNNSFNGLSL-SDSDARFMGGVQGGYDWQLSPMWVIGVEGQYSWVGGHQLNAIFPGG 59 FS +N+F+GL ++S+ RF+GGVQ G DWQ +P WVIG EGQYSW+ G + A FPGG Sbjct: 57 AFSSDNNFSGLGTGNNSNGRFLGGVQAGADWQFAPTWVIGAEGQYSWLSG-SVGAAFPGG 115 Query: 60 YVYNNNQRGIGSITGRVGYTWGPGLIYVKGGYAYSDNNETVTLGGAPVGFALSDNHSNGW 119 YVYNN+QRG+GSITGRVGYTWGPGL+YVKGGYAYSDNNE VTL G VGFA S +H NGW Sbjct: 116 YVYNNSQRGLGSITGRVGYTWGPGLLYVKGGYAYSDNNEKVTLAGNQVGFATSGDHRNGW 175 Query: 120 TIGGGAEYMFAPNWSAKVEYQYYDFGDSRFTAPGALVPVGSFHNDEHTVKAGLNYRFNLG 179 T+GGG EYMFAPNWSAK EYQYY+FG + F AP ALVP GSF D+HT KAG+NYRFN G Sbjct: 176 TVGGGIEYMFAPNWSAKAEYQYYNFGSATFAAPAALVPTGSFTTDDHTFKAGVNYRFNWG 235 >ref|YP_001237033.1| putative outer-membrane immunogenic protein [Bradyrhizobium sp. BTAi1] gb|ABQ33127.1| putative outer-membrane immunogenic protein precursor [Bradyrhizobium sp. BTAi1] Length = 243 Score = 247 bits (631), Expect = 6e-64, Method: Compositional matrix adjust. Identities = 123/190 (64%), Positives = 148/190 (77%), Gaps = 5/190 (2%) Query: 1 VFSQNNSFNGLSL-SDSDARFMGGVQGGYDWQLSPMWVIGVEGQYSWVGGHQLNAIFPGG 59 FS +N+F+GL+ ++S+ RF+GGVQ G DWQ +P WVIG EGQYSW+ G+ + A FPGG Sbjct: 58 AFSSDNNFSGLATGNNSNGRFLGGVQVGADWQFAPTWVIGAEGQYSWLSGN-VGAAFPGG 116 Query: 60 YVYNNNQRGIGSITGRVGYTWGPGLIYVKGGYAYSDNNETVTLGGAPVGFALSDNHSNGW 119 +VY N+QRG+GSITGR GYTWGPGL+YVKGGYAYSDNNE VTL G +GFA + +H NGW Sbjct: 117 FVYTNSQRGLGSITGRFGYTWGPGLLYVKGGYAYSDNNEKVTLAGNQIGFATNGDHRNGW 176 Query: 120 TIGGGAEYMFAPNWSAKVEYQYYDFGDSRFTAPGALVPVGSFHNDEHTVKAGLNYRFNLG 179 T+G G EYMFAP+WSAK EYQYY+FG + FTAP LVP GSF D+HT KAG+NYRF Sbjct: 177 TVGAGIEYMFAPSWSAKAEYQYYNFGSATFTAPAGLVPTGSFTTDDHTFKAGVNYRF--- 233 Query: 180 NLGGPAYGRY 189 N G P RY Sbjct: 234 NWGAPVASRY 243 >ref|NP_767844.1| outer-membrane immunogenic protein [Bradyrhizobium japonicum USDA 110] dbj|BAC46469.1| outer-membrane immunogenic protein precursor [Bradyrhizobium japonicum USDA 110] Length = 241 Score = 234 bits (598), Expect = 3e-60, Method: Compositional matrix adjust. Identities = 118/181 (65%), Positives = 143/181 (79%), Gaps = 3/181 (1%) Query: 1 VFSQNNSFNGLSLSDS-DARFMGGVQGGYDWQLSPMWVIGVEGQYSWVGGHQLNAIFPGG 59 FS +N+FNGLS ++ + RF+GGVQ G DWQ +P +V+GVEGQYSW+ G + A+FPGG Sbjct: 57 AFSSDNNFNGLSTGNNGNGRFLGGVQVGADWQFNPNFVVGVEGQYSWLSG-SVGAVFPGG 115 Query: 60 YVYNNNQRGIGSITGRVGYTWGPGLIYVKGGYAYSDNNETVTLGGAPVGFALSDNHSNGW 119 Y N+QRG+GSITGRVGYTWGPGL+YVKGGYAYSDNNE VT+GG P GF + +H NG+ Sbjct: 116 VAYTNDQRGLGSITGRVGYTWGPGLLYVKGGYAYSDNNEKVTVGGVPTGFIIDGDHRNGY 175 Query: 120 TIGGGAEYMFAPNWSAKVEYQYYDFGDSRFTAPGALVPVGSFHNDEHTVKAGLNYRFNLG 179 T+G G EYMFAPNWSAK EYQYY+FGD+ FTA G L G+F D+HT KAG+NYRFN Sbjct: 176 TVGAGLEYMFAPNWSAKAEYQYYNFGDAHFTA-GPLAGTGNFTTDDHTFKAGVNYRFNWA 234 Query: 180 N 180 N Sbjct: 235 N 235 >ref|YP_576943.1| OmpA-like transmembrane region [Nitrobacter hamburgensis X14] gb|ABE62483.1| OmpA-like transmembrane region [Nitrobacter hamburgensis X14] Length = 238 Score = 194 bits (494), Expect = 4e-48, Method: Compositional matrix adjust. Identities = 102/177 (57%), Positives = 123/177 (69%), Gaps = 2/177 (1%) Query: 12 SLSDSDARFMGGVQGGYDWQLSPMWVIGVEGQYSWVGGHQLNAIFPGGYVYNNNQRGIGS 71 SLS SD RF+GGVQGG D+Q + WV+G E QYSW+ + A+FPGG + N RG+GS Sbjct: 62 SLSGSDGRFLGGVQGGADYQFANNWVLGAEAQYSWLTNNNGGAVFPGGNIVTGNDRGLGS 121 Query: 72 ITGRVGYTWGPGLIYVKGGYAYSDNNETVT-LGGAPVGFALSDNHSNGWTIGGGAEYMFA 130 +TGR+GY WGP L+Y KGGYA+ D+ VT G P+ FA + N NG+T+G G EYMFA Sbjct: 122 VTGRLGYAWGPTLLYAKGGYAFRDSRLGVTDAAGVPLAFATTGNRDNGYTVGAGLEYMFA 181 Query: 131 PNWSAKVEYQYYDFGDSRFTAPGALVPVG-SFHNDEHTVKAGLNYRFNLGNLGGPAY 186 PNWSAKVEYQYY+FG + F A VG SF ND+HTVKAGLNYRF G P Y Sbjct: 182 PNWSAKVEYQYYNFGKTTFAAGSPTDIVGTSFRNDDHTVKAGLNYRFGWGGPVAPHY 238 >ref|YP_485815.1| putative outer membrane protein [Rhodopseudomonas palustris HaA2] gb|ABD06904.1| putative outer membrane protein [Rhodopseudomonas palustris HaA2] Length = 237 Score = 194 bits (493), Expect = 5e-48, Method: Compositional matrix adjust. Identities = 95/178 (53%), Positives = 125/178 (70%), Gaps = 4/178 (2%) Query: 13 LSDSDARFMGGVQGGYDWQLSPMWVIGVEGQYSWVGGHQLNAIFPGGYVYNNNQRGIGSI 72 L RFMGGVQGG+D+Q +P WV+G+E QYSW+ + IFP G N RG+GS+ Sbjct: 63 LQSDSGRFMGGVQGGFDYQFAPNWVVGLEAQYSWMASNNTGVIFPAGSTATENTRGLGSV 122 Query: 73 TGRVGYTWGPGLIYVKGGYAYSDNNETV-TLGGAPVGFALSDNHSNGWTIGGGAEYMFAP 131 TGR+GYTWGP L+Y KGGYA+ D++ V T GG P ++ S + ++G+T+G G EYMFAP Sbjct: 123 TGRIGYTWGPALLYAKGGYAFRDSSLGVATAGGIPAAYSTSGSRNDGYTVGAGLEYMFAP 182 Query: 132 NWSAKVEYQYYDFGDSRFTAPGALVPVGSFHNDEHTVKAGLNYRFNLGNLGGPAYGRY 189 +WSAKVEYQYY F ++ FT+ A + +F ND+HTVKAG+NYRF GGPA +Y Sbjct: 183 SWSAKVEYQYYKFDNTAFTSGPADMVGTTFRNDDHTVKAGINYRF---GWGGPAVAKY 237